KEGG   Leucoraja erinaceus (little skate): 129701415
Entry
129701415         CDS       T09122                                 
Name
(RefSeq) F-box/WD repeat-containing protein 11 isoform X1
  KO
K03362  F-box and WD-40 domain protein 1/11
Organism
leri  Leucoraja erinaceus (little skate)
Pathway
leri04114  Oocyte meiosis
leri04120  Ubiquitin mediated proteolysis
leri04218  Cellular senescence
leri04310  Wnt signaling pathway
leri04340  Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:leri00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    129701415
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    129701415
   04340 Hedgehog signaling pathway
    129701415
 09140 Cellular Processes
  09143 Cell growth and death
   04114 Oocyte meiosis
    129701415
   04218 Cellular senescence
    129701415
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:leri04121]
    129701415
   03036 Chromosome and associated proteins [BR:leri03036]
    129701415
Ubiquitin system [BR:leri04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     129701415
Chromosome and associated proteins [BR:leri03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     129701415
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_IFT122_1st Beta-prop_THOC3 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_TEP1_C Beta-prop_TEP1_2nd DSE1_N EIF3I WD40_MABP1-WDR62_2nd Beta-TrCP_D WD40_Gbeta Beta-prop_EML_2 Beta-prop_SCAP Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR75_1st Beta-prop_EML WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_WDR41 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 CFAP251_N ANAPC4_WD40 Beta-prop_Aladin WDR90_beta-prop_4th F-box-like WD40_MABP1-WDR62_1st Beta-prop_DCAF12 Beta-prop_IP5PC_F Beta-prop_SPT8 PAC11 NBCH_WD40 ASA1 Beta-prop_DCAF4 Beta-prop_VPS8 Beta-prop_HPS5 WD40_like Beta-prop_IFT140_1st F-box Beta-prop_NOL10_N Beta-prop_WDR11_2nd Beta-prop_WDR19_1st Beta-prop_Nup120_160 WD40_RFWD3 PEP5_VPS11_N eIF2A WD40_2 DUF7899 DUF4508 DUF6188
Other DBs
NCBI-GeneID: 129701415
NCBI-ProteinID: XP_055498543
LinkDB
Position
11:2495514..2667279
AA seq 562 aa
MEADSVIEDKTIELMCSVPRSLWLGCSNLVESMCALRCLQSMPSVRCLQNTSVMEDQNED
ESPKKNTVWQITNGPPSMIVPRKRPSGNYEKEKDLCIKYFDQWSESDQVEFVEHLISRMC
HYQHGHINSYLKPMLQRDFITALPAQGLDHIAENILSYLDAKSLCAAEVVCKEWQRVIGE
GMLWKKLIERMVRTDPLWRGLAERRGWEQYLFKNRPADGPPNSFYRGLYPKIIQDIETIE
SNWRCGRHNLQRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWDKQSLECLKILTGHT
GSVLCLQYDERVIVTGSSDSTVRVWDVNTAEVLNTLIHHNEAVLHLRFSNGLMVTCSKDR
SIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLN
GHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGA
YDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWDFL
NVPSNNQNETRSPSRTYTYISR
NT seq 1689 nt   +upstreamnt  +downstreamnt
atggaggcggactcggtcatcgaggacaaaaccatcgagctgatgtgttctgtgcccagg
tctttgtggctaggctgctccaacctggtagagagcatgtgcgcactgagatgcctgcag
agcatgcccagtgtcagatgtctccagaatacatcggttatggaggatcagaatgaagat
gagtctccaaagaagaatacggtttggcagatcacaaatgggcccccttccatgatagtc
cccagaaagaggccttcaggaaactacgaaaaagagaaggatttgtgtattaaatacttt
gaccagtggtctgaatcagatcaggtggaatttgtggagcacctaatctcccggatgtgc
cattaccagcatggacatattaactcctatctgaaaccgatgttgcagcgggatttcatc
actgctttaccagcccaaggattggaccatatagcagaaaacatcctatcgtacctggat
gctaagtcgctgtgcgccgctgaggtggtgtgcaaagaatggcagagggtgattggtgag
ggaatgctgtggaaaaaactcatcgaaagaatggtacgcacggacccactgtggagggga
cttgcagagaggaggggatgggaacaatacctgttcaaaaatcgtcctgctgatggtcca
ccaaattcattttacagaggattgtacccaaagattatccaggatatagagaccatagaa
tccaattggaggtgcgggcggcataaccttcagagaatccagtgtcggtcagaaaacagc
aaaggtgtttactgtctccagtatgacgatgaaaaaataatcagtggtttgagagataac
tcaatcaaaatttgggataaacagtcgttggaatgtttgaaaatactaacaggtcacaca
ggctctgtgctttgtctgcagtacgatgagcgagttattgttactgggtcttcagactct
acagtaagggtctgggatgtcaatacagcagaggtcctgaacacactgatacatcacaat
gaagctgtattacaccttcggttcagtaatggattgatggttacatgctcaaaggacaga
tcgatagctgtgtgggacatggcctctccgactgacatcactctgagacgggttctcgtt
ggccatcgggcagcagtcaatgtagtggacttcgatgacaagtacattgtatcagcatcg
ggtgaccgaactattaaagtgtggagcacaagcacttgtgaatttgtacgtaccttgaac
ggccacaagcgtggaatagcgtgccttcaatatcgggatcgattggttgtcagcgggtcc
tcggacaacaccatcaggttgtgggacatagaatgtggtgcttgtctgcgggtcttagaa
ggacacgaagagttggttcgatgtattcgcttcgataacaagaggattgtgagtggagct
tatgacggcaaaataaaagtatgggacctgcaagctgcgcttgatcctcgtgccccagct
agtacattatgtctacgcaccttggtggaacactctggccgggtatttcgactgcagttt
gatgaatttcagattatcagtagttcccatgatgacaccattctgatctgggatttcttg
aatgtgccatcgaataaccagaatgaaactcgctctccatcaaggacgtacacctatatc
tcaagataa

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