Leucoraja erinaceus (little skate): 129701417
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Entry
129701417 CDS
T09122
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1
KO
K03265
peptide chain release factor subunit 1
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129701417
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
leri03019
]
129701417
03012 Translation factors [BR:
leri03012
]
129701417
Messenger RNA biogenesis [BR:
leri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
129701417
Translation factors [BR:
leri03012
]
Eukaryotic type
Release factors
129701417
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
129701417
NCBI-ProteinID:
XP_055498548
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Position
11:complement(3196139..3244018)
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AA seq
437 aa
AA seq
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MADDPTAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTAS
NIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPI
NTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGTGALFGTLQGNTREVLHKFTVDLPKKH
GRGGQSALRFARLRMEKRHNYVRKVAETAVQLFISSDKVNVAGLILAGSADFKTELSQSD
MFDPRLQSKVLKLVDISYGGENGFNQAIELSAEVLSSVKFIQEKKLIGRYFDEISQDTGK
YCFGVDDTLKALEMGAVEILIVYENLDIMRYVLRCHGTEEEKILYLTPEQEKDKSHFTDK
ETGQEHELIESMPLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIGGILRYRVDFQ
GMEYQGDEDDFYDLDDY
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgacccgaccgcagccgacaggaacgtggagatctggaagatcaagaaactc
atcaaaagcctggaggccgccagagggaatggcactagtatgatttcactcatcattcct
cccaaagaccagatctcacgagtagcaaaaatgttggcggatgaatttggcactgcctca
aacatcaaatcacgagtgaatcgtctatctgtgctaggggccattacgtctgtgcagcag
cgtcttaaactatacaacaaagtaccgccgaatggtttggttgtctactgtggaacaatt
gtaacagaagaaggcaaagaaaagaaagttaacattgattttgagcccttcaaaccaatt
aatacatccttatatctttgtgacaataaatttcatacagaggctcttactgcgcttcta
tcggatgacagcaaatttgggttcatcgtaattgatggtactggagctttgttcggtact
ctacagggaaacacacgggaagtactacacaaattcacagtggatctaccaaagaagcac
ggcagaggagggcagtctgccctgcgttttgctcgcctacgaatggaaaagaggcataac
tatgtacggaaagtagcagagacagctgtacagctcttcatcagtagtgacaaggtgaac
gtggcaggtcttatcctggctggatcagctgatttcaaaactgagctcagtcagtccgac
atgtttgacccgcgattgcagagcaaagtactaaaactggtggacatctcctatggaggt
gagaatggttttaatcaagcaattgagctgtcagctgaagtcttatccagtgtgaagttc
atccaggagaagaaactaatagggcgatactttgatgaaattagccaagatacagggaag
tactgctttggagtagatgacacacttaaagcattggagatgggtgcagttgagatcctg
atagtttatgaaaatctggatattatgcgatacgtactacgctgtcatggcacagaagaa
gagaaaatcttgtatctgacacctgaacaagagaaggataaatcccatttcacggacaaa
gagactggacaggaacatgagctgatagaaagcatgcccctcctggaatggtttgccaac
aactacaaaaaatttggagctacactggagattgttacagacaaatcgcaggaaggatcc
cagtttgtgaaaggctttggtgggattggtggtattctacgataccgtgtggactttcaa
ggaatggagtaccaaggagatgaggacgacttttatgacctggatgactactag
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