Leucoraja erinaceus (little skate): 129701422
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Entry
129701422 CDS
T09122
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri03015
mRNA surveillance pathway
leri04261
Adrenergic signaling in cardiomyocytes
leri04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129701422
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
129701422
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
129701422
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
leri01009
]
129701422
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
leri03019
]
129701422
03036 Chromosome and associated proteins [BR:
leri03036
]
129701422
Protein phosphatases and associated proteins [BR:
leri01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
129701422
Messenger RNA biogenesis [BR:
leri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
129701422
Chromosome and associated proteins [BR:
leri03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
129701422
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML_2
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
129701422
NCBI-ProteinID:
XP_055498559
LinkDB
All DBs
Position
11:3862135..4427505
Genome browser
AA seq
443 aa
AA seq
DB search
MEEDIDTRKINSSFLRDHNYATEADIISTVEFNSTGELLATGDKGGRVVIFQREQESKNQ
SHRRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQQNAAYFLLSTNDKTVKLWKI
SERDKRPEGYNLKDEDGRIKDPSTITTLRVPVLRPMDLMVEASPRRVFANAHTYHINSIS
VNSDYETYMSADDLRINLWHLEITNRSFNIVDIKPANMEELTEVITAAEFHPHQCNMFVY
SSSKGTIRLCDMRASALCDKHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRD
YLTVKVWDLNMENRPLETYQVHEYLRSKLCSLYENDCIFDKFECVWNGSDSVIMTGSYNN
FFRMFDRNTKRDVTLEASRENSKPRAILKPRKVCMGGKRKKDEISVDSLDFSKKILHTAW
HPSENIIAVAATNNLYIFQDKVN
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggatattgacacccgcaaaattaacagcagttttctgcgcgaccataactat
gcaactgaagccgatattatttctacggtagaattcaacagcacaggagaactgttagcg
acaggggacaaggggggtcgagttgtaatatttcagagggagcaggagagcaaaaatcag
tcccatcgcagaggggagtataatgtttacagcactttccagagccatgaaccagagttt
gactatctgaagagtcttgagatcgaggagaagataaataaaatcaggtggctgccccag
cagaatgcagcctactttcttctctcaaccaatgataagacagttaaactgtggaagatc
agtgagcgggacaagaggccggaaggatacaacctgaaggatgaagatggtagaatcaaa
gacccctccacaatcactaccctgcgggtgccggtgctgagacccatggacctaatggtg
gaggccagtccgaggagagtgtttgccaatgctcacacgtatcacatcaactccatttcc
gttaacagcgactatgagacctacatgtcagctgatgacttgaggataaacctttggcac
cttgagattaccaaccggagtttcaatattgtagatataaagcctgccaacatggaggag
ttgaccgaggtgatcacagcagcagaattccacccgcaccagtgtaatatgtttgtgtac
agcagcagtaaaggaacaatccgactgtgtgacatgcgggcatcagcactgtgcgacaag
cattcaaagctttttgaagagccagaagaccccagcaatcggtcgttcttctccgagatc
atctcctcgatatcggacgtgaagttcagccatagtgggagatatatgatgacaagggat
tacctcaccgtcaaagtctgggacttgaacatggagaacagaccgttggaaacatatcag
gtgcatgaatacctgaggagtaagctgtgttccctctatgaaaatgactgcatctttgac
aagtttgagtgtgtatggaatggctctgacagtgtgatcatgactggctcgtacaacaac
ttcttcaggatgtttgatcgcaacacgaagcgggacgtcacgctggaagcttcgcgggaa
aacagcaagcctcgagctatcctcaaaccccgtaaagtgtgcatgggtggcaagaggaag
aaagacgaaattagtgtcgacagtttggacttcagtaagaagattctgcacacagcatgg
cacccttcagagaacataatagcagtggcggccacaaacaacctctatatattccaggac
aaagtgaactag
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