Leucoraja erinaceus (little skate): 129701464
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Entry
129701464 CDS
T09122
Symbol
g3bp1
Name
(RefSeq) ras GTPase-activating protein-binding protein 1 isoform X1
KO
K17265
Ras GTPase-activating protein-binding protein 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
129701464 (g3bp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
leri03019
]
129701464 (g3bp1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
leri04147
]
129701464 (g3bp1)
Enzymes [BR:
leri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
129701464 (g3bp1)
5.6.2.5 RNA 5'-3' helicase
129701464 (g3bp1)
Messenger RNA biogenesis [BR:
leri03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
129701464 (g3bp1)
Exosome [BR:
leri04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
129701464 (g3bp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NTF2
RRM_1
RRM_7
NXF_NTF2
Motif
Other DBs
NCBI-GeneID:
129701464
NCBI-ProteinID:
XP_055498633
LinkDB
All DBs
Position
11:complement(12799814..12831611)
Genome browser
AA seq
478 aa
AA seq
DB search
MVMEKPSPLLVGREFVRQYYTLLNQAPDYLHRFYGKNSSYVHGGLTSNGDPAEAVYGQAE
IHKKVMSLQFRDCHTKIKHVDAHATLNDGVVVQVMGELSNNRQPMRRFMQTFVLAPEGSV
ANKFYVHNDIFRYQDEVFGDSDTEPPEESEEEVEEPEEQQPSPEAVQDDSGVYYDPAVSN
GLEEPLEEHIVVSEPEPEPTVEEVKPEPILEEEVTEEPVVKSPSPPPADPAPVVTEDSRT
FSWASVTSKNLPPSGIVPTTGIPPHVVKAPTPQPRPETKPEIQIPAPRPRDQRIRERQGM
PPRGPRPGRSENETGETEPRRTIRYPDSHQLFVGNLPHDIDETELKEFFTGYGNVVELRI
NTKSSGGKLPNFGFVVFDDPEPVQKILSSKPIKFRGELRLNVEEKKTRPIREGERRGDDR
RENRPRGPGGPRGGLGGGMMRDREGRGGLSRGGLTQKPGPGTGRGGGQGESRFAGPRH
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggtgatggagaagccaagtcccctgcttgtcgggcgggaatttgtgagacagtattac
acactgctgaaccaggcccctgattatttacataggttttatggaaagaattcttcatat
gttcacggtggtttgacttcaaatggagatccagcagaagcggtgtatggacaagcggaa
atacacaagaaagttatgtctcttcagttccgagattgccacacaaaaattaaacatgtg
gatgctcatgctacgctaaatgatggggtggtagtacaggttatgggtgagctgtcaaac
aacagacagcccatgaggcgcttcatgcagacatttgtccttgcacctgagggttcagtt
gcaaacaaattttatgttcacaatgatattttccgctatcaagatgaagtctttggggat
tcggatactgagcctcctgaagagtctgaggaagaagtagaggaaccggaagaacagcag
ccatcaccagaagctgtccaagatgatagtggagtgtactatgacccagctgtgagtaat
ggtttagaggagcccttggaagagcatattgttgtatcggagccagaaccggagccaact
gtggaggaagtaaaacctgagcctattttggaagaggaagttactgaggagcctgtggta
aaatctccatcccctccccctgctgacccggcacctgttgtaacagaagattccaggact
ttttcctgggcttcagtgacaagtaaaaatctgccccctagtggcattgttcccactact
ggaattccacctcatgttgttaaagcccctacaccgcagccccggccagagacaaaacca
gaaatacagattccagcccctaggcctcgtgatcaaaggattagggaacggcaaggtatg
ccaccacgaggccccaggccaggtcgcagtgaaaatgagacgggtgaaacagaaccacgg
cgcacaatccgatacccggacagccatcagttatttgttgggaacctaccccatgatatt
gatgagactgagctaaaagaattcttcacaggttatggcaatgtggtggagctccgcatt
aacactaagagtagtggtggaaagttgcccaactttggttttgttgtatttgatgatcct
gagcctgttcagaagatcctgagcagcaagcccattaaattcagaggggagctgagacta
aatgtggaggagaagaaaacacgacctattcgtgaaggtgaacgtagaggtgacgatcga
cgggaaaatagaccaagaggacctggtggaccccgtggtggacttggcggtggaatgatg
cgggatcgtgagggtcggggtggcctatccagaggtggcctaacgcagaaaccaggacca
ggaactggaagaggtggtggacaaggagagtcccgtttcgctggcccacgtcactga
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