Leucoraja erinaceus (little skate): 129701486 Help Entry 129701486         CDS       T09122                                  Symbol rad50 Name (RefSeq) DNA repair protein RAD50   KO K10866   DNA repair protein RAD50 [EC:3.6.-.-] Organism leri  Leucoraja erinaceus (little skate) Pathway leri03440   Homologous recombination leri03450   Non-homologous end-joining leri04218   Cellular senescence Brite KEGG Orthology (KO) [BR:leri00001]  09120 Genetic Information Processing   09124 Replication and repair    03440 Homologous recombination     129701486 (rad50)    03450 Non-homologous end-joining     129701486 (rad50)  09140 Cellular Processes   09143 Cell growth and death    04218 Cellular senescence     129701486 (rad50)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:leri03032]     129701486 (rad50)    03400 DNA repair and recombination proteins [BR:leri03400]     129701486 (rad50) DNA replication proteins [BR:leri03032]  Eukaryotic type   DNA Replication Termination Factors    MRN complex     129701486 (rad50) DNA repair and recombination proteins [BR:leri03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     MRN(MRX) complex      129701486 (rad50)     BRCA1-C complex      129701486 (rad50)    NHEJ (non-homologous end-joining)     MRX complex      129701486 (rad50) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA_23 Rad50_zn_hook AAA_21 SbcC_Walker_B AAA_15 SMC_N ATG17_like AAA_29 AAA_24 zf-met AAA_16 AAA_22 Motif Other DBs NCBI-GeneID:  129701486 NCBI-ProteinID:  XP_055498671 LinkDB All DBs Position 11:complement(14671775..14819235) Genome browser AA seq 1311 aa AA seqDB search MSKIEKMSILGVRSFGIDDKNKQIITFNTPLTVLVGPNGAGKTTIIECLKYICTGDFPPG TKGQTFVHDPKVANETDVRAQIRLQFRDVNGGMVAVQRSMLCTQKGKKTEFKTLEGVITR MKHGEKVSLSSKCAEMDREMISALGVSKAVLNNVIFCHQEDSNWPLSEGKALKQKFDEIF SATRYIKALDSLRQVRLKQSQNVREYQVELKYLKQNKEKAQEIQQQLTEKETQLAVSKEN VQSIENKIAPIEDRLSEIDKNLGKVMKLDMDIKSLESRKQQMEEDNRDLEEKMEQVFQGT DDQLRDKYNNHQRVVNEKERLLSDRQHEVERVNQRYQKLNRQKSEMLIVQGRLQVEADRQ QENIRRRDSLVHSLARHLELDGYERAPFSDRQFDSFRRQLNVRLEQEKEAANQLLREYTD KEAAKQRQVDDLRDKKTGLEQKIELKTDIQSKRQAELTNIKVGLQQLEGSSDRLQELEQE LNKAERDLDHAVASSNVAGLNTEVADLRKEKENLDRSLRKLDQEMETINTHTTTRTQLEM LQKDKADKEEQIRKIKSRHNEELTTLLGYFPNKKQLDDWLHAKDHEVNKTREKLFKLNKE LASADQNKNHITTDLRTKDQQLTTYEDKLFDVCGEQDFESNLYKLQDDIEKTSKQRAMLS GATAVYSQFISQLTEDNEPCCPVCQRDFPSEADLKDIIDDLQSKLRLIPDKLKSTELDLK KKESRRDDMMGLKPIRETVVELKEKDLPELRNKLQSINRDIQRLKSDMDDVETQLASFMS QERSAKSCLPDISHMERYQTDLRDVERKIAQQVAKLQGVNMNRTMQQVNLEKQEMSLQAD TVSNKMELKRKMIQDQQEQIQLLKSIVNEIRAEKLQIASNMQRRQQLEEQIVEYSTEIQS LQRDLQEFREQLSPIAATLGKLRQEKQELMEKKNNIYKEMQDKITEVKDKAKNINAYARE IEKYIEERKDEHKERKESELQDTTTQLNEAEKQREKMHKEMEGMRKDIDTQKLEERWLQD NLTLRKRMEELEIVETKRKEHLKEMGKMGVIQLRSERQKLEEQLDNFKKNRNQAQGRQKG FEEDILRCRKELREAQYRDAEEKYREKMIIIRTTELANKDLDIYYKALDQAIMRFHSMKM QEINKIIQDLWRSTYRGQDIEYIEIRSDADENVSAGDKRRNYNYRVVMVKGDTALDMRGR YSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSNQS NFQLLVITHDEDFVELMSRSQYVEHFYRVRKNMDQCSEIIRCDVSSLNTHV NT seq 3936 nt NT seq  +upstreamnt  +downstreamnt atgtccaaaattgagaaaatgagcattctgggtgtgaggagttttgggatagatgacaag aataaacaaattatcaccttcaacactccgttgaccgttctggtgggaccgaatggtgca ggtaaaacgactataattgagtgcttaaagtacatttgtacaggtgactttcctcctgga accaaaggacaaacatttgtgcatgatccaaaggttgccaatgaaactgacgtgcgggcc caaatccgtctccagtttcgagatgtgaatggcggaatggtggctgtgcagaggtcaatg ctttgcactcagaagggaaaaaagactgaattcaaaaccttggaaggggtgattacacga atgaagcacggcgagaaggtcagtttgagttcaaaatgtgcagagatggatcgtgagatg atcagtgccctgggtgtttcgaaagccgtgttaaataacgtcatattctgtcatcaagag gattcaaattggcctctgagtgaagggaaagctctgaagcagaaatttgatgagattttc tcagcaacgaggtacattaaggctctagattcacttcgtcaggtccgcctgaagcagtcg cagaatgtccgagagtaccaggtggagctcaagtacctgaagcaaaacaaggaaaaggcc caagaaatccagcagcagctgactgagaaagagacacagctggctgtttcaaaggaaaat gtccaatcgattgaaaacaagattgctcccatagaggatcgtttgtcagaaattgacaag aacctgggtaaagtgatgaagctggacatggacatcaaatctcttgaaagcaggaaacag caaatggaggaggacaatcgggatctggaagagaaaatggagcaggtcttccaagggacg gatgatcaacttcgggacaagtataacaatcaccagagagtcgtgaatgagaaagagagg ctgctaagtgatcgccaacatgaggttgaacgtgtgaatcaacgttaccagaaactcaac aggcagaagtcagaaatgctaattgtgcaaggacgacttcaggtcgaagcagaccgtcag caggaaaacatcaggagacgagactctctggtccactccctggccaggcatctggagttg gatggctatgagcgagcacctttcagtgatcgccagtttgatagtttccgtcggcagctg aatgtgaggttggaacaagagaaggaagcagccaatcaattactgagagaatacactgat aaagaagcagcaaaacaaaggcaggtcgacgatcttagagataagaagacaggattagag caaaaaatcgaactgaagacggacattcagagcaagaggcaagctgagctgacgaatatt aaagtgggtctgcagcaactggaggggtcttcagacagactgcaggaactcgagcaagag ttgaacaaagcggagcgggatctggaccatgctgtggccagcagcaacgtggcaggcctg aatactgaagtggcagatctacggaaagagaaggaaaatctggacaggtccttgcggaaa ctggatcaagaaatggagacaataaacacacacaccacaactaggactcagctagaaatg ctgcaaaaagacaaggctgacaaggaggaacagatcaggaagataaagtcaagacacaat gaggaactgacaacactgttgggctatttccccaacaagaagcagctggacgactggctc catgcaaaggatcacgaggtcaacaaaactcgggaaaagttatttaagttgaataaagaa ttggcttcagcagaccaaaacaagaatcacattactactgacctgcgaacaaaagatcaa cagctcactacctacgaagacaagctctttgatgtgtgtggagagcaggactttgaaagc aacttgtataaacttcaggatgatattgaaaagacatcgaagcaaagagccatgctttcc ggagcgacggccgtgtacagtcagttcattagccagctgactgaggacaacgagccctgc tgcccagtgtgccagcgtgattttccctctgaggctgatttgaaggacattatcgacgac ctgcagtccaaacttcgccttattcctgacaaattgaagtcgaccgaactggatctgaag aagaaagaaagtcggcgagatgacatgatgggacttaaaccaatcagagaaactgtggtt gaacttaaagaaaaggatttgcctgaattgcgaaataaactgcagagcatcaatcgtgat attcaacgcctgaaaagcgatatggatgatgtggagacgcagctcgcttccttcatgtca caggaacgctcggcaaagtcatgtctaccggacatatcacacatggagcgataccagaca gacctgcgagatgttgaacgcaaaattgcccagcaggttgccaagctccaaggggtaaac atgaaccgaacaatgcagcaggtcaatctggagaagcaagaaatgtcgctccaagcagat acggtttccaataaaatggaactgaagaggaaaatgattcaagatcagcaggaacagatc cagttactgaagagcatcgtcaatgagatccgagctgagaaactccaaatcgccagcaat atgcagcgacgccaacagttggaagagcagattgtggaatattccactgagattcagtcc ctacaaagagatttgcaagaatttagggaacagttatcgccaatagctgcaactctgggt aaactacgacaagaaaaacaggagttgatggagaaaaaaaataacatctacaaggagatg caggataagataactgaagtcaaagacaaagcgaaaaatattaatgcttatgcaagagaa attgaaaaatacatcgaggaaagaaaagatgaacataaagagcgaaaagagtctgagctt caagataccaccactcaactaaatgaagctgagaaacagcgggagaagatgcacaaagaa atggaggggatgcgaaaggacatcgatactcaaaaacttgaagagcggtggctgcaagat aatttgacattacgtaagaggatggaagaattggaaattgtagagaccaagaggaaggaa catctgaaagaaatgggaaagatgggagtgattcagctccggagtgagcgccaaaagctg gaagaacaacttgacaatttcaaaaagaatcgcaatcaggcccaagggaggcagaaaggg tttgaagaggatattcttcgctgcagaaaggagttgagagaagcccagtatagagatgct gaggaaaagtacagagaaaagatgatcatcatacggacaacggaattagctaacaaggac ctcgatatttactacaaggcactggaccaagccattatgagattccacagcatgaagatg caagaaattaacaaaatcatccaagacctgtggcggagcacctacagaggccaagatatc gaatacattgagatccgttctgacgcggatgaaaacgtatctgccggtgacaaaaggaga aattacaattaccgtgtggtaatggtgaagggagatacagcactggacatgagaggaaga tacagtgccggacagaaggttcttgcctcgctcattatccgcttggcattggcagagacc ttttgcctgaactgtggaattcttgcgctggacgagccaaccacaaacttagaccgggaa aacattgaatctctggcccatgctctggtggagataataaagagccgctcaaatcaaagc aactttcagcttctggtgatcacacacgatgaagattttgtggagctcatgagtcgttcc cagtatgtcgaacacttctaccgagtccggaagaacatggaccaatgttcagaaatcatt agatgcgacgtcagctctctgaacacccatgtctag

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