Leucoraja erinacea (little skate): 129701513
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Entry
129701513 CDS
T09122
Name
(RefSeq) protocadherin-10-like isoform X1
KO
K16499
protocadherin delta 2
Organism
leri
Leucoraja erinacea (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
leri04515
]
129701513
Cell adhesion molecules [BR:
leri04515
]
Cadherins
Protocadherins
129701513
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_3
Motif
Other DBs
NCBI-GeneID:
129701513
NCBI-ProteinID:
XP_055498736
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Position
11:complement(21322256..21427886)
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AA seq
895 aa
AA seq
DB search
MLTGKRPWPLTRQVLCFITMSCFTDLISGQIRYTIPEELKHGAFVGNVADDLGLDVRKLS
ARRLRIVTAAPKQYLEVNLGNGILFVNEKIDREQLCGPSFNCFLHLEIVIENPLELYRIE
VEIMDINDNSPSFLKKDLSLEIIESALPGTRFPLESAHDPDVGTNSIRTYRLSPNDHFTL
DVETRSDYSKYAELVLEKALDREQQQIHQLILTAVDGGIPVRSGSAVISVIVLDANDNQP
VFEQTTYKVSLEENATKGTLVLKLNASDLDEGSNGAITYSFSRHTPPRVQQLFTVDSHTG
EIRVKSVIDHEEVDNYEFYIQAKDKGGSYAIPAHCKVLVRILDLNDNAPEVILTSLSSPV
MEDAMVGTVIALISVTDIDSGKNGHIDCVISQDVPFKIQSSFNNHYTLMTAEPLDREKVS
EYNITITATDSGYPSLSTNKTILLKVSDVNDNAPRFSKPSYTVYVTENNPPGATVCSVTA
LDPDSNQNSYLSYSILDRMIQGLPSRTYVSINSDNGKVYALRSFDYEQLKEFQIQILAQD
TGFPPLSSTVKVNVVILDQNDNVPAILSPRPNNGSAALQTVRRTADAGQLVSKIIATDAD
SGQNAKLSYKLLQATDPTLFNVAVHTGEIRTTRRFGERDASKQRLLILVKDNGQAPLSAT
ATIIFSIMDIITDILPEISNLSENTQENSSLTFYLIISLGSFSFLFIVAIVVISAIKCHQ
YRNNGRDRSSPFGNCCCLRHFHSPDILKTSSINLQVTANSKVPSDFLDAGGNGAASQMYY
YRVCLTPESAKSDFTFLKPCSPATSMAGNRKGDTSGMEWNALKSLNNDVSESNCKVKAMK
NREWDGNAASQICSNRQWDMEQSSMEMYPSGQYNLGENEVEPDHRRFMEIHSHAL
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atgttgactggaaagagaccatggccactaacaaggcaagtgctctgttttataacgatg
tcctgtttcactgatttgatttctggacagattcgctatacaattccggaagaactgaaa
cacggggcttttgttgggaacgtggctgatgatttgggtttagacgttcgtaagctatcg
gccagaaggctgcgcatagttaccgccgctccaaagcaatatttggaggtaaatttgggt
aatggcatcctgtttgtgaatgagaagatagatagagaacagctctgtggtccgagcttc
aactgttttctccatctggaaattgttatcgaaaatccccttgaactgtaccgtattgaa
gtggaaattatggatataaatgataactccccaagtttcttgaagaaggatctatctttg
gaaattatagaatcagctttgccgggcacacgtttccctctcgagagtgcacacgatccc
gacgtgggtactaattcaatccggacctataggctaagtccaaatgatcattttacactc
gacgtggagacgcggagcgattacagcaaatatgccgagttagtgctggagaaagcattg
gaccgagagcaacaacagatccatcaactaattctgactgccgttgacggcggcatccca
gtccgatccggcagcgctgtcatttccgttattgtgttagacgccaacgacaatcaacct
gtcttcgagcagacaacttataaagtttctttggaagaaaatgcaacaaaggggacgttg
gtgttaaaactaaacgccagcgacttagatgaaggctccaacggggcgataacatattcc
ttcagtcggcatactccccctagagtgcagcaactgtttactgtggattcccacacaggt
gaaattagagtaaaaagtgttatcgatcacgaggaagtggataattatgaattctatata
caagccaaggataaaggcggctcatatgcaatacctgcacattgcaaagttctagtacgt
atcctagatctaaacgataatgcccctgaagtgatactgacttccctgtccagtcctgtc
atggaagacgcgatggtcgggacagtaatcgctctcatcagtgttaccgacatagattcc
ggaaagaatggacatatcgactgcgtgatatctcaggacgtcccatttaaaattcagtcg
tccttcaataatcattataccttgatgacagccgaacctctggaccgagaaaaagtctca
gagtataatatcaccattaccgccactgattctggatatccttccctttctaccaacaag
actatacttttaaaggtctcggacgtgaatgacaatgcgccacggttttcgaagccatcc
tacacagtatatgtcactgagaataatccaccgggtgccactgtttgctcggtgaccgca
cttgaccctgattctaatcaaaactcttatttgtcctattctatactggaccggatgatt
caaggattgccctcaagaacctacgtttcaatcaactccgataatgggaaagtttacgcg
ttacgctcctttgactacgagcaactcaaggaatttcaaatccagatcctagctcaggat
actggattcccgccacttagtagcaccgtcaaagtgaatgtagttatcttggatcagaat
gataacgtccccgctattctgtcaccgcggccaaacaacggttcagcggcacttcagaca
gtccggcgaacagcggacgcaggacaacttgtgagcaaaataattgctacagatgctgac
tcggggcagaacgctaaactgtcctataagctactgcaagccacagatccaactctgttc
aacgtagcagtccatacaggagagataaggacaacccgacgtttcggtgaaagagacgcc
tctaagcaaaggcttctcatcctcgtgaaggacaacgggcaggctccactttcagctacc
gccaccatcatattttcaataatggacatcatcacggacattcttcctgaaatcagcaac
ttgtctgaaaatacacaagagaattccagcttaacgttctacttaatcattagcttagga
tccttctcgtttctatttattgtggccatagttgttatctctgccatcaaatgccaccaa
tataggaataatggtcgagaccgcagctctccttttgggaattgctgttgtcttcggcat
ttccattcgccagatattctgaaaacatccagcataaatctccaagttacagcgaattcc
aaagtgccgtctgattttttggatgcgggtggaaacggagccgcctcacagatgtattat
tatagggtctgtttgactccggaatctgcaaagagtgattttacttttctcaaaccgtgc
agtccagcaacatcgatggccgggaatagaaagggtgacacaagtggcatggagtggaat
gcactaaaatctttgaacaacgatgtgtcagagtcaaattgcaaagtcaaagccatgaag
aatcgtgagtgggatggaaatgcagccagccagatctgcagtaaccgtcagtgggatatg
gagcaatcttccatggaaatgtacccttctggacagtataatttgggtgaaaatgaagtg
gaaccggatcacagaaggtttatggaaatacattcccacgccttatag
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