Leucoraja erinacea (little skate): 129701514
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Entry
129701514 CDS
T09122
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-10-like
KO
K16499
protocadherin delta 2
Organism
leri
Leucoraja erinacea (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
leri04515
]
129701514
Cell adhesion molecules [BR:
leri04515
]
Cadherins
Protocadherins
129701514
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_3
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
129701514
NCBI-ProteinID:
XP_055498738
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Position
11:complement(21709652..21712172)
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AA seq
832 aa
AA seq
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MLQEACRRTLKRIVTPSIFLLCAWILVSGQLRYSIPEEENLGTIVGKIAEDLGLAVEELL
RRRFRIVSDSPPQYLDIDLTTGILFVTKTIDREELCPESLLCILPLEALIERPVEQYRAE
IEILDINDNSPRFPVSEIRLEIAEFAIPGARFPLPDAHDPDVGENSIRTYQLSPNDHFVL
DVQIRGEAKIPELILTNTIDRERQSLHRLLLTALDGGSPQRTGTTNVIINVLDGNDNAPV
FQQSFYVVGLMENVPSGTLVIKLHASDLDAGSNNDIAYSFSGYNKARVSELFAINAISGE
ITVKGILDFEETNKYEIDVEAKDMGFHPLSTHCTIQVNLNDVNDNAPDFAPSTIPKIVRE
DASTGTLLALINVRDRDSHANGHVDCTISPNHPFALKSSFKNSYRLVTDDILDRELASEH
KISITCKDRGSPPLSTTKMFIIHISDINDNAPMFQLSSYTVHVMENHPPGSSIGRVAATD
GDINLNSHLSYTILESEVQNAPLSSYVSINPETGVIYSQRAFDYEHLKNFQFRIQAQDSG
IPPLSNNVTVNVVILDQNDNPPVIKIPESSNYSMTAIPRSASPGYLAAKIIHSDADSGQN
ARIFYHILSATDSGLFTISRNSGEVRTARYFKDTDSIIQKIIIHVRDNGHPTLSATTTVT
FSVGEQIAELRSDFGDTSTHLQNSYDLPFVIVISLGLLSFILLVVIIALSVAIWPINRRP
TYARRRPCAACCYVGDLESERQIRNAHLNLQFASDPKMITNVLEVRKGGSLDTYHYRVRS
TAQGDATAFTTPFCPTTAESNEWNHGISADQLYAKETSDHTDKRKKVSSNLN
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgttacaagaagcttgtagacggacgctaaaaagaattgtgacaccgtccatctttctt
ctttgtgcctggattctcgtttcgggtcagcttcgttacagcattcccgaggaggaaaat
cttggaactatcgttggtaaaatcgcagaagatttagggctagccgtggaagaactacta
cgtcgcagatttcgtattgtttctgattcaccaccgcagtatctggatatagatctaact
actggaatattgtttgtgactaaaacgatagatagggaggaactgtgtccggaaagcctg
ctctgcatcctgcctttagaagctctaattgaacgtccagtggaacagtatcgcgctgaa
atcgagatattggatattaatgacaattctcccagattcccggttagtgaaatacgtttg
gaaatcgctgaattcgcgatacccggagcgcgttttccgttaccagatgcgcacgatccg
gacgtcggggaaaattcaattcgcacgtaccagctgtctccgaatgaccattttgtatta
gatgttcagatccgcggggaagcaaaaatcccggaattgatattgacgaacacgatcgac
cgagagagacaatcgctacatcgattactgctcacagctttggatggtggatctccgcaa
aggacgggcacgaccaatgtaattattaatgtgttggatggtaatgataatgcgccggta
ttccaacaatccttctatgttgtcgggctaatggaaaatgtgccatccggcactctggtg
atcaaacttcatgcaagcgatttagatgcgggatccaataacgacattgcttattctttc
agcggatataataaagcgcgggtgagcgaactgtttgccattaatgctatatcgggggag
atcacagttaagggaattttggacttcgaggaaacaaataaatatgaaattgacgtggaa
gcgaaggacatggggtttcaccctttatccacacattgcacgatccaagtgaatctcaac
gatgtgaacgataacgctcctgattttgccccaagtactattcctaagatagtacgggaa
gatgcgtcgactggaacattgctagctttaatcaatgtgagagacagggactctcatgca
aacggacacgttgattgcaccatctcaccaaatcacccgtttgctctcaaatcatcattt
aaaaattcatataggttggtgacagatgatatattggatcgagagctagcttctgagcat
aaaatctcaattacttgcaaggaccggggatctcctccgctatccaccaccaaaatgttt
atcatacacatttcagatattaacgataacgcaccgatgttccagctgtcgtcatacaca
gttcacgttatggaaaaccatccacccgggagttccatcggaagggtggctgctacggac
ggtgacataaacttgaactcccacctttcttatactatcctggagagcgaggtgcagaat
gcgcctttatcttcctatgtctcgatcaatcctgaaacaggcgttatctattcgcagcgg
gcatttgattacgagcatcttaaaaacttccagttcagaattcaagcgcaagacagtgga
atcccaccactttccaacaatgttactgtgaacgtggttatccttgatcagaatgacaat
ccacctgtgataaaaattccagagtcatcaaactatagcatgacagctataccacggtcg
gcaagcccaggatacctagcagccaagattattcattccgatgccgactctggtcagaat
gcacgcattttctatcatattctaagtgctactgattctggactgtttacaatttcccgt
aattcaggagaagttcgaacagctcgttatttcaaggacacggattccatcatacaaaaa
atcattatacatgtgagagacaatggccatcctacgctgtccgccacgactactgttacc
ttctcagttggtgaacagatcgcagaattacgttcagactttggagacacaagcacgcat
ttacagaattcatatgatttaccctttgttatcgtcatttctttggggctattatcattc
atacttctggtcgttataattgcgctatctgtcgcaatttggccgattaacagaaggcca
acctatgccagacgaagaccttgtgcggcatgctgctacgtcggtgacttggaatccgag
cgccaaatacggaacgctcaccttaatctgcagtttgcatctgatccaaaaatgattaca
aatgtcctggaggtacgaaagggcggctccctagatacataccactacagagttcgctcg
acagctcaaggagatgcaactgcgtttacgacaccgttctgtccaacaacagcagaatct
aatgagtggaatcacggaatttctgcggatcagctttacgcgaaagaaaccagtgatcac
actgataaacgtaaaaaagtaagtagcaacctcaactaa
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