Leucoraja erinacea (little skate): 129701519
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Entry
129701519 CDS
T09122
Name
(RefSeq) protocadherin gamma-A11-like
KO
K16499
protocadherin delta 2
Organism
leri
Leucoraja erinacea (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
leri04515
]
129701519
Cell adhesion molecules [BR:
leri04515
]
Cadherins
Protocadherins
129701519
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
RET_CLD1
TMEM154
Motif
Other DBs
NCBI-GeneID:
129701519
NCBI-ProteinID:
XP_055498742
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Position
11:complement(21721587..21728536)
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AA seq
799 aa
AA seq
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MANVDCTALCVVLLLRLTGLVCGQTKYSIPEELEIGAFVGNIAEDLGINVRELLVRRLQL
LPRDMNHYFAVNTQTGILSVNERIDREQFCMEASTCSISLDLAVEKPDVIFPAEVEILDI
NDNSPMFTADVISLQLSELLAPGARFPLESAHDPDVGLNSVAKYHLSLNDFFSIKVHTRK
DGSKIVDLFLEKSLDREKHPSFELVLTAEDGGIPHRSGTTKIFIIVTDINDNAPAFDQSI
YKITVLENVPVGTLLIKVHAIDLDEGSNAEFKYSFGNYASQKVRTLFNLDAETGEIKVAG
LLDFETAYEYELDVQAVDNLPNVGHAKVLVSIVDVNDNAPDIKLTSARKVVLEDAVTDTV
IAVFEVTDRDSGENGLVQCQIPVNIPFKMEPTLPNHYKIMTSKKLDRETISEYNISISAR
DAGSPSLTTIETITVSVSDINDNVPRFSKSSYDIYLMENNFPGGSVSSVTAVDPDLDDNG
NVAYSILDDKLENVRDASNFAINSQRGSIFALRSFDYEQTKNFQITILARDAGSPSLSST
AIVRVIILDQNDNIPFIISPATWNGTAAFAAVPRSIYPNYLVTKVVANDEDSGQNARLSY
EITEATDRNLFTMGLHNGEIRTTRTFTEGDGPTQKIVVLVKDNGQPSLSNTVTISLSITA
NSTESPSERTIQQKNVEHFPDLNTYLILILGSTSLLFLVIIILLVVFKCKQDRSNAIYQS
SATYCCCMRRNSDVAFQGRPVPNESLNYYRAGQVQANSDPYQYTVRLAPESSKSDFLFLS
TCHPTLPLNDISTDDLAFK
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgtggactgcacagcactctgtgttgtattgttacttcgtctcaccggtttg
gtttgcggacaaacaaaatactctattcccgaagaactggagatcggtgcctttgtcgga
aacattgctgaggatttggggataaatgttcgtgaattattagtccgaagactgcaactg
cttcctcgtgacatgaaccattatttcgcggtaaatacacagaccggaattttatctgtc
aacgagagaatcgacagagaacagttttgcatggaagcatcgacatgctccatttcgttg
gatctcgcggtggaaaaacctgatgtcatttttccagcggaggtggagatattagatata
aacgacaattcgccgatgttcacagccgacgtcatttctttgcaactgtctgaattactt
gcaccgggagcgcgcttccctctcgagagcgcgcacgacccggacgttggtttaaactct
gtcgctaaataccacctgagccttaatgattttttcagcattaaagttcatacaagaaaa
gatggaagtaaaatcgtggatctatttttagagaaatccttagaccgcgaaaaacatccg
tcttttgaattagtattgacggctgaagatggtgggatcccgcacaggtccggtactaca
aagatatttattattgttacagacataaatgacaatgcacctgcattcgatcaaagcata
tataagattaccgtattagaaaatgtacccgtaggcacactgctgataaaagtacacgca
attgatttagacgaaggttctaacgcagagttcaaatattcttttggtaattacgcctca
caaaaagtacggacgttgttcaatttggatgctgaaacgggcgagatcaaagttgcaggt
ttattggattttgaaacggcatatgaatatgaacttgatgtacaagctgtggacaacctg
ccaaacgtgggacatgctaaagttctggttagtatcgttgatgtgaatgataatgctccc
gacattaagctgacttcagcaaggaaagtggtactagaggatgcagtaacagacactgta
attgctgtttttgaagtaaccgatagggattctggagaaaacgggctcgttcagtgccaa
attccagtcaatattccatttaagatggaaccgactttgcctaatcactacaaaattatg
accagcaagaaacttgaccgtgaaacaatctcagagtataacatatccatttcagcacgc
gatgctggctcgccttcacttactacaattgaaaccatcacagtttcagtatctgatata
aatgataacgtcccacgtttctccaaatcttcatacgacatatatttaatggagaacaat
tttccgggcggttctgtttcttcggttaccgctgtggatcctgatctggacgataatgga
aacgtggcctattctattctggatgacaaactcgaaaacgtacgcgacgcttccaacttt
gcaataaattcgcaacgcgggagcatatttgctctgcgttcttttgactatgaacaaacg
aagaatttccaaataacaattttagctcgtgatgctggatccccgtcactaagcagcact
gctattgtgagagttattatcttggatcaaaacgacaatattccttttataatttcgcca
gccacgtggaacggtaccgcggctttcgccgctgtaccgcgctctatatatccaaactac
ttagtcaccaaagtagtcgcaaacgacgaagattcagggcagaacgcgcggctttcctat
gagattacagaggccactgatcgcaatcttttcaccatgggtcttcacaatggagaaatc
agaacaacccgaactttcacagaaggcgatggccccacacagaaaattgtggtcttagtg
aaggacaatggtcaaccaagtctttcaaacacagttacaatcagtttatcaatcactgcg
aacagtaccgaaagcccttcggagcgtacaattcaacagaaaaatgtggaacattttccg
gatctcaatacatatttaatattaattctaggatcaaccagcctcttgtttctcgtaata
atcatcttattggtggtcttcaaatgcaaacaagatcggagtaatgctatttaccagagc
tctgcaacgtattgttgctgtatgcggagaaattccgatgtcgcatttcagggaagacct
gtcccaaatgaatcactaaattattatagagctgggcaggtgcaggctaattcagatcct
tatcaatatacggttcgattagcgccggaatcgtccaagagcgatttcctgtttctatcg
acttgccatccgacattgccactaaatgacatcagcacggatgatttagcatttaagtag
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