Leucoraja erinacea (little skate): 129701521
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Entry
129701521 CDS
T09122
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-10-like
KO
K16499
protocadherin delta 2
Organism
leri
Leucoraja erinacea (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
leri04515
]
129701521
Cell adhesion molecules [BR:
leri04515
]
Cadherins
Protocadherins
129701521
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Stc1
Motif
Other DBs
NCBI-GeneID:
129701521
NCBI-ProteinID:
XP_055498744
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Position
11:complement(21756482..21760072)
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AA seq
798 aa
AA seq
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MATAASDAVHFISLLILSGHVAGRIRYSIQEELEQGAFVGNIAEDLNIGISELWTRRFRL
ISDDTKKYLSLNLENGILFVSERIDREQVCGEHSLCSLAYKISLDNPPEMHSVAVEIIDV
NDNPPRFSKGEFSLRISEVLAPGARFPLESAHDPDVGTNTISTYQISTNEYFDLKLQKRS
NGDVIAELSLEKSLDREEQPTFYLVLTAIDGGIPQRTGTAQIIITVVDANDNAPVFDHEL
YRANIRENTPKGTLVTKVSAADLDEGTNGDFVYSFTSHTSPSTRELFNLDPVTGEIRVEE
VLDFEKAHIYELGVEATDKGPYALVGHTKVMVRLIDMNDNAPEIEVVSSSNTVPEDAQIG
TMLAEISVSDPDSGENGQVQCGVDKNLPFKLQKISSNNYNLVTSDALDRETVSVYNISIS
SWDRGSPPLSASKHILITVSDVNDNAPRFTQSTYNVFIMENNRPGASIFAVTALDADLDL
NGMLTYSMVDSRIQDVSATHIVTINSKSGNVFAVRPFDYENLKQFRIKVKAEDAGFPKLS
STGIVNVIILDQNDNAPVIDSPLMWNNTASLEIARQSLYPGYLVTKIIASDADSGQNMRL
SFQILEATDKSLFNIGPHSGEIKTVRNLKIEDATNQRMVIHVMDNGQPRLSSTITIIVSV
LANITEKMSSELHQHRNVSQFSGPNVYLIIIFGSTSVIFLAIIILLLLLKCKQNRTNNVD
ETRCCFPCSKWHSTDAFNRRAVLHEGLRYSGAAPTLPLSGTCHYAVGLSSESSKCDFLFL
KPTLNSNYMNTRSTIGRE
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgcagccagcgacgcggtgcattttatctctctgctcattctgtcgggccat
gttgcgggacgaattcgctactctattcaagaggagctggagcaaggggcatttgttggt
aatatcgccgaggatttaaacattgggatttcggaattgtggacaagaaggtttcgtctg
atttccgatgatacgaaaaaatatctgtctctaaacctggaaaatgggattttatttgtc
agtgagcgaattgacagggaacaggtttgtggcgaacactctctttgttcccttgcctac
aaaatatcgctggataatcctccggaaatgcacagtgttgccgtggaaataattgatgta
aatgacaatccacctcgcttttctaaaggcgaattttctttacggattagtgaagtactt
gcaccaggagcgcgcttcccacttgagagcgcgcacgatccggatgtgggcacaaacact
atcagcacttaccagattagtacaaatgaatactttgatctcaaattgcagaaaagaagt
aatggagacgtaatcgccgaattatcattggaaaaatcgctggaccgtgaagaacagccc
acattttatcttgtactaacggccattgatggtgggattccccagagaactggtactgct
caaattatcatcactgttgtggatgcgaatgataatgctcctgtatttgaccatgaatta
tacagagctaacatacgagaaaacactcccaagggtacgttagtgacgaaggtgagtgct
gctgatttagacgaaggtacaaatggtgatttcgtgtattctttcaccagccacacgtca
ccatcgactcgagaattgttcaacttagatcctgtaactggagagatcagagttgaagaa
gtattagattttgaaaaggcacatatttatgaacttggtgtagaagctacggataaaggc
ccatacgcactagtagggcataccaaggttatggttcgattaattgatatgaatgataat
gcacccgagatagaggtagtgtcctcatccaatacggttcctgaagatgcgcaaattgga
acaatgttagccgaaatcagcgtaagtgatcctgattctggcgaaaacgggcaagtgcag
tgcggtgttgataaaaacctaccatttaaacttcaaaagatttcaagcaacaattataat
ttggtgacgagtgatgctttggatcgagaaacggtctcagtttataacatttcaatttcc
tcgtgggaccgaggttctcctcccctttcagcaagtaagcatatactaatcaccgtttcc
gacgtaaatgataatgcaccgaggtttacccaatccacatacaacgtgttcataatggag
aataacagacctggtgcttccatatttgctgttactgcattagatgcagatttggatctg
aatggcatgttaacgtattcgatggtggatagcaggatacaagatgtttcagcaacgcat
attgttacaattaactctaagagtggaaatgttttcgcagtgcgtccttttgactacgaa
aacctaaagcaattcaggatcaaagttaaagctgaagatgctggattccccaagctgagc
agcacaggcattgtaaatgttattattttagatcaaaatgacaatgcaccagtgattgat
tcacctttaatgtggaacaatacagcttcattggagattgctcgtcaatcgttatatcca
ggatacttggtcactaagataatcgcaagtgacgcggattcagggcagaacatgcgcctt
tccttccaaattttggaggccaccgacaaaagcctattcaatattgggccacactctggg
gaaattaagactgtgagaaatttgaagattgaagacgccaccaatcaaaggatggtaatt
cacgtcatggacaacggacagccgcgcctctccagcacaatcaccatcattgtatcagtt
ttggcgaatattactgaaaaaatgtcctcagaattgcaccaacataggaatgttagtcaa
ttttccgggccgaatgtttatttaatcataatttttggatcaacttccgttatcttcctg
gcaatcataattttgctgcttctactaaaatgcaagcaaaacaggactaacaacgtggat
gagaccagatgctgctttccctgcagcaagtggcactcgactgatgcctttaatcggaga
gcggttcttcatgaagggttgcgttatagtggagctgctccaactcttcccttatctgga
acttgtcactacgcagttggactgtcttctgaatcttctaaatgtgatttcttattccta
aaacctaccttgaattccaattacatgaatactcgtagtaccatcggaagagaatga
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