Leucoraja erinaceus (little skate): 129701523
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Entry
129701523 CDS
T09122
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-10-like
KO
K16499
protocadherin delta 2
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
leri04515
]
129701523
Cell adhesion molecules [BR:
leri04515
]
Cadherins
Protocadherins
129701523
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Fibulin_C
Motif
Other DBs
NCBI-GeneID:
129701523
NCBI-ProteinID:
XP_055498747
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All DBs
Position
11:complement(21778472..21781582)
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AA seq
793 aa
AA seq
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MANVLNCVSSFAFLVCMSGIVSAQLHYSIPEEMELRAFVGNIAQDLRLNEWELPARSPIL
VSDERKQFLEVNVDDGHLFVSERIDREQLCKQRLTCSLSLQIALHNPKEIYSIAVAILDI
NDNSPSFHESEYYFNISEQITPGAEFPFESASDPDVGTNTINTYQISPNDHFGIKVQTRR
GGSKTAELLLEKTLDREQQATFQLTLTAIDGGNPRRSGTARVIITVEDGNDNAPQFEHET
YSATLSENAPKGTLATKITAADLDEGSNAALTYSFTNHVPQSIRELFKLDPQTGQITVEG
TLNFEESHFYELDVKAIDNGSPRLTGKAKVIIAITDVNDNAPEIQVISSSSTVPENAQPG
TVVASISVTDLDSEKNGHVYCQIPKEFPFKLEQYSINNYNLITSDVLDREITTVYNISIS
AWDGGSPSLSSQENVLISVSDINDNSPRFTQTKYNVYLMENNTPGSSIFAVSAIDSDIGP
NGDVIYSILDEGFESRFVTMNSKNGDVYALISFDYEELKHFQFKVQARDSGTPSLSGTVT
VNVIILDQNDNAPSIVSPLIWNGSASLDIVPQSVHSGYLVTKVIATDADSGQNARLSYLQ
LEPTDNSLFTLDVLSGEIRATRSLEDQDLITKIFVLCVKDNGQPSLSSTATVIFIFLPNS
TVLSSEISIEPNEKKQRLNLNLYLVVALGSTSFLFLITIICLLVVKFKQDRNIEERYSTS
VCCSDRNNSDMIFHQRQVANEDADYIGSGQTEGYRYTVCLSPESSKSDFLFLKPCHPTLP
FNEASVRENSARK
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatgtattgaactgcgtgtcgtcttttgctttccttgtctgcatgtcgggcata
gtctcggcgcagcttcattactcgattcccgaggaaatggagcttagagcctttgttggg
aatatcgctcaggatttaagattaaacgaatgggagttaccggctcgcagccctatcctg
gtctccgatgaaaggaagcagttcctcgaggtaaatgtggatgatggtcatttatttgtg
agcgaaagaatcgacagagagcagctgtgcaagcaaaggcttacgtgctccctgtcttta
caaattgcgctccataatcccaaggaaatatatagtatcgcggttgcaatcctcgatata
aacgataattcacccagttttcatgagagtgaatattattttaatataagtgaacagatt
acgccgggggcggagtttccgttcgagagcgcgagtgatcccgatgtcggtacaaataca
attaacacttaccagatcagtccgaacgaccacttcggtattaaagtgcagacaagacgg
ggcggcagtaagactgcagagctgctgttggagaaaaccttggaccgtgagcagcaggcg
acgtttcagctcacactcaccgccattgatggtgggaatccgcgcagatcaggcacagcc
cgcgttatcattacagtagaggatgggaatgacaacgcccctcaatttgaacatgaaaca
tacagcgcaacgttatcagagaacgccccgaaaggaacgctggcgacaaaaatcaccgca
gccgatttggatgaaggcagcaatgcagcactcacatacagtttcacaaatcacgttcct
caatcgatccgtgagctcttcaaactggatccgcaaacaggacagatcactgttgaagga
acgctaaattttgaggaatcgcacttttatgaacttgatgtaaaagcaatagacaatggt
tcaccccgattgacgggcaaagcaaaggttattatcgccataactgatgtaaatgacaat
gctcccgagatacaggtcatctcgtcttccagtacggttcctgaaaacgcacaacctgga
accgtcgttgcatcaatcagtgtaactgatctagattccgagaaaaatggtcatgtctat
tgtcaaattccaaaagagtttccgtttaaacttgaacaatattctatcaataattacaat
ttgattaccagtgatgttttggatcgtgaaataaccacagtgtataacatctctatatca
gcatgggatggtggttcaccgtctctttcatcgcaggaaaatgtcttgatttcagtttct
gacataaatgataactcacctcgattcacacaaacaaagtataatgtttatttaatggaa
aacaatacaccgggatcttccatatttgctgtttccgcaatcgattctgatattggtcca
aacggtgacgtaatttacagcattctagatgagggcttcgagtcgcgatttgtcacaatg
aactctaagaatggcgacgtatacgcactgatttcctttgactatgaagaattgaagcat
ttccaattcaaagtgcaagctcgagattctggaactccatcactgagcggcactgttacc
gtaaatgttataattttggaccaaaatgacaatgcccccagtattgtttcgcctttgata
tggaatggttcagcatcgctggacattgtgccccagtctgtacactcgggctacttggtc
accaaggtaattgcaactgatgcagattctggtcaaaacgcaaggctttcctatttacaa
ttggaacccacagacaacagtttgttcactttggatgttctatctggtgaaatccgagca
actagaagtttagaagaccaagacctgatcacaaaaatatttgtcctctgtgtaaaggat
aatggacaacccagcctttccagtacagccacagtcattttcatattcttgcctaacagt
acagtgctatcgtctgaaatctccatcgagcccaatgagaagaaacaacgtttgaatctc
aatctgtatttagtcgtcgctttaggatcaacgtcttttctgtttctgataactattatt
tgtttgctggtggtgaagtttaaacaagacagaaatattgaagaaaggtacagcactagc
gtttgctgctcggaccgtaataattcggatatgatctttcatcagcgtcaagttgcaaac
gaggatgcggattatattggttctggtcagaccgaaggttaccgttatactgtgtgtttg
tcacctgaatcttcgaaaagtgatttcctctttctgaaaccatgccatccaacattgcct
ttcaatgaggcgagtgtcagggaaaacagcgcaagaaaatga
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