Leucoraja erinaceus (little skate): 129701525
Help
Entry
129701525 CDS
T09122
Name
(RefSeq) protocadherin gamma-C5-like
KO
K16499
protocadherin delta 2
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
leri04515
]
129701525
Cell adhesion molecules [BR:
leri04515
]
Cadherins
Protocadherins
129701525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
DUF6535
Motif
Other DBs
NCBI-GeneID:
129701525
NCBI-ProteinID:
XP_055498749
LinkDB
All DBs
Position
11:complement(21835412..21841799)
Genome browser
AA seq
795 aa
AA seq
DB search
MMANSALDNAIAFNRFALIILVCTTGLIFGQIRYSIPEEMKIGSFVGNIAEDLRLNVPQM
STRKLRLTSDDGGQYMEVNLENGILSVRERIDRERLCGQTAVCILPFEIILENPLVVFRG
VVEIIDINDNSPTFRDTSFVLQMSEAIAPGVRFPLESAEDPDIGMNTIAAYTISFNEYFT
LKAQRTPSGVINVELQLEKALDRELQAAFQWVLTANDGGTPARSGTTQIRITVVDFNDNP
PVFHREIYKASLREDAPQGTLVLQVKASDLDEGLNAELTYNFSSLVPPKVLKLFSLDPHT
GAIRVEGGVDYEEANIYSLTVQSVDHGSPSMTGRTTVLIELIDVNDNAPEIKVTSAPSNV
PENAHPGTLVTLINVIDRDSGENGQFQCDIPKYCPFRLRTSTKNHYELITSEPLDREAVA
EYNIQFVARDFGSPSLSTNKTIQIAISDVNDNAPRFGELSYNLYVMENNDPGTSIFAVTA
TDPDRNQNSYVSYSFLEGLIQNIPVSSYLSINSMNGTIYALRSFDYEKLKNFQIHVLARD
AGVPSLSSSATVNVIILDQNDNAPLIVSPSELSGSAAVETVPRSAGQGYLVTKIIATDAD
SGQNARLFYQMVKSTDPTLFNVGQNTGEIRTARIIFQTDTIAQTILFLVRDNGLPSLSST
ATVHITVLENITENLSESDNLLSSSNHFTDLNLYLIIVFTCTSALFLAIIILLIAIKCKQ
TMSASQEYNSRRFCYNSGDPRDTFTRRSAMEETLRYPGTGRLVRVPEANHYSVCLSPESA
KSDFLFLKPCSAPTS
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgaattcagcgctcgacaacgccattgcattcaataggttcgctttgataatt
ctggtttgtacaaccggattgattttcggacaaattcggtattctatccccgaagaaatg
aagatagggtcttttgttggaaatatcgctgaagatttgagactaaatgtaccgcaaatg
tcgactcggaaattgcgactaacatccgatgatggcggacagtacatggaggttaattta
gagaatgggattttgtctgttcgtgaaagaatcgacagggagcggctttgtggacaaaca
gctgtgtgcattctaccttttgaaataatactggagaaccctttggtggtgtttcgcggg
gtagtggaaattattgatataaatgacaattccccaacgttccgagacactagctttgtc
ttacaaatgtccgaagcgattgcacccggtgtacgttttcccctcgagagcgcggaagat
cccgatattggtatgaatactatcgctgcttacacaatcagttttaatgaatattttact
cttaaagcgcagagaactccgtccggcgttataaatgttgagttacagttagaaaaagca
ctggacagagaactgcaggcagcctttcagtgggtcctgacggcgaatgatggtgggaca
cctgcaagatctggcacaacgcagattcgtattaccgtggtggactttaacgataatcca
ccagtttttcatcgcgaaatttacaaggccagtttaagagaagacgcaccccaaggtaca
ttggtactgcaagtcaaagcaagtgatttggacgaaggtctgaatgctgagctaacctat
aatttcagcagcttagttccaccaaaagttctcaaattgttcagtttggacccccacacc
ggggccattcgcgttgaaggcggggtagattacgaagaagcaaacatttattcgctgact
gtccaatcagtggaccacggatcaccttcaatgacgggtcgcaccacagtactgattgag
ttaattgatgtaaacgacaatgcacccgaaataaaagtgacatctgctccgagcaatgtt
ccagaaaatgctcatccaggaactttggtaactttgatcaatgtcattgatcgagattct
ggagaaaatggacagtttcaatgtgacattcctaagtactgtcccttcagacttcgaaca
tcaactaaaaatcattatgagttgattaccagtgagccgctggaccgtgaagccgttgct
gagtataatatacaatttgtagctcgggactttgggtcgccttcactgtcaacaaataaa
accatccagattgcaatatctgatgtaaacgataacgccccgcggtttggtgaattgtca
tacaacttgtatgttatggagaataacgatccaggtacgtctatttttgcagtaactgca
acagatcctgatcggaaccagaattcctatgtttcttactcttttctcgaggggcttatc
cagaatattccagtgtccagttacctcagcattaactcgatgaacggcacgatttacgcg
ctgcgttcctttgactatgagaaactcaagaacttccagatccatgtactcgcccgtgac
gctggtgtaccttcgctaagcagcagcgccacggtgaatgtgatcatcttggatcaaaat
gacaacgcgccgctaattgtctcaccttccgaactgagtggatcagcagcagtggagact
gtgccccggtcagctggccaagggtacttggtcaccaagataatagcaactgatgcagat
tccggtcagaacgcacggctcttttatcagatggtgaaatctactgatccaacactgttc
aacgttggacaaaataccggtgaaatcagaacggcgcgcattatttttcagaccgatact
attgcacaaactattttattcttggttagagataatgggctgccaagcctatccagtacg
gctacagtgcacattacagtcttggagaacatcacggaaaacctttctgaaagtgataac
ttgttgagcagttcaaatcatttcaccgacttgaatctttatttaataatcgttttcact
tgcacttccgctctttttcttgcgattatcattctgttaattgccattaaatgtaaacag
accatgagtgcttcccaggaatataattcaaggcgtttttgttacaatagtggggatcct
cgtgatacttttactcgaagatctgcaatggaggaaactttacggtatcccgggactggc
cggttagtccgcgtgccggaagcgaaccactactcggtttgcctgtctcctgaatcagcg
aaaagcgattttctctttttgaagccatgcagcgctcccacgtcttag
DBGET
integrated database retrieval system
