Leucoraja erinaceus (little skate): 129701527
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Entry
129701527 CDS
T09122
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin alpha-C2-like
KO
K16499
protocadherin delta 2
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
leri04515
]
129701527
Cell adhesion molecules [BR:
leri04515
]
Cadherins
Protocadherins
129701527
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
DUF4625
Motif
Other DBs
NCBI-GeneID:
129701527
NCBI-ProteinID:
XP_055498751
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Position
11:complement(21897652..21901932)
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AA seq
795 aa
AA seq
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MAYVPRFALIAFACIFAICAPGPISGQIRYSIPEEMEQGAFVGNIAVDLGLNVRQLSARK
FRLSSDDGGRYMKVSLDNGIMSIREKIDRDRICGQNDKCTVHFETILENPLEVYHGELEI
LDVNDNSPTFPQSSIVLQISEASAPGVRFRLEGADDPDIGTNTVAAYTISSSEHFILKTQ
RAEDGIMIAELLLGKSLDREQQSSFQLLFTATDGGTPQRSATAQIIITVLEINDNPPVFD
HDIYRGIVSENAPRGTLVLKVKANDLDEGLNSELTYCFSDISLIRARKLFSLDPVTGELR
VKGLLDFEQVNSYSLDIRAQDHGSPAMTGHSKVLIKVTDVNDNAPEIKVPSPCNKIPENA
PPGSFICLINVMDRDSGANGQVRCELRQKNVPFRLQKVSNNYKLTTSETLDREAIPEYNI
LISAWDLGSPSLSSNTTIQIAISDVNDNEPQFTESSYNIYIMENNAPGASISTVTATDPD
LDQNSYISFSFLDNHIHNVPVSTYLTINSINGTIYALRSFDYEELKNFQIHVQARDAGVP
PLSSSAMVNVVILDQNDNAPVIISPSELSGSAAVDTVPRSAGQGYLVSKIMATDADSGQN
AQLFYQIVKTTVPGLYNVGQHSGDVRTARNVFQSDTAVQTLIILVRDKGQPSLSSTITMN
IRVLENSTEGISESSTLVKNPEYFSDPNVYLIVIFSCTSVVFLLIIILLIGIKYKQGRNI
TQEYNSPSYCYNGGVSHGTFNGISAMEETLRYPGAGRVVRGPELNQCSVCLSPESAKSDF
LFLKLCGAPTSQDQC
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atggcgtacgtaccgaggtttgccctcatagcatttgcttgcatatttgcgatatgtgca
ccaggtcctatctccgggcaaattcgttattccattcccgaggaaatggagcaaggggca
tttgttgggaatatcgctgtggatttgggcctcaacgtacggcaattgtcagctcgcaaa
ttccgactgagctctgatgacggagggcggtacatgaaggtcagtttggacaatggaata
atgtctattcgtgaaaaaatcgaccgggatcgtatttgtggacagaatgataaatgtact
gtacatttcgaaacaatattggaaaaccccttggaggtgtatcacggggaattggagatt
cttgatgtaaatgacaattcccccactttcccgcagagcagcattgtcttgcagatatcg
gaagccagtgcgcccggtgtacgtttccgactcgagggggcggatgatcccgacattggt
acaaataccgtggccgcttacacaatcagctccagtgagcactttattctaaaaacacag
agagccgaagacggtattatgattgccgagttgctgttagggaaatctttggaccgagag
cagcaatcatcatttcaactcttgtttacggcgactgatggtggcacccctcagagatca
gccacagctcagattatcattactgtattggaaatcaacgataatccacctgtgttcgat
catgatatttacagaggcatcgtaagtgagaacgcgccgcggggtacgttggtgctgaaa
gtcaaagcaaatgatttggacgaaggactgaattcggagctgacgtattgttttagtgat
atttctttgataagagcgcgaaaattattcagtttagacccagttactggggagcttcga
gtcaaagggcttctagattttgaacaagtaaacagctattctctggatattcgagcccag
gaccacggttcccctgcaatgacaggacactccaaagtactgatcaaagtcactgatgtg
aacgacaacgcacctgagataaaggtaccatcaccttgcaacaaaatcccggaaaatgcg
ccaccaggaagtttcatatgtctgattaatgtgatggatcgtgattctggagcgaacggt
caagtacgttgcgagttaagacaaaagaacgtcccatttcgactgcaaaaggtatcgaac
aactataaattaaccacgagtgaaacgttggaccgtgaagccatccctgagtataacatt
cttatttcagcctgggacttggggtcgccgtcactctcatcaaatacaaccatccagatt
gcaatttcggacgttaacgataacgaaccacaattcacagagtcatcctacaacatatat
ataatggagaacaacgctccgggtgcgtccatttccacagtaactgcaacagatcctgat
ctggatcaaaattcctatatttccttctcctttctcgataaccatatacacaatgtgcca
gtatccacttacctcactatcaattcaattaacggtactatttacgcactgcgttccttt
gattatgaggaactaaaaaacttccagatccatgttcaagcccgtgacgccggggtgcct
ccgttgagtagcagcgccatggtgaacgtggtcatcctggatcaaaatgacaacgcgccg
gtaataatttcaccttcagaactaagtgggtcagcagcagtggataccgtaccccggtca
gcaggtcaagggtacttggtcagcaagataatggcaactgatgcagattctggtcagaac
gcgcagctcttttatcaaatagtgaaaactaccgtccccggtttgtacaacgttggacaa
cattccggagatgttagaacagcgcgcaatgttttccagtcagacactgctgtacaaact
ctaatcatcttggttagggacaaagggcagccaagcctgtccagcacaattacaatgaac
attagagttttggagaacagcactgaaggaatcagcgaaagcagcaccttggtgaagaat
ccagaatatttctctgatccaaacgtttatttaatcgtcattttcagttgcacttccgtg
gtctttcttctgatcatcattctgttgattggtatcaagtacaaacagggcagaaatatt
acccaagagtataactctcccagttattgttacaacggcggggtttcgcatggcacgttt
aatggaatatctgcgatggaggaaacattacgttatcctggggcaggccgagtagtgcga
ggaccagaactgaatcaatgctcggtctgcctgtctccagagtcagcgaaaagcgatttt
ctgttcctgaagctatgtggtgctcccacctctcaagaccaatgctaa
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