Leucoraja erinacea (little skate): 129701530
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Entry
129701530 CDS
T09122
Name
(RefSeq) protocadherin gamma-C5-like
KO
K16499
protocadherin delta 2
Organism
leri
Leucoraja erinacea (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
leri04515
]
129701530
Cell adhesion molecules [BR:
leri04515
]
Cadherins
Protocadherins
129701530
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_3
DNER_C
Motif
Other DBs
NCBI-GeneID:
129701530
NCBI-ProteinID:
XP_055498753
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Position
11:complement(21924354..21927078)
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AA seq
830 aa
AA seq
DB search
MNSGLEIYKIFYLVRGPFARITRGEAWSGTLTGRGTMACLPRFAFTAFACIFVICRPGLI
TGQIRYSIPEEMKQGAFVANIAVDLGLNVRQLSARKFRLGSDDGGRYMKVSLDNGIMSIR
ERIDRERICGQTDKCTIPFETILANPLEMYHGELVILDVNDNSPTFPQSSIVLQISEASA
PGVHFRLEGADDPDIGTNTVAAYTISSSEYFSLKTQRAEDGIIIAELLLEKLLDREQQSS
LQLLLTGMDGGTPQRSATAQILITVLDFNDNPPVFDHNIYRGSVSENALRGTLVLKIQAN
DLDEGLNAELTYRLHDATLRRVQHLFSLDPRTGEILVKGPLDFEEVNSYSLDIQAQDHGS
PAMTGHCKVVIKVIDANDNAPEIRVTSASNKIQEDTPPGSFISLIYVIDRDSETNGQVRC
EIQKNVPFRLQKTSNHYKLVTSETLDREAISEYNILVSAWDLGSPSLSTNKTIEISISDI
NDNAPQFSETSHNVYVMENNAAGASVSTVTAMDPDLDLNSHVSYSFLDNHIQNLPVSTYL
TINTINGTIYALRPFDYEELKNFQIHVQARDAGVPRLSSSATMNVIILDQNDNAPVIVSP
SEQSGPATVEVVPETAGQGYLVTKIIANDADSGQNARLFYQMMKSTATGLYNIGQHSGEV
RTARNILQSDNALQTLVILVKDNGQPSLSSTVGINIRLLWNSTEGISESSTLVKNPEYFS
DPNVYLIVIFSCTSVVFLLIIILLIGIKCKQDRHSIQEYNSPSYSHNYGGSHGTFSGRPA
LEETLRYPGTGRVLRVQEPNQYSVCLSPESAKTDFLFLKPCGAPTSQAQC
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgaattcgggattggaaatctataagattttttatctggtgcgtggaccgtttgcacgg
attacccgaggagaggcctggtctgggactttgacagggcgcggaacaatggcgtgccta
ccgaggtttgccttcactgcgtttgcttgcatatttgtgatatgtcgaccgggtctaatc
accgggcaaattcgttattctattcccgaggaaatgaagcaaggggcatttgttgcgaat
atcgctgtggatttgggcctgaacgtacggcaattgtcagctcgcaaattccgattgggc
tctgatgacggagggcggtacatgaaggtcagtttggacaatggaatcatgtctattcgt
gaaagaatcgaccgggaacgtatttgtggacagactgataaatgcactatacctttcgaa
accatactggcgaaccctttggagatgtatcacggggaattggtgattcttgacgtaaat
gacaattctcccactttcccgcagagcagcattgtcttgcagatatcggaagccagtgca
cccggtgtacatttccgactcgagggcgcggatgatcccgacattggtacaaataccgtg
gccgcttacacaatcagttccagtgagtactttagtctaaaaacacagagagccgaagac
ggtattataatagccgagttgctgttagagaagttgttggaccgagagcagcaatcatcc
cttcaactcttgcttacggggatggatggcggaacccctcagagatcagccacagctcag
attctcattactgtgctggacttcaacgataatccacctgtgttcgatcataatatttac
agaggcagcgtaagtgagaacgcactgcggggtacgttggtgctgaaaatccaagcaaat
gatttggacgaaggactgaatgcggagttaacatatcgtttacatgatgctactttgcga
agagtgcaacatttattcagtttggatccacgcaccggggagattctagttaaagggcct
ctagattttgaagaagtaaacagctattctctcgatattcaagcccaggaccacggttca
cctgcaatgacggggcactgcaaagttgtgatcaaagtgattgacgcgaatgacaatgca
cctgagataagggtgacatcagcttccaacaaaatccaggaggatactccaccaggaagt
ttcatatccctgatttatgtgatcgatcgcgattccgaaacgaacggtcaagtgcgttgc
gagatacaaaagaacgtcccatttcgactgcaaaagacatcgaaccactataaattagtc
accagtgaaacgttggaccgtgaagcgatctctgagtataacattcttgtttcagcctgg
gacttgggttcaccgtcactatcaacaaataaaaccatcgagatttcaatttcggacatt
aatgataacgcaccacagttcagtgagacatcccacaacgtatatgtaatggagaataac
gcggcgggtgcgtccgtttccacagtaactgcaatggatcctgatctggatctaaattcc
catgtttcctactcctttctcgataatcatatccaaaacttgccagtgtccacttacctc
actattaacacaattaacggtactatttacgcgctgcgtccctttgactatgaggaactc
aagaacttccaaatccatgttcaagcccgtgacgccggggtgcctcggttgagcagcagc
gccacgatgaatgtgatcatcctggatcaaaatgacaacgcgccggtaattgtttcacct
tcagaacaaagtggcccagcaacagtggaggtcgtgcccgagacagcgggtcaagggtac
ttggtcaccaagataatagcaaacgatgccgattctggtcagaacgcacggctcttttat
cagatgatgaaatctaccgcaaccgggttgtataacattggacaacattccggggaagtc
agaacagcgcgcaatattttgcagtcagataatgctttacaaactctagtcatcttggtt
aaggacaatgggcagccaagcctgtccagcacagttggaatcaacattagattgttgtgg
aacagcactgaaggaatcagcgaaagcagtaccttggtgaagaatccagaatatttctct
gatccaaacgtttatttaatcgtcatattcagttgcacttccgtggtctttcttttgatc
attattctattgattggtatcaagtgtaaacaggatagacatagtatccaagagtataac
tcgcctagttattctcacaattatgggggttctcacggtacgtttagtggaagacctgcc
ctggaggaaactttacgctatcctgggacgggccgggtactccgcgtgcaagaaccgaat
caatactcggtttgtctttctccagagtcagcgaaaaccgattttctcttcttgaagcca
tgcggcgcacccacctctcaagcccaatgctaa
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