Leucoraja erinaceus (little skate): 129701536
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Entry
129701536 CDS
T09122
Name
(RefSeq) protocadherin gamma-C5-like
KO
K16499
protocadherin delta 2
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
leri04515
]
129701536
Cell adhesion molecules [BR:
leri04515
]
Cadherins
Protocadherins
129701536
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
DNER_C
Motif
Other DBs
NCBI-GeneID:
129701536
NCBI-ProteinID:
XP_055498759
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Position
11:complement(22003620..22006655)
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AA seq
792 aa
AA seq
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MAYKNQKTRFACNVFACMLLVCAPDLITGQLRYSIHEEMEEGAIVGNIALDLGLNVRQLS
ARKLRLSSDDGGRYMKVGSDNGVLSIRERIDRERICRHADVCTIYFKTTLENPLEVYRGE
VEILDVNDNPPNFGDGSIALQISEAIAPGVRFRLESAEDPDIGINTVTAYTISSNEHFSL
KTHTTEDGIMVAELLLEKYLDREVQSSYQLLLTAVDGGIPQRSGTAQVLITVLDINDNPP
VFDHDIYRSSLSENARQGAIVMKVNANDADEGMNAELTYTFSDVALRRARNLFSLDPDSG
EIRVEGPLDFEEATSYSLDIQAVDHGSPAITGHANVLIKVIDVNDNAPEIKVTSASNKIP
ENAPPGTFITFIDIIDRDSGENGQFRCEIPKNVPFRIETPSKLVTSETLDREEISEYILV
ITAWDLGSPSLTSNKTIRIAITDVNDNAPRFAASSYNVYVMENNAPGASIFALTALDDDQ
EQNAYISYSFVNNHIQNLPVSTYLTINPINGTIYALRSFDYENFKNFQIKVQARDAGVPP
LSSRATVNVIILDQNDNAPVIVSPSEESGSAAAEVVPQSARQGYLVTTIMATDADSGQNS
RLFYQMTKSTDATLFNVGQNSGEIRTERNILQSDNPLQTLVILVKDNGQPSLSSTVTMNI
RVLENSTEGITESSTLMKNPEYFADPNVYLIIIFSCTSLVFLLIIVLLIGIKCKQDRSII
QGYNTPNYCYNRGDLHGTLNGRPIMEETLRYPGTGRVVRVPEPHQYSVCLSPESAKSDFL
FLKPCGAPTSQA
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atggcgtacaaaaaccaaaaaacgaggtttgcctgcaatgtgtttgcgtgtatgttactg
gtatgtgcaccggatctaattactgggcaacttcgctattctattcacgaagaaatggaa
gaaggcgctattgttggaaatatcgctctagatctgggtctgaacgtacggcaattgtcg
gctcgcaaattgcgactcagctctgatgatggaggacggtacatgaaggttggttcagac
aatggggtattatctattcgtgaaagaatcgaccgggaacgtatttgtaggcatgcagac
gtgtgtaccatatattttaaaacaacactagaaaatcctttggaggtgtaccgcggggaa
gtagagattctcgatgtcaatgataatcctccgaatttcggagacggaagcatcgcctta
cagatatctgaagcgattgcacccggagtacgtttccgtcttgagagcgcggaagatccc
gatattggaataaataccgtcaccgcctacacaatcagttccaatgagcactttagtcta
aaaacgcatacaacagaagatggtattatggtagccgagttactgttagagaaatattta
gaccgagaagtccaatcatcatatcaactcttacttacagcggttgacggtgggatacct
cagagatcaggcacagctcaggttctcattactgtattggacattaatgataatccacca
gtgttcgatcatgatatttacaggagcagcttaagtgagaacgctcggcaaggtgccatt
gtgatgaaagtcaatgcaaatgacgcggacgaaggaatgaatgcggagctaacgtacact
tttagtgatgttgctttgcgaagagcgcgtaatttgttcagtttagacccagatagtggg
gagatccgtgtagaaggaccgctggattttgaagaagcaactagctattctctagatatt
caagctgtagaccacggttcacctgcaattactggacacgcaaatgtgctgatcaaagta
attgacgtgaacgacaacgcacccgagattaaggtgacatcagcttccaacaaaattccg
gaaaatgctccaccaggaacattcataacgttcattgatattattgaccgcgattctggc
gagaacggccaattccgctgcgagataccgaagaacgtcccctttagaatagaaacacca
tcgaaattggttaccagtgaaacgttggaccgtgaggagatttctgaatatatattagta
attacggcatgggacttggggtcgccctcactgacatctaataaaaccatccgaattgct
atcaccgatgtaaacgacaacgccccgcggtttgctgcatcctcctacaatgtctatgtg
atggagaataacgctccaggtgcatccattttcgcattaactgcactagatgatgatcag
gagcagaatgcctatatttcttactcttttgtgaacaatcacatccaaaacctgccggta
tccacttacctgaccattaacccaataaacggaacgatttacgcgctgcgttcctttgat
tatgagaatttcaaaaacttccaaatcaaagtacaagcccgtgacgccggggtgcctcca
ttaagcagccgcgccacggtgaatgtgataatcctggatcaaaatgacaatgcgccggtt
attgtttcaccttcagaagagagtggatcagcagcagcggaggtcgtgccccagtcagcg
cgtcaaggatacttggttaccacaataatggcaaccgatgcagattctggtcagaactcg
cggctcttttaccagatgacgaaatctaccgatgccactttgttcaacgttgggcaaaat
tccggagaaatcagaacagagcggaatattttgcagtccgataatcctttacaaactctg
gtcatcttggtgaaggacaatgggcagccaagcctgtccagtactgttacaatgaacatt
cgagttttggagaacagtactgaaggaatcaccgaaagcagcaccttgatgaaaaatcca
gaatatttcgctgatccaaatgtttatttaatcatcattttcagttgcacttcccttgtc
tttcttctgatcatagttctgttgattggcatcaagtgtaaacaggacagaagtattatc
caagggtacaacacccccaattattgttacaatcgtggagacttgcacggcacgcttaat
ggaagacctatcatggaggaaactttacgctatcccgggacgggccgggtggtccgcgtg
ccggaaccgcatcaatattcggtctgcctgtctccagagtcagcgaaaagtgatttcctc
ttcttgaagccatgcggcgctcccacgtctcaggcctaa
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