Leucoraja erinacea (little skate): 129701537
Help
Entry
129701537 CDS
T09122
Name
(RefSeq) protocadherin gamma-C5-like
KO
K16499
protocadherin delta 2
Organism
leri
Leucoraja erinacea (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
leri04515
]
129701537
Cell adhesion molecules [BR:
leri04515
]
Cadherins
Protocadherins
129701537
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_3
Cadherin_4
DNER_C
Motif
Other DBs
NCBI-GeneID:
129701537
NCBI-ProteinID:
XP_055498760
LinkDB
All DBs
Position
11:complement(22006904..22011862)
Genome browser
AA seq
792 aa
AA seq
DB search
MAYLLRFACNVFTCMLLVCAPHLITGQLRYSIPEEMEEGAFVGNLAQDLGLNVRQLSARK
LRLGSDDGGRYMKVGLDNGVLSIRERIDREGICRHTEMCTIYFKTTLENPSEVYRGEVEI
LDVNDNPPNFDDGSIALQISEAIAPGVRFRLESADDPDIGINTVTAYTISSNEHFSIKTH
TKEDGIMVAELLLEKYLDREVQSSYQLLLTATDGGIPQRSGTAQVLITVLDNNDNPPVFD
RDNYRGSLSENARQGAIVMKVNANDADEGLNAELTYTFSDVTLRRVGNLFRLDPHNGEIR
VEGPLDFEEATSYSLDIQAMDNGSPPITGHANVLIKITDVNDNAPEIKLTSASTKIPENA
PPGTFIMFIDVIDRDSGVNGQVRCELPQNVPFRLQTASSHYKLVTSETLDREVISEYTLP
ISAWDLGSPSLSSNKTIHIAITDINDNAPRFSESSYNVYVTENSAPGASIFALIALDADQ
EQNSYISYSFGDNRIQTLPVSTYLSINPMNGTIYALRSFDYEELKNFQINVQARDGGVPP
LSSSATVNVIILDQNDNAPVIVSPLEQSGSVATEIVPQSAGQGYLVTKIIATDADSGQNS
RLFHQMVKSTDPTLFNVGKISGEIRTSRNILQSDIGLQTLVILVKDNGQPSLSSTVTMNI
RVLENITEGITESSTFVKNPEYFSDPNVYFIIIFSCTSVVFLLIIVLLIGIKCKQDRSII
QGYNTPSYCYNRGELHGTFNGRPAIEETLRYPGTGRVVRVPEPHQYSVCLSPESAKSDFL
FLKPCGAPTSQA
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atggcgtacctactgaggtttgcctgcaatgtgtttacgtgtatgttactggtatgtgca
ccgcatctaatcaccgggcaacttcgttattctattccggaggaaatggaagaaggcgct
tttgttggaaatctcgcacaagatctgggtctgaacgtgcggcaattatcagctcgcaaa
ttgcgactcggctctgatgacggtggacggtacatgaaggttggtttagacaatggggta
ttatctattcgtgaaagaatcgacagggaaggtatttgtaggcacaccgaaatgtgtact
atatattttaaaacaacactagaaaatccctcggaggtgtaccgcggggaagtagagatt
ctcgatgtaaatgacaatcctcccaatttcgatgacggaagcatcgccttgcagatatct
gaagcgattgcacccggagtacgtttccgccttgagagcgcggacgatcccgatattgga
ataaatactgtcaccgcctacacaatcagttccaatgagcactttagtataaaaacgcat
acaaaagaagatggtattatggtagctgagttactgttagagaaatatttagaccgagaa
gtccaatcatcatatcaactcttgcttacggcgactgacggtgggatacctcagagatca
ggcacagctcaagttctcattactgtattggacaataatgataatccaccagtgttcgat
cgagataattacaggggcagcttaagtgagaacgctcggcaaggtgccattgtgatgaaa
gtcaatgcaaatgacgcggacgaaggtctgaacgcggagctgacgtacacttttagtgat
gttactttgcgaagagtgggtaatttattcagattagacccacataatggagagatccgt
gtagaaggaccgctggattttgaagaagcaactagctattctctcgatattcaagctatg
gataatggttcacctccaattactgggcacgcaaatgtgctgatcaaaataactgacgtg
aatgataacgcacccgagataaagctgacatcagcctccaccaaaatcccggaaaatgct
ccaccaggaacattcattatgttcattgatgttattgatcgtgattctggagtgaatggt
caagtccgctgcgagttgcctcagaatgttccttttagactacaaacagcatcgagccat
tataaattggttaccagtgaaacgttggaccgtgaagtaatttctgagtacacattacca
atttcagcatgggacttgggatcgccttcactgtcgtcaaataaaactatacatattgca
ataaccgatataaacgataacgccccgcggttttctgaatcatcctacaacgtatatgtg
acggagaatagtgctccgggtgcatccatttttgcactaattgcactagatgctgatcag
gagcagaattcctatatctcttactcttttggggacaatcggatccaaaccctgccagta
tccacttacctgtctattaacccaatgaacggtactatttacgcgctgcgttctttcgac
tatgaggaactcaagaacttccagatcaatgtacaagcccgtgatggtggggtgcctccg
ttaagcagcagcgccacggtgaatgtcatcatcctggatcaaaatgacaacgcgccggta
attgtttcgcctttagaacagagtggatcagtggcaacggagatcgtgccccaatcagcg
ggtcaaggttatttggtcaccaaaataatagctacagatgcagattctggtcagaactca
cgactctttcatcagatggtgaaatctaccgatcccactttgttcaacgttgggaagatt
tccggtgaaatcagaactagtcgcaacattttgcagtccgatattggtttacagactctg
gtcatcttggtcaaggacaatgggcagccaagcctgtccagtacagttacaatgaacatt
cgagttttggagaacatcactgaaggaatcaccgaaagcagcacctttgtgaagaatcca
gaatatttctctgatccaaatgtttactttatcataattttcagttgcacttccgttgtg
tttcttctgattatcgttctgttgattggcatcaagtgcaaacaggacagaagtattatc
caagggtataacacccccagttattgttacaatcgtggagagttgcacggcacgtttaat
ggaagacctgctatagaggaaactttacgctatcccgggacaggccgggttgtccgcgta
ccggagccgcaccaatactcggtctgcctgtctccagagtcagcgaaaagtgatttcctc
ttcttgaagccatgcggcgctcccacgtctcaggcctaa
DBGET
integrated database retrieval system
