Leucoraja erinaceus (little skate): 129701539
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Entry
129701539 CDS
T09122
Name
(RefSeq) protocadherin-10-like
KO
K16499
protocadherin delta 2
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
leri04515
]
129701539
Cell adhesion molecules [BR:
leri04515
]
Cadherins
Protocadherins
129701539
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
129701539
NCBI-ProteinID:
XP_055498762
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Position
11:complement(22086022..22265467)
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AA seq
901 aa
AA seq
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MRGAMASSHSDTCPKWRLITFVIWTCLWEFISGQIRYSIPEELKHGAFVGNIADDLGLDV
RQLSARRFRIVPAANTQYLEVNLENGILFVNEKMDRELLCDLTSSCFLHLEIVVENPLEL
HRVEVEILDVNDNSPSFPWREFRLEIAESVALGSRFPLENAHDPDVGTNSLQTYRLSPNQ
YFQLEVQTRKGRNKFPVLVLDRSLDRENQAVHQMVLTAVDGGVPERSGTALVIVTVLDVN
DNAPVFDQAVYTVCLVENALRNTLVIKLNATDLDQGSYGEVTYSFSNHAPARLRQLFRVD
PQTGEIRVKGVVDYEEASVYEIYVQAKDKGLYTAAVHCTVVVEIIDVNDNAPELILTSVS
SPVREDAMLGTVIALISVTDRDSGDNGKTYCRIPSHLPFKLQSSFKNYYTLVTDDHLDRE
RVFEYNVSITVTDSGTPSLSTVKTILVKVSDVNDNAPRFAHPSYTVYLMENNAPGASICS
VSAWDPDSEQNAYVSYCILDSKIKGTPISSYVSINLNTGNLYALRSFDYEQLKNFRVQIQ
AQDAGFPSLHNNVTVTVIILDQNDNAPAIVYPLPPNGSVEWVPRSADAGHLVAKVTAVDD
DSGQNSRLSYQLAQATDPGLFSMAPFTGEIRTTRRLEDYDAPSQKLVVHVTDNGKPPLST
SLTISVSIVDSIPEVIADLTEGPQTIEYFSEFNLYLIVSLGSVSFVFLLAIIALISIKCH
KDRHGTLGDRCPLSTCCLRGSRRCCRFRRKHSRDVLNNSHTNFQMPPSVKAPPSSVDVAG
GSGGTLSQTYCYKVCLSPESAKSDLMFLKPYNSSTTGGTKAKPVSPHVSTARKEGSDGTN
IGSNGSSERMGVMSGLVEEIGSWSRNQLRPTAPSNEAQHMNMVSHHYLWETEDQISKYGP
P
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggagcgatggctagttctcactcagacacctgccccaagtggcgtctgataacc
tttgtcatctggacttgcctctgggagtttatcagcggtcagatccgctactctattccc
gaagagttgaaacacggggcgtttgttgggaatatcgccgatgatttgggacttgatgtc
aggcagctgtcggcgcggcggtttcgtatcgtccctgcggccaacactcagtacttggag
gtcaatctggagaacgggattttgttcgtgaacgaaaaaatggacagagagttgctgtgc
gatttgacttccagctgtttcctgcatctggagatcgtggtggaaaacccgctggagtta
caccgggtggaggtggagatattggatgtgaacgacaattcccccagtttcccctggagg
gaattccgcttggagatcgccgagtcggtggctctgggttcgcgtttcccgcttgagaac
gctcacgacccggacgttggcaccaactcgctgcagacctacaggctcagtcccaaccag
tacttccagctggaggtgcagactcgcaaggggcgcaataagttccccgtgttggtgctg
gacaggtcactagaccgggagaaccaggcggtgcaccagatggtgttgacggccgtggac
ggcggggtgccggagaggtcgggcaccgctctggtcattgtcaccgtcctggatgtcaac
gacaacgctcctgtcttcgaccaggctgtgtataccgtctgtctggtggaaaacgcgctg
agaaacaccttggtgatcaaactgaacgccaccgacttggaccaagggtcctacggagag
gtaacctactcctttagtaatcatgccccagcccgcttgcgccagctctttcgggtcgac
ccccaaacgggcgaaattcgagtcaagggtgtggtggattatgaagaggcgagtgtttac
gagatttatgtccaggcgaaagataagggtctttacacggcggccgtgcattgcacggtg
gtggtggaaattatcgatgtcaatgacaacgcgcccgagctgatcttgacctctgtgtcc
agtcccgtcagagaggacgcgatgctggggacggtgatcgctctgatcagtgtgaccgac
cgcgattcgggcgacaacgggaagacctactgccgcatcccgtctcatctccctttcaaa
ctccagtcgtctttcaagaactattacactctggttacggacgatcacttggatcgcgag
cgggtttttgagtacaatgtgagcattactgtcaccgactccggcaccccttccctctcc
accgtcaaaaccattctcgttaaggtctcggatgtcaatgacaacgcgccccgcttcgca
cacccgtcctacacggtgtatctaatggagaataacgcgcccggtgcgtctatctgttcg
gtgtcagcctgggatcccgattccgagcagaacgcctatgtgtcttactgcatcttggac
agtaagatcaaaggcacccctatatcatcctatgtctccatcaacttgaacacgggcaac
ctctatgcgctgcgctcttttgactatgagcaactcaagaatttccgagttcaaatccaa
gcgcaagacgcgggcttcccatcccttcacaacaacgtgacggtgaccgtgatcatcttg
gaccagaacgacaacgctcccgcgatcgtgtacccgcttcctcccaacggctcggtcgag
tgggtgccacgctccgccgatgccggtcacctcgtggccaaagtaacggcggtggacgat
gactcgggtcagaactcccggctgagttaccagctggcccaggcgactgacccgggactg
ttcagcatggcacccttcacgggagagatcaggacgacgcgccgccttgaagactatgat
gcccccagccagaagttggttgtccatgtcacagacaatgggaagccaccgctctccacc
tcgctcaccatcagcgtttcaatagtcgatagtattcccgaggtcatcgcagacttaaca
gaggggccccaaaccatcgaatacttctccgagttcaacctttacttaatcgtctcgctc
ggctccgtctccttcgtattcctcttggctatcatcgccctgatctccatcaagtgtcac
aaggataggcacggcacccttggcgaccgatgccctctcagtacctgttgcctccggggc
tcccgccgctgctgccgtttccgcaggaaacactccagggacgtgttgaataattcacac
acaaacttccagatgccacccagtgtgaaagccccgccgagttcagtggatgtagcgggc
ggcagcggtggcacgctctcccagacctactgctacaaagtgtgcctgagtcccgaatcg
gccaagagcgacttaatgttcctcaaaccttacaattcatccacgaccggggggaccaaa
gccaaacccgtcagcccccacgtgagtacagccagaaaagaggggtcagacgggactaat
attggaagcaacgggtccagcgagcgcatgggagtgatgtcaggactggtggaagaaatc
ggaagttggagcaggaaccagctgcgacccacagccccaagtaatgaagctcagcacatg
aatatggtttcacatcattatctctgggagaccgaagaccagatttccaagtatggacct
ccttga
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