Leucoraja erinaceus (little skate): 129701662
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Entry
129701662 CDS
T09122
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 2-like isoform X1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
leri04131
]
129701662
Membrane trafficking [BR:
leri04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
129701662
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_12
SH3_1
TPR_8
SH3_2
TPR_1
SH3_9
TPR_MalT
TPR_7
Motif
Other DBs
NCBI-GeneID:
129701662
NCBI-ProteinID:
XP_055498972
LinkDB
All DBs
Position
11:33450313..33559920
Genome browser
AA seq
1392 aa
AA seq
DB search
MQKIKSLTPHGLETAGTAIIKLCNLDVVDSAEEEKGTKGCNNSLELLPGTARYTDPLSDG
MLNDSTRLNSTKAEEESEYEVGSSRLVGHEENSIGPATAVNMEKESPFVSLNSSGYWSDM
QSQSLETDRESTHGDKMAVGKWEHQPESRSLNQDTDCEDHLLGSSVKQQFPKDVTLSYCV
ISQKSGLVDHELQGATRRRLCILESETKDVGALFNELSSRLISIHAEKDLFVLTFKTVEE
IWKFTTYLSLGFVGRCLENLLLDQHFWLNVSLVEDVKIQVKVNEVHLSLMYLDLLLQEGH
FFTRALSNIPKSEEQDMNICKDDLIMVKDVGNDSKWEATTLLTNEKGFIPVSAPQALLYP
FYQWFLKTRGGNFGDHEEYKQHHFPHSIGTGTCVATVDYKEGEVDELCFSEGETIQIIGF
LLSNLRWFLGKSLSTGLTGFVPVEHVQPDQFKTLESHLLFLSDEEKSSLNMFRKPDEEHC
INLLNKLSQTDVDTVYRLGELLPFTYDQHLLSNQDGLTPANNIPDVNPSKYKEIEQIVPE
KDQPNHPIFYICLSIEEMNDPEVFDPLLLFLNQKEYIPHFRHFYDLNFSFLGSILYGITE
EKEVLQYLEMAREMAKMHDKHWAYCRICFLLGRLCAKRLRFSQARIYFEEAMTLVQGTFS
DLYLLTALYVNLASVYLKLKMKVKSHTLVEKAATLLLCIPSHAFSSENELDILNILLKKA
MIVNDYHLEARSCFLIAKLFLESGKSEETLLFAEHLQFLSNSFSSQSNIVPIDVHLILSY
IYNKKCLPQLALAALRFSQPGSSSTLFGSLQKADFVIETIAKFNSQEMCMGEIPSQAAFY
LHEALDLSFRIGNIDILWDLNFALANLYQQHKLYERAINYMKKCAEVASCTSDGGAYKAY
LSLAWLYVLNNQPILATEILNSLLESSLETHNPIQQGIVHNMLALSLRKHTRLKEAMENC
YCAIVTAEESGIKCNQAIAHANFGSLTLCCKILALPGRYLRKSLNLYLQMQDCCLEVGYV
QVLLSLGQYYIDRGMRNDGRLHYELALLTAMKTNNVHYQIQAMEQLCRFCGKVLHDKMQC
ITYYEHWLVLTQRLKDKEQEMKMLTILSHLCFSCNTQSSYRLSLSYTKQNLKNFIDLGMH
SKEAEAWLMAGKTYYMMEKDELVELYLQAAVQTAERMENMHFTMTINEAAGDVFYNGPRE
REKAESFYRDGAVPLARVKKDLDVELRLFNKLTELNISLNHLDQALDYAKTAVRLSINTG
DQLKERVAFYRLATVYYLFQQYEMAENYYLKALSLSSHILLFAKEAKYYVKIYFRLGDIT
LHKFKDPYDAAGYFQMAFAAAIELGSKEDLFNICTKLANIYKNYIVNEDLCSQFVEKAKL
LSTKLHKNKQNT
NT seq
4179 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaataaaaagcctgacacctcatggacttgaaactgctggtactgcaattata
aaactgtgcaatttagatgttgtggattcagctgaagaggaaaagggaacaaagggctgc
aacaatagtttggaactgctaccaggaactgcaagatacacagatccgctcagtgacgga
atgctaaacgacagcacacgactgaacagcaccaaagcagaggaggagagcgaatatgaa
gttggtagcagcagacttgtcgggcatgaggaaaacagcatcggcccagccactgcagta
aatatggagaaagaatccccttttgtatctcttaactcttcgggttactggtccgatatg
caaagccagtctcttgaaacagacagagaatctactcatggagataaaatggctgtaggt
aaatgggagcatcagcctgaatcacggtcactgaaccaggacacagattgtgaagatcat
ttgctaggatcctctgtgaaacaacaatttcctaaagatgtgacattatcatactgtgtt
atcagtcaaaaatcaggacttgtcgatcatgagcttcaaggggctacaagaaggaggctg
tgcattctggaaagcgaaaccaaagatgttggcgcgcttttcaatgaattatcatcgcga
ctgatttcaattcacgcagagaaggacctctttgttctcacctttaagactgttgaggaa
atttggaaatttacaacttacctttccctaggatttgtcggtcgctgtttggaaaacttg
ttgttagaccaacatttctggttgaatgtctctcttgtggaagatgtgaagattcaggtt
aaagtaaatgaagtacatttgtcactgatgtatttggatcttctgttacaggaaggtcac
tttttcaccagagccttatccaacattccaaagagtgaggagcaagatatgaacatctgc
aaggacgatctcatcatggttaaagatgttgggaatgactccaagtgggaagcaaccaca
cttttaacaaatgaaaagggtttcattcccgtttctgctccacaggcccttctctaccca
ttttaccagtggttcttgaagacgagaggagggaactttggtgaccatgaggaatataaa
caacaccactttccccattcaattggtactggtacctgtgtcgcaaccgtagattacaaa
gagggtgaggtggatgaattgtgcttcagtgaaggagaaacgattcagataattggcttt
cttctttctaacctgcggtggtttttggggaagtctttatccactggattaactgggttt
gtaccagtagagcatgtgcagccagaccagttcaaaacactggaaagccatcttctattc
ttaagtgatgaagaaaagtcttctttgaacatgttcagaaaacctgatgaagagcattgc
atcaatctcctgaacaaactctcccaaactgatgtggacactgtttatcgcttaggggaa
ttacttcctttcacatatgatcagcacctcctgtctaaccaagatggacttactcctgcc
aacaacattcctgatgtgaacccttcaaaatacaaggaaatagaacaaatcgttccagaa
aaggatcagcccaatcatccaatattttatatatgccttagtattgaagagatgaatgat
cccgaagtctttgacccattattattatttctaaaccaaaaggaatacattccacatttc
agacatttctatgacttgaacttttctttcttaggctccatcttgtatggaataactgaa
gagaaagaagttttgcagtacttggaaatggcaagggagatggccaaaatgcatgacaaa
cattgggcatactgccgaatctgtttcctgttgggaagactctgtgctaaaagactcaga
ttctcacaggccagaatatactttgaagaagcaatgactctggtacaagggacattttcc
gacctctatctgttgactgctttatatgtgaacttggcatctgtatacttgaagctaaaa
atgaaagtgaaatctcacacccttgtggaaaaggctgcaactctccttctgtgcatcccg
tcccatgccttcagttcagagaatgagctggacatacttaacattctcctcaaaaaagca
atgattgtcaatgattatcacctggaggcacgtagttgttttctaatcgcaaaactattt
ttagaaagtgggaagtctgaagagacactgttgtttgctgaacatttgcagtttctttca
aatagtttcagttcacaaagcaacatagtcccaatagatgtgcacttgattctaagttac
atatacaacaaaaagtgcttaccacagcttgcactggcagctctaagattttctcaacct
ggctcaagtagcacgttgtttggttctttgcagaaggcggactttgttattgaaacaatt
gcaaagtttaactcacaagaaatgtgtatgggtgaaatcccttcacaggctgcattttac
cttcacgaggctctagatctctcatttagaattggcaacattgacatcctgtgggatttg
aactttgcgttggctaatttatatcagcaacataagctgtatgaaagggcaattaattac
atgaaaaagtgtgcagaagtagcaagctgcaccagtgatggaggagcttacaaagcctat
ctttctcttgcatggttatatgttctaaataatcagcctatcttagcaacagaaatattg
aattcgcttttggaatcgtcgcttgaaacacacaaccctatacaacagggaattgttcac
aacatgctggcgctctctctaagaaagcacaccaggctaaaagaagcaatggaaaactgc
tattgtgcaatagtaactgcagaagaaagtggcataaaatgtaaccaagccattgctcat
gctaactttgggtctctgactctgtgttgtaaaattcttgcactgcctggacgctacctc
agaaaatcgttaaatctgtatttacaaatgcaagactgctgcttggaagtaggttatgtg
caagttctcctgagtttggggcaatactacatagacagaggcatgagaaacgatgggaga
ctgcattatgaactagcacttcttactgccatgaaaaccaacaatgttcattaccaaatc
caggccatggaacaactctgcagattctgtggaaaggttttacatgataaaatgcaatgc
attacatattatgagcactggttggtactcactcagaggttaaaggacaaagaacaggaa
atgaaaatgttgaccattctaagtcatctttgcttttcatgtaacacacaaagttcctac
aggttatctctcagctacaccaaacagaacctgaagaactttattgatctgggaatgcac
agcaaggaggcagaagcctggttgatggccggcaaaacgtattacatgatggaaaaagat
gaactagtcgaactatacttacaggctgctgtgcagacagctgagagaatggagaacatg
cactttaccatgacaataaatgaagcggctggtgatgtgttttacaatggacccagagaa
cgagagaaagcagaatcattttatcgggatggggctgtacctctggcaagggtgaagaaa
gaccttgatgtagagctcagactctttaacaaactgactgaacttaacatttctttaaac
catcttgatcaagctctagattatgcaaagacagctgtaagactcagtataaacactgga
gaccaactaaaggaacgtgttgctttttatcgactagccacggtgtactatttgtttcag
cagtatgagatggctgaaaactactacctgaaggctctgtccctgagttcgcacatattg
ctgtttgcaaaggaagcaaagtactatgtgaaaatttatttcagactgggtgatattaca
cttcacaaattcaaggacccttacgatgctgctggctatttccaaatggcatttgctgca
gctattgaactaggaagcaaggaagatttgtttaatatttgtactaaacttgccaacatt
tacaagaactacattgtgaatgaagatctatgttctcaatttgtcgagaaagcaaagcta
ctaagcactaagctacacaaaaacaagcagaacacatga
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