Leucoraja erinaceus (little skate): 129701676
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Entry
129701676 CDS
T09122
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri03015
mRNA surveillance pathway
leri04261
Adrenergic signaling in cardiomyocytes
leri04382
Cornified envelope formation
leri04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129701676
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
129701676
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
129701676
09158 Development and regeneration
04382 Cornified envelope formation
129701676
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
leri01009
]
129701676
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
leri03019
]
129701676
03036 Chromosome and associated proteins [BR:
leri03036
]
129701676
Protein phosphatases and associated proteins [BR:
leri01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
129701676
Messenger RNA biogenesis [BR:
leri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
129701676
Chromosome and associated proteins [BR:
leri03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
129701676
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_THOC3
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_IFT122_1st
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_WDR3_1st
Beta-prop_EML
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_1st
DSE1_N
Beta-prop_HPS5
SH3_14
Motif
Other DBs
NCBI-GeneID:
129701676
NCBI-ProteinID:
XP_055498997
LinkDB
All DBs
Position
1:complement(124860603..125141444)
Genome browser
AA seq
503 aa
AA seq
DB search
MQHAHTIAAAAATQRSCFTESPQAANAAVHLFKVLLKPATCSAIVLNSAAAFQQIPHRIL
FEEFLTERLIGPFHCRTGYADIISTVEFNHTGELLATGDKGGRVVIFQREQETKSQPHHQ
GEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQQNAAHFLLSTNDKTIKLWKVSERD
KRPEGYNLKDEEGRVKDLSTVTVLQVPVLKPMDLMVEVTPRKIFANAHTYHINSISVNSD
CETYMSADDLRINLWHLGITNRSFNIVDIKPVDMEELTEVITAAEFHPHHCNLLVYSSSK
GTLRLCDMRTAALCDKHAKLFEEPEDPSNRFFFSEITSSVSDVKFSHSGRYMMTRDYLTV
KVWDLNMENKPIETYQVHDYLRSKLCSLYENDCIFDKFECVWNGSDSVIMTGAYNNFFRM
FDRNTKRDVTLEASRENSKPRAVLKPRKVCTGGKRRKDEISVDSLDFNKKILHMAWHPTE
NIIAVAATNNLYIFQDKVNSEMH
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgcagcatgcacatacgatagcagcagccgccgccacacagcgctcctgctttacagag
tctccacaggcagctaatgcagcagtgcacttattcaaagtgctgctcaaacctgccact
tgctcggcaattgttttaaattctgcagcagcattccagcagattccgcacaggattttg
tttgaggagttcctgactgaaagactgattgggccttttcactgcagaactggatacgct
gatataatttctactgtcgaattcaaccacactggagaattgctggctacaggggacaaa
gggggtcgtgtagtgatatttcagagagagcaagagacaaaaagccagcctcaccatcaa
ggtgagtataatgtttacagcactttccagagtcatgaaccggagttcgattacctaaaa
agcctggaaatagaagaaaagatcaacaagattcggtggttgcctcaacagaatgcagcc
cacttcctcctctcgaccaatgataaaacaatcaaattatggaaggtcagtgaaagggac
aagaggccggaaggttataacctcaaagatgaagaaggtagagtgaaggatttatcaacg
gtcacagtgctgcaggtcccagtactgaaacccatggatctgatggtggaggtgactcca
cggaagatttttgctaatgcccatacctatcacatcaactccatttcggtcaacagtgac
tgtgaaacatatatgtcagccgatgacctcaggataaacctctggcacttaggaataaca
aataggagtttcaacattgtagatattaaaccagtagacatggaagaattgactgaagtg
atcacagctgcagagttccaccctcatcactgtaacctcttggtttacagcagcagcaaa
ggaaccctgcggctctgtgacatgaggacagctgcactgtgtgataaacacgccaaattg
tttgaggagccagaggatcccagtaaccggttcttcttctcagagataacctcttccgtg
tctgatgtgaagtttagtcacagcggacggtacatgatgacacgtgattacctcactgtc
aaagtctgggatctcaacatggaaaacaagcctatagaaacatatcaggttcacgattac
ctccggagtaagctctgttccctttatgagaatgactgcatctttgacaagtttgaatgt
gtgtggaatggctcagacagtgttattatgactggtgcctacaataatttcttcaggatg
tttgaccgcaacactaaacgagatgtcaccctggaagcttccagggagaacagtaaacca
cgggctgtcctgaagccacggaaagtctgcacgggaggcaagcggagaaaagatgaaatt
agtgttgacagtttagactttaacaagaagatcctgcacatggcctggcatccaactgag
aacataatagcagtggcagcgacaaacaatctctacatatttcaggataaagtgaactcg
gagatgcactag
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