Leucoraja erinaceus (little skate): 129701678
Help
Entry
129701678 CDS
T09122
Symbol
pde6a
Name
(RefSeq) rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha
KO
K08718
rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha [EC:
3.1.4.35
]
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri00230
Purine metabolism
leri01100
Metabolic pathways
leri04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
129701678 (pde6a)
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
129701678 (pde6a)
Enzymes [BR:
leri01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.35 3',5'-cyclic-GMP phosphodiesterase
129701678 (pde6a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDEase_I
GAF
GAF_2
HD-CE
DUF6115
DUF4642
LON_substr_bdg
Motif
Other DBs
NCBI-GeneID:
129701678
NCBI-ProteinID:
XP_055498996
LinkDB
All DBs
Position
11:35763068..35805459
Genome browser
AA seq
855 aa
AA seq
DB search
MSMAKEDVEKFLDSNPTFAKEYFDSKLRPLHIANLLGAQETNADFSTFRDLNNVEESEII
FELIRDLQDINMEKVVFNTLRRIGFLIRADCLSLFMYRSRNGTPELATRLFNVHNDSIFE
DCLVPPECEIVFPLDTGIIGHVAQTKKTINIHDKAKDDHFSSFVDAVAQYETKNVLATPV
MNGKDVVAVVMAVNKIDGPHFTTKDEEILLKYLNFINLTLKIYHLNYLHNCETRKGQVLL
WSASKVFEELTDIERQFHKALYTVRGFLNCDRYSVALLDMTKEKEFFDLWPIQMGEVPEY
DGPKTPDGREIIFYKIIDYILHGKEEIKVIPSPPADHWALVSGLPSYVAETSLICNVLNA
GADEFFHFQKEPLDALGWTIKNVLSMPIVNKKEEIVGVATFYNRKDGKPFDDMDETLMEA
LTQFLGWSVLNTDTYDRMNKLENRKDIAQDMVNYHIKCSKDEIQDILKTRELYEREPNEC
DEEELQELLYEELPDADQAEIYEFHFCDFEWSPLDLVKCGIQMYYELGVVDKFHVPQEVL
VRFMYSLSKGYRKITYHNWRHGFNVGHTMFTLLTTGNLKSYYTDLEAFAMVTAAFCHDID
HRGTNNLYQLKSQDPLARLHGTSIMERHHLELSKTLLQDEDLNIFQNLNRRQYEHALRLM
EIAIIATDLALYFKKRTMFQKIVDLSETYENPQEWVDFMILQTTRKEIIMAMMMTACDLS
AITKPWEVQSKVALSVAAEFWEQGDLERTVLEQQPIPMMDRNKAAELPKLQVGFIDFVCT
FVYKEFTRFHSEIEPMYKGILNNRKEWKALADEHEAKMKAIEEEKTRKEEEQAAKQAGNT
SQKEQSSQSKTCHLL
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atgagcatggccaaggaagatgtggagaagttcctggatagtaatccaaccttcgccaag
gaatacttcgactcaaaactacgccctttacacattgctaacttgctaggagctcaagaa
acaaatgcagactttagcaccttccgagacctgaacaatgtggaggaaagtgagatcatt
tttgaactcatccgtgacctgcaggacattaatatggaaaaggttgtgtttaatacacta
aggaggattggctttctcatccgagcagattgcctgagtttgttcatgtacagatccagg
aatggcactcctgaacttgccacaagactgttcaatgttcataacgattctatttttgaa
gattgtttggttccacccgaatgtgaaattgtttttcctcttgacactgggatcattggg
catgtggcacaaacaaagaaaacaataaacatccatgataaagctaaggatgatcatttc
agtagttttgtggacgctgttgcacagtatgaaaccaagaatgttctggcaactccagta
atgaatggcaaggatgttgttgctgttgtaatggctgtaaacaaaatagatgggccacat
ttcaccacgaaagatgaagaaattttgttaaagtatctcaattttattaacttaacactc
aagatctatcatctgaattatctccataactgtgaaaccaggaaagggcaggtacttttg
tggtctgcaagcaaagtatttgaagaacttactgatattgaacgacagtttcacaaagcc
ctttacactgtgcgaggctttttgaactgtgacagatactcagtggcgctcctagacatg
acgaaagaaaaggaattttttgatctctggccaatacaaatgggtgaagtaccagagtat
gatggaccaaaaacacccgatggaagggaaataattttttacaaaataatcgattacatc
cttcatggaaaagaagaaattaaagtcatcccgagtcctcctgcagatcactgggctctg
gtcagtggactgccatcatatgttgcggaaactagtcttatatgcaatgttttgaatgca
ggtgcagatgaattctttcattttcagaaagaaccactcgatgccttgggatggactata
aagaatgtgctctcaatgccaatagtaaacaagaaagaggaaattgtgggtgttgctaca
ttttataacagaaaggacggaaagccctttgatgacatggatgaaactctgatggaagcc
ttgacacagttcctcgggtggtctgttttgaacactgatacatatgacagaatgaacaaa
ttagaaaaccgaaaagacattgcccaagacatggttaactaccacattaaatgctctaaa
gatgaaatacaagacatattgaaaactagagaattatatgagagggaaccaaatgaatgt
gatgaagaagaacttcaagaattactgtatgaagaacttccagatgccgatcaagcagaa
atctacgaatttcacttctgtgattttgaatggtctccactggatcttgtgaagtgtgga
atacagatgtattatgagcttggtgtggttgataagttccacgtacctcaagaggtatta
gttcgtttcatgtattcactgagtaaaggatacagaaagatcacctatcacaactggcgg
catgggttcaatgttggacacaccatgtttacactgctcactactggaaatctaaaaagc
tactatacagatctggaggcatttgccatggtgacagctgcattttgtcatgatattgat
cacagaggaacaaacaacctctatcaattgaagtcgcaggatccattggcaagacttcat
ggtacatcgattatggagcgccatcacttggagttaagtaagaccctgctccaagatgag
gatttgaatatctttcaaaatctcaacagaagacaatatgaacatgcactccgtctgatg
gagattgcgatcattgctacagacttggcactttatttcaaaaaacgaacaatgtttcaa
aagatagtcgacctatctgaaacatatgaaaaccctcaggagtgggtcgactttatgata
ctgcaaacaacaaggaaggaaattatcatggccatgatgatgactgcatgtgacttgtct
gccatcacaaaaccatgggaagtacagagcaaggtagctctttctgtagcagctgaattc
tgggaacagggagatttggagcggactgttctagaacaacaacccattcccatgatggac
agaaacaaagctgctgaacttccaaaacttcaagttggtttcattgactttgtgtgcaca
tttgtgtacaaggaattcacccggtttcactctgaaattgagccgatgtacaaaggcata
cttaacaacaggaaggagtggaaggcattggctgacgaacacgaggcaaaaatgaaagcg
atcgaggaagaaaaaacacggaaggaagaagaacaagcagcaaaacaagcaggcaacaca
tcacaaaaggaacaaagttctcagtcaaagacttgtcatctcttgtga
DBGET
integrated database retrieval system
