KEGG   Leucoraja erinaceus (little skate): 129701758
Entry
129701758         CDS       T09122                                 
Name
(RefSeq) LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein A1-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
leri  Leucoraja erinaceus (little skate)
Pathway
leri03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:leri00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    129701758
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:leri03019]
    129701758
   03041 Spliceosome [BR:leri03041]
    129701758
Messenger RNA biogenesis [BR:leri03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     129701758
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     129701758
Spliceosome [BR:leri03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    129701758
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3
Other DBs
NCBI-GeneID: 129701758
NCBI-ProteinID: XP_055499142
LinkDB
Position
11:45952047..45953301
AA seq 294 aa
MAREQLCKLFVGGLSFETVEGNLRSHFEQWGKLTDCVVVQDTITRRPRGFGFVTYSSPSE
ADAAMAARPHVLDGRTVDLKRAVPREDSNKPGFNMKVKKIFVGGIKENLDENDLQSYFSD
YGLIEKVDVICDRDTGKKRGFAFVYFDDHDSVDKAVIQKYHMINGYRCEVKKGLSKEEMQ
SEVDLAVEVAAFPKETVGVMAILAILAGTGRKAAAAAAAATTMREEVEETSMVVMVMGGI
PGVTVPFQEVVTVIAFVIMAFRPMVAKEVTITIISTIPMITLEATPLSRPTMAQ
NT seq 885 nt   +upstreamnt  +downstreamnt
atggcgagggaacagctctgtaagctatttgttggcgggctcagcttcgaaacggtggaa
gggaacctgcggagccacttcgagcagtggggcaagctaactgactgtgtcgtagtccag
gacaccatcaccaggcgcccccgaggcttcggctttgtcacatattcgtcgccgagcgag
gcggatgctgcaatggctgctaggcctcatgtcttagatggccgcacggtagacctgaag
cgagctgtgccaagagaagattcgaacaagcctggcttcaacatgaaggtaaagaagatc
ttcgttggcggcataaaggaaaacctcgacgagaacgatctgcagagttatttctcggat
tatgggttgattgaaaaagtggatgtgatctgcgaccgagacactggcaagaagagaggc
tttgcctttgtgtacttcgatgaccacgattctgttgataaagctgtaatccagaagtac
cacatgattaatggctaccggtgcgaagtcaagaaggggttgtcgaaggaagagatgcag
agcgaagtagacctcgcggtcgaggtggcagctttccccaaagaaacggtcggagtgatg
gcaattttggcaattctggcgggtacgggccgcaaagcggcggcggcggcggcggcggct
actacaatgagagaggaggtcgaggagacctctatggtggttatggtgatggggggtatc
cccggcgtgaccgttccttttcaggaggtagttacggtgatcgcattcgtgattatggct
ttccggcctatggtggcgaaagaggttacaataacgataatttcgacgatacctatgata
actttggaagctactcccctgagccgtcccactatggcccaatga

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