Leucoraja erinaceus (little skate): 129701813
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Entry
129701813 CDS
T09122
Name
(RefSeq) interferon regulatory factor 1-like
KO
K09444
interferon regulatory factor 1
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
129701813
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
leri03000
]
129701813
Transcription factors [BR:
leri03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
129701813
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF
Motif
Other DBs
NCBI-GeneID:
129701813
NCBI-ProteinID:
XP_055499252
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All DBs
Position
11:52296389..52307817
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AA seq
325 aa
AA seq
DB search
MPVARMRMRPWLELQIDSNKIPGLCWINKDRRTFQIPWKHAARHGWNLETDACLFRNWAV
HTGRFKQGMDKPEPKTWKANFRCAMNSLPDIEEVKDKSVNKGSSAIRVYRMLVLSTQKEK
RPRLCKEIKSKNKRTKSKIKEEAPESAAITLPTDHTTYTATEQYTSQEMVADSTVSIEEF
VSSESHAAVHQLSEWNRNGMGEECEPIARSCDLYQFQISPLPSPTADRFLSGEECTVELV
PENSTWEHNTIEGRGYYSNGMGTTPLNIAGCDIRTSEQESLHPLFDDAIEFIEYDFRPQL
EMRSGMDLLNMIDSNWQTGTLIGCI
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtggcaagaatgcgcatgagaccttggttggaattacaaatcgattctaacaaa
attcctggattgtgttggataaataaggatcgacggacattccagattccgtggaaacat
gctgctcgacatggatggaacctggaaactgatgcgtgtcttttcaggaactgggctgta
catacagggagattcaagcagggaatggacaaacctgaacccaaaacatggaaagccaat
ttccgttgtgctatgaattctttgcctgacatagaggaagtgaaggacaagagtgttaac
aaaggctccagtgcgattcgagtctacagaatgcttgttctgtcaacccaaaaagaaaag
aggccccgtttgtgcaaagaaataaaaagcaagaataaaaggacaaagtcaaagatcaag
gaagaagcgccagaatctgcagcaataacattaccaactgatcacaccacatacactgca
acagagcaatatacttcacaggaaatggtggctgacagcactgtgtctatagaagaattt
gtttcatcagaatctcatgcagcagtgcatcaactgtcagaatggaatcggaatggcatg
ggagaggagtgcgagcccattgccaggtcttgtgacttgtatcagttccaaatctctcct
ttaccctctcctacagctgaccgcttcttgtcgggagaggaatgcacagtggaattagtg
ccagaaaacagtacgtgggagcacaacaccattgaaggaaggggttactatagcaacgga
atggggaccactccactaaatatcgctggatgtgacattaggacaagtgagcaagaatcc
ttgcatccgcttttcgatgatgcaatagagtttatagaatatgacttcaggccacagttg
gagatgaggtcaggaatggacctattgaatatgatagattcaaattggcaaactggaact
cttattggttgcatttga
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integrated database retrieval system
