Leucoraja erinaceus (little skate): 129701829
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Entry
129701829 CDS
T09122
Name
(RefSeq) PDZ and LIM domain protein 4-like
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
129701829
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
leri04990
]
129701829
Domain-containing proteins not elsewhere classified [BR:
leri04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
129701829
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
129701829
NCBI-ProteinID:
XP_055499274
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All DBs
Position
11:complement(53167336..53240965)
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AA seq
329 aa
AA seq
DB search
MPHPVTLYGPSPWGFRLVGGKDYSQPLTISRVTPGSKASSANLCPGDIIVAINDDSTENM
SHLDAQNKIKACMDQLTLSINRNENKPWSPNGIEDGSTRPFQNSLQAQPQECRATGSPNS
RKPTPFTMSTNVNEGRQLANAQYNTPAALYTNDNIDHSLPEQLSGLHVASPHIESPKLSP
KLWNEVDTESDVYKMLRDGEEPPSEPKQSGSFKMLQGMLEAEQTGERSERPTAIKSIKSP
VTKFSNAPPTLQRLPHCTRCETAIVGAVIKAREKIYHPACFMCSDCGLNLKQKGYFFIEE
QLYCETHAKARVQPPEGYEVVAVYPNSRV
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcctcaccctgtgactctgtacggaccttcaccatggggctttagattagtaggaggc
aaggattatagccagcccttaacaatatcgcgggttactcctggaagtaaagcctcctca
gcaaacctgtgccccggagatatcattgtagctatcaacgatgacagcacggagaatatg
agccatctggatgcccaaaacaagatcaaggcatgtatggaccagcttacactttctata
aacaggaatgaaaacaagccctggtccccgaatggtattgaagatggaagcactcggcct
ttccaaaactctctccaagcacagccgcaggaatgcagagcaactgggagtccaaatagc
aggaagccgacgccattcacaatgagcacaaatgtgaatgagggcagacagcttgctaat
gcacagtataacacacctgccgcactctacaccaatgacaacattgaccactcgttaccg
gagcagttaagtggccttcatgttgcctcgccacacattgaatctccaaagttatcaccc
aaattatggaatgaggttgacactgaatcggatgtttataagatgctccgtgatggtgag
gaacccccttcagaacccaaacagtcgggatctttcaaaatgttgcagggaatgctggag
gctgaacagacaggtgagagaagtgaaaggccgactgccatcaagagcatcaaatctccg
gtcacaaaattcagcaatgctcctcccacactgcagaggttaccacattgtaccagatgc
gagactgccatagtgggcgctgttattaaggcacgggagaagatatatcatcccgcttgc
ttcatgtgttctgactgtggattaaatctgaagcagaaaggatatttcttcatcgaagag
cagctatattgtgagacccatgcaaaagcgagggttcagccacctgaaggatacgaggtg
gtagctgtgtatcccaactccagggtgtaa
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