Leucoraja erinaceus (little skate): 129701843
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Entry
129701843 CDS
T09122
Name
(RefSeq) protocadherin-10-like isoform X1
KO
K16499
protocadherin delta 2
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
leri04515
]
129701843
Cell adhesion molecules [BR:
leri04515
]
Cadherins
Protocadherins
129701843
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
129701843
NCBI-ProteinID:
XP_055499298
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All DBs
Position
1:complement(130974208..131045713)
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AA seq
1007 aa
AA seq
DB search
MTFLLFLLCILIDRVACQIRYSVPEEQEHGTFVGNIAEDLGLDVTKLAARRFQTVPSSRT
PHLEVNLENGVLFVNEKIDREQICKQSPSCMLHIEVFLENPLELFRVEIEIVDINDNPPS
FPEADITVEISENAGAGTRLPLESAFDPDVGTNSLRTYEITPNSYFYLDVQTQGDGNKFA
ELVLEKNLDREQQALHRYVLTAVDGGMPQRTGTALLSIKVLDSNDNVPVFEQSVYTVSLS
ENAPVGTLVIQLNATDRDEGKNGEVVYSFSNHVSPRVKELFSIEPRTGWIEVKGTIDYEE
SSLYQLFVQAKDLGPNAVPAHCKVLVKVTDANDNAPEISFSTVSDSVNESATLGTVVALL
SVTDRDSGDNGQLQCEILGQVPFKLKPSFKNYYTIVTDGPLDREITDSYTVTIMAKDRGS
PPLASSKSIKVQVADENDNAPRFSRSSYDVHVSENNVPGAYIYAVTAVDPDLGQNAYISY
SILECDIQGMSVFTYVSINSENGYLYALRSFDYEQLKEFSFTVQARDAGNPPLISNTTIN
IIIVDQNDNAPSIVSPVSRNGSAKEMVPRSAEPGYLVARLVAVDADDGDNARLTYYIAKG
NELGLFRMDWRSGELKTVRRLPANKKAPSAPYELLIEVRDHGQPPLSATATILVIVVDSP
VDRQGERGNRAGSPKENSLDLTLILIIALGSVSFVFLLAMIVLAIRCQKDKKVNIYSCLA
SECCACCRQARNRKKKLSKSDIMLVQTTNTNAAQVAVEEGGFGHHSQNYCYQVCLTPESA
KTDLMFLKPCSPVRSTDAEHNPCGAIITGYTDQQPDIISNGSILSNETKHQRTELNFLVD
RPRRVNSSAFQEADIVSSKDSGHGDSEQGDSDHDATNRAHNTGADLFSNCTEECKALGHS
DRCWMPSFVPTDNRQGPDYRSNLHVPGMDSVPDTEVYEAPEQPGEKSFSTFGKDKMHPAN
LEKKEYDALLPNTRAPYKPPYLRRMCLRWRHAEKLHQIDSRDEEANV
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atgaccttcctattatttttgctttgcatcctgatcgatcgcgttgcctgtcagatccgc
tattccgttcccgaggagcaggaacatggcacgttcgtggggaatatcgccgaggatttg
ggcttggacgtgaccaagctggcggcccgcaggttccagacggtgccgagctcccggacc
ccgcacctggaggtgaacctggagaacggggtgctcttcgtcaacgagaagatcgaccgc
gagcagatctgtaagcagagccccagctgcatgctgcacatcgaggtcttcctggagaac
ccgctggaacttttccgtgtggagatcgagatcgtggatattaacgacaacccgccgagt
ttcccggaggcggacatcacggtggagatatcggagaacgccggtgctggcactcggctg
ccgctggagagcgctttcgacccggacgtgggcaccaactcgctccgcacctacgagatc
acccccaatagctacttttacctcgacgtgcagacccaaggagacggcaacaagttcgcc
gagctggtgttggagaagaatctggaccgggagcagcaggctctccaccgctatgtgctg
acggcagtggacggggggatgccccagcgcaccggcaccgcactgctcagcatcaaggta
ctggactccaatgacaacgtgcccgtcttcgaacagtccgtctacacggtgagcctgtcc
gaaaacgcgcccgtcggcaccctagtcattcagctcaacgccaccgaccgcgacgaaggc
aaaaacggcgaggtagtgtactcgttcagcaaccacgtctcgcccagggtgaaggagctg
ttcagcatcgagcccaggactggctggatcgaggtgaaggggaccatcgattacgaggag
agcagcctgtaccagctgttcgtccaagcgaaggacctgggacccaacgcggtgccggct
cactgcaaagtgctggtgaaagttaccgacgcgaacgacaacgcgcctgagatcagtttc
agcactgtttccgactctgtgaacgagagcgcaaccttgggcaccgtggtcgccttgctg
agtgtcaccgaccgcgactcgggtgacaacgggcagctccagtgcgagatcttggggcag
gtgcctttcaaattgaagccctcgttcaagaattactacaccatcgtgactgacgggccg
ctggaccgagagatcaccgactcatacactgtgaccatcatggcgaaggaccgagggtcg
ccccctctggcgtccagcaagtccatcaaggtgcaagtggcggacgagaacgataatgca
ccccgcttctcccgatcttcctacgacgtgcacgtttcagagaataatgttccaggggct
tatatttacgcagtgactgccgtagaccccgacttggggcagaacgcgtacatctcttac
tccatattagagtgcgatatacagggtatgtcggtcttcacttacgtttccataaactcc
gagaatggctatctgtacgccttgcgctctttcgactacgagcagctgaaggagttcagt
ttcacggtgcaggccagggacgcaggaaaccctcctctaatcagtaacaccaccatcaac
atcatcatagtggaccagaacgacaacgcgccgtctatcgtatcgcccgtgtcgaggaac
ggcagcgccaaagagatggtgccccgctcggctgagccgggctacctggtagccagactg
gtggcagtggacgcggacgatggtgacaacgctcggcttacctattacattgccaagggt
aacgagctgggtctcttcaggatggactggagaagtggagagctcaagaccgtcaggagg
ttacccgccaacaagaaggcccccagcgccccgtacgagctcctgatcgaggtcagggac
catggacaaccgcccctgtcagctacggccaccatccttgtgattgtagtggacagtccc
gtggaccgacagggtgaacggggcaaccgagctggtagcccgaaggaaaactcgctggat
ttgaccctgatcttgattatcgccctgggctcggtgtccttcgtattcctgctagctatg
atcgtgctggccatccgctgccagaaggacaaaaaggtgaacatctacagctgcctggcc
agcgagtgttgcgcctgctgccgccaggcgaggaacaggaagaagaagctcagcaagtcg
gacatcatgctagtgcagaccaccaacaccaacgcggctcaagtggcggtggaggaaggg
ggctttggacaccatagtcagaattactgttaccaagtttgcctgactccagaatcggcc
aaaacagatctcatgttcttgaaaccgtgtagcccggtcaggagtacagacgctgaacac
aacccctgcggggccattattacagggtacaccgaccagcagcctgacatcatttccaat
gggagtatattatcaaacgagacaaaacaccagcggaccgaactcaattttcttgtggac
agaccccgccgagttaacagttctgctttccaggaagcggatatcgtgagttcaaaggac
agtggtcacggtgacagcgaacaaggcgacagtgaccacgatgctaccaaccgagctcac
aacactggagctgacctcttttccaattgcacagaagagtgtaaagcactgggacactcg
gaccgctgctggatgccgagctttgtacccacagataaccgccaaggtccggattatcgt
agtaatttgcatgtccctggcatggactcagtgcctgacactgaggtctatgaagctcca
gaacagcctggagagaagtccttctctacatttggaaaagataaaatgcatccagcaaat
ttggaaaagaaagaatatgatgcacttctgcccaacacacgtgcgccttacaagccacca
tatttaagaagaatgtgcttgcgttggaggcatgcagagaagcttcaccagattgattcc
cgggacgaagaggccaacgtatga
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