KEGG   Leucoraja erinaceus (little skate): 129701999
Entry
129701999         CDS       T09122                                 
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein-like isoform X1
  KO
K12842  U2-associated protein SR140
Organism
leri  Leucoraja erinaceus (little skate)
Pathway
leri03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:leri00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    129701999
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:leri03041]
    129701999
Spliceosome [BR:leri03041]
 Complex A
  U2 snRNP components
   U2 related factors
    129701999
 Complex B
    129701999
SSDB
Motif
Pfam: Surp RRM_1 cwf21 CID CTK3 RRM_7 YciZ
Other DBs
NCBI-GeneID: 129701999
NCBI-ProteinID: XP_055499437
LinkDB
Position
12:complement(2795397..2843400)
AA seq 1028 aa
MEESGTLPGRNDSKMAENKLKNLASKRTLSKKGQEELRKKEEELKAAEIYEEFLASFDSG
GTGNVKTFVRGGIVNAAKDENERSERRAKLYKPKAKFGEIKTSQQEVPCAPPAVSAEAKK
PIVKKVKDEKKKSNLEIFKEELKQIQEEREERHKNKRKVKEGNLRPSRFEPMPAEVEQQM
NRRVLLDETPGSYDSGDPHTTNLYVGNINPQMDEEMLCKEFGKYGPLASVKIMWPRTEEE
RARLRNCGFVAFMNRKHADKALKSLNGKFIMGYEMKLGWGKAVPTPPYPIYIPPAMMELT
LPPPPSGLPFNAQPRARLRNPDMPLPPSNSKEEFEKTLSEAVVKVVIPTERNLLCLIHRM
IEFVVREGPAFEAIIMNREINNPQFRFLFKNKDPAHVYYRWKLFSILQGDSPTKWRLEDF
RIFKCGSMWHPPPMNPYLQGMPEDGEGEVPVEPEEPVKKGQLKDEQRDKLENVLRGLAPH
RNDIGDAMVFCLNNAEAAEEIVDCIAESLSILQTPLQKKIARLYLVSDILYNSCAKVANA
SYYRKYFETKLPQIFTDLHEAHKVIQARLQAEQFKQKIMTCFRAWEDWAVYPEPFLIRLQ
NIFLGLMKQDEDAMERPLVHDDVDGAPIMDGHISPLDDVDGLPIDGIPLDGVLLDDIDGI
PLKSVDDDLDGMPMEDNLVQKKEEPFLKIAPSKWETVDESELEAHAITTSKWDLLDHTES
EEKGEIKIWRNSPHSKVTSLHHTSQKGGSCREEIREEEEEEEEEEGEEEVDGCEMEDEVV
LKEEPFDSKCQKMLDLSEEKRARLREIELKVMKFQDELESGKRTKKSGMTFQQQVEHYRS
KLLQKGKEKDQDKDLEKEVCDTERIRETYKEKDRKEKDRTEEKIKEKDKIKGKEKDKNKL
KIKEKERNKDRSRAKEKHRDKGNSLSPSRRRRCTSSPSPSRSIRCEISMSPWSERSLLKE
NTLSRSPSPVYKESPRHSSKRKKRSWSRSKSPKKSKHSRSSSPKKSRRSRSRSRTPHRSH
KKSKKSKR
NT seq 3087 nt   +upstreamnt  +downstreamnt
atggaggagtctggcacattacctggaaggaatgattcgaaaatggcagaaaacaagctg
aaaaacttggcttcaaagaggaccctaagtaaaaagggacaggaggaactaagaaagaag
gaagaggagctaaaagcagctgaaatctatgaagagtttttagcctcgtttgactctggt
ggtacaggcaatgtaaaaacttttgtgaggggtggcattgtaaatgctgctaaagatgaa
aacgaaaggagtgaaagacgagcaaaactctataaacctaaggctaagtttggtgaaata
aaaacttcacagcaagaagtaccttgtgcaccacctgctgtttctgctgaagcaaagaaa
cctattgtcaaaaaagtaaaagatgaaaaaaagaagagtaatttggaaatattcaaagaa
gagctcaagcagattcaagaagagcgtgaagagagacataaaaataagaggaaggtgaag
gaaggaaatttaagaccaagtagatttgagccaatgcctgctgaagttgaacaacaaatg
aacagacgtgtcttgctcgatgagactccaggatcatatgattcaggggatccccatact
acaaacctgtatgttggcaacataaacccacagatggacgaagagatgctttgcaaggag
tttggtaaatatggacctttggcaagtgtaaaaattatgtggcctagaaccgaggaggag
cgagctcgactacgaaattgtggttttgttgcctttatgaacagaaagcatgcggataaa
gcccttaaatctctcaatgggaaatttataatgggttatgaaatgaagctgggttggggg
aaggcagtgcccacccctccataccctatatacattccaccagctatgatggaattgact
cttcctcctcctccatcgggtttaccttttaatgcacagcctagagcgaggctgaggaac
cctgatatgccactcccaccatcaaactccaaggaggaatttgagaagactctgtccgaa
gccgtagtcaaagtggttatcccaacagaaaggaatcttttgtgcctaattcatcgaatg
attgaatttgtagttcgtgaaggtccagcctttgaagctataattatgaatagagaaatc
aataacccccagtttagattccttttcaagaacaaggacccagcacacgtttattatagg
tggaagctgttttctattcttcagggtgattccccaacaaaatggcgactggaggatttc
cggatatttaagtgtggttcaatgtggcatcctccacccatgaatccttatttgcaaggc
atgccagaggacggagaaggagaagtgcctgtggaaccagaggagccagtgaagaaaggg
caactgaaagatgagcaaagagataaattggagaatgtcttgagaggtttggcacctcat
cgcaatgacattggtgatgcgatggtcttctgtttgaataatgcagaggctgcagaggaa
atagtggattgtattgcagaatctctgtccattttacaaactcctctgcagaaaaagata
gcaagactgtacttggtgtctgacatcctgtataattcctgtgcaaaagttgccaatgcg
tcttattataggaaatattttgaaaccaagctgcctcagatatttacagatttacacgaa
gcccacaaagtgatacaagcgaggcttcaagcagaacagttcaagcaaaagataatgacg
tgttttcgagcatgggaagactgggctgtttatccagagccttttctcattaggctacag
aatatatttcttggactaatgaaacaggatgaggatgcaatggaaaggccactggtgcat
gatgatgtggatggtgcaccgattatggatggccacatttctccattagacgatgttgat
ggattgccaattgatggaattccactagatggagtacttctagatgatattgacgggatt
cctttgaaatcagttgatgatgaccttgatggcatgccaatggaagacaatctagttcag
aaaaaggaagaaccattcttaaaaattgctccttcaaaatgggaaactgtggatgaatcg
gagttggaagctcatgcaattaccacatcaaagtgggaccttcttgatcacacagaatca
gaagaaaagggtgagattaagatttggagaaatagtccacatagcaaagtgaccagttta
catcacacgagccaaaaaggaggttcctgcagagaggaaataagagaggaggaggaggag
gaggaggaggaagaaggagaggaagaagtggatggttgcgagatggaagacgaggtagtt
ctgaaggaagagccctttgattccaaatgtcaaaaaatgttggacttgtctgaggagaaa
cgagccagactgcgggaaattgaacttaaagtaatgaaatttcaggatgaattggaatct
ggtaaaaggactaagaagtcaggaatgacctttcaacaacaggttgagcattataggagt
aaactattgcagaagggaaaggaaaaagaccaagataaagacctggagaaagaggtttgt
gatacagagagaataagagaaacgtacaaagaaaaagacagaaaagagaaagatagaact
gaagaaaagatcaaggagaaggataaaataaaaggcaaagaaaaagacaagaacaagctg
aaaatcaaagaaaaggaacgcaataaagatcgatcacgggcaaaagagaagcacagagat
aaaggaaattccttgtcaccttccaggagaaggagatgtacgagctcaccaagtccctcc
agaagcatccgatgtgaaatatccatgtcaccttggtctgagagatcactgctaaaagaa
aacaccctgtctaggtcaccgtctccagtgtacaaggagtctccgaggcacagtagcaaa
cggaaaaaaagatcctggtccagatcaaaatctcctaaaaagtcaaagcattctcgctca
agttctccaaagaaatcaagacgatcgcggtcacgctccagaactcctcatcggtctcac
aaaaagtcaaagaagagcaaacgctga

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