Leucoraja erinaceus (little skate): 129702232 Help Entry 129702232         CDS       T09122                                  Symbol pcdh11 Name (RefSeq) protocadherin-11 X-linked   KO K16498   protocadherin delta 1 Organism leri  Leucoraja erinaceus (little skate) Pathway leri03273   Virion - Lassa virus and SFTS virus Brite KEGG Orthology (KO) [BR:leri00001]  09120 Genetic Information Processing   09125 Information processing in viruses    03273 Virion - Lassa virus and SFTS virus     129702232 (pcdh11)  09180 Brite Hierarchies   09181 Protein families: metabolism    01009 Protein phosphatases and associated proteins [BR:leri01009]     129702232 (pcdh11)   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:leri04515]     129702232 (pcdh11) Protein phosphatases and associated proteins [BR:leri01009]  Protein serine/threonine phosphatases   Phosphoprotein phosphatases (PPPs)    Protein phosphatase-1     PP1-interacting proteins (PIPs)      129702232 (pcdh11) Cell adhesion molecules [BR:leri04515]  Cadherins   Protocadherins    129702232 (pcdh11) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin Protocadherin Cadherin_CELSR2_9th Cadherin_2 Fibulin_C Cadherin_4 DUF6249 Motif Other DBs NCBI-GeneID:  129702232 NCBI-ProteinID:  XP_055499866 LinkDB All DBs Position 12:28718065..29468328 Genome browser AA seq 1202 aa AA seqDB search MLDPGMELYLAAAALLVVFVAPGLGQEKDYTVREELPENVLIGNLVRDLNLSDANLPLVF KLVYKTGDTPLIRVEDSTGELFTTSHRIDREKLCANIYSETRCFYEVEVAVLPNEVFKLV KMRFLIEDINDNAPLFPSTVINISIPENTVVNSRYSIPSAVDPDVGINGIQHYELLKGQN VFGLDIIETPEGDKWPQLIVQQNLDREQKDTYVMKIKVEDGGVPPRSSTAILQITVTDVN DNRPVFKESEIDVHIPENAPVGTSVIQLHATDADLGPNAVVRFFFSNQVSVLARRLFTID SATGLITVRQPLDREEFPVHKLTVLASDGSSTPSRAVVTINITDVNDNVPTIDTRYIINP VNGTVLLSENAPLNTKVALITVTDQDSDLNGKLTCFTDHDVPFRLKPVFDNQFLLETAAL LDYESTREYTIKIVASDAGKPPLNQSATVVIKLKDENDNAPVFNQPVIGLSIPENNTPGT QLTKISATDADSGKNAEITYLLGPNAPSIFSVDRRTGILSAMRRLDREKQDRYVFTVLAR DGGRPSIQSNATVIVTVLDQNDNSPSFTHSEYNFYVPENLPMYGTVGLITVTDADAGGNA AVSLSILNDKGYFIIDPTSGVIKPNITFDREQQSSYTFQVKAADGGRPQRTSVARVTINV VDVNDNSPVFVYPPSNFSYELVSTSANPGSVVGKVFAIDNDTGMNAELRYSIVSGNSRGL FAIDPMTGNITLQEKVTTADHGLYRLVVKVIDLGQPESLHAMALVHLFVNETVNNFTFVQ DLVRKSMETPLDKNVGGSQMTPQTNDYIKIVIAIIAGTMTVILVIFVTALVRCRHTPRHK AVQKGKQSGEWVSPNQENRQTKKKKRKKKRSPKNLLLNFVTIEESKPDDPAHEHINGTLD LPVELEDQTMGKYNWATTPTTFKPDSPDLGKHYKSASPQPSFQIKPETPVPVKKHHVIQE LPMDNTFVVGCDSLSKCSSSSSDPYSVSECSCQGGFKTAGPIHTRQSQRRVTFHLPDGSQ ESCSDSGLGDHEPNSSASTSHPLPLGFPQEEYYEQTSPNSRTEGDGNSDPESSVEVSLQK VLGEASETCTQECLVLGHSDNCWMPPSLTQYQQPNPPLPSIGFQQGWARGGRSEGQHAIG RAGSKDDIDKSQGNGRQQLYNGSERHCTTEDPVKVIPLANFTPGQQGSVSRANSPYVHEH QL NT seq 3609 nt NT seq  +upstreamnt  +downstreamnt atgctggacccgggcatggagttgtacctggcggcggcggcgttgctggtcgtgttcgta gccccggggctggggcaggagaaggactacacggtgcgggaggagctgcccgagaacgtg ctgatcggcaacttggtgcgggacctgaacctcagcgacgccaacctgccgctcgtcttc aagctggtgtacaagacgggagacacgccgctgatccgggtggaggacagcacgggcgag ctcttcaccacctcgcaccgcatcgaccgggagaaactctgcgccaacatctacagcgaa acccgctgcttctacgaggtggaggtggcggtgctgcccaacgaggtcttcaagctggtc aagatgcggttcctgatcgaggacatcaacgacaacgctccccttttcccttccaccgtg atcaacatctccatccccgagaacaccgtggtcaattcgcgctactccatcccttccgcc gtggaccccgacgtgggaatcaacggcattcaacattacgagctgctgaaggggcaaaat gtcttcgggctggacatcatcgaaactcccgagggcgacaagtggccccagttgatcgtc cagcagaacttggacagagagcaaaaggacacctacgtgatgaagatcaaagtggaagac ggtggggttccaccaaggtcgagcacggccatcctacagatcaccgtgactgatgttaat gacaatcgcccagtttttaaggagagtgaaattgatgtccacatccctgagaatgctcct gtgggcacctctgtgatccagctccacgccactgatgctgaccttggccccaacgctgtt gtccgcttcttcttcagcaaccaggtgtctgttttggccaggaggcttttcaccattgac agtgccacgggcctgatcacagtaaggcagcccctggacagggaagagttcccagttcac aagctgactgtcctggccagtgatggcagctcaaccccatccagggcagtggttactatt aacatcacggacgttaatgataacgtgccaaccatcgataccaggtacattattaaccct gtcaacggtacggtcttgctgtcagaaaatgcaccactcaatacaaaagtcgcactgatc acagtcacagaccaagactcggatttaaatgggaaattaacctgcttcactgaccacgat gtcccatttcgtttgaagcctgtatttgataaccagttcttattagaaactgcagccctg ctggactatgagagcacaagagaatacactattaagatagtggcatctgatgccggcaag ccaccgttaaatcaatcagccactgtggtgattaaactgaaggacgagaatgataacgct cctgtttttaatcagccggtaattgggctgtcaatccctgaaaataacacccccggtaca cagttaacaaaaatcagtgccactgatgcggacagtgggaagaatgcagagatcacttac ctcctgggtcccaatgccccatccatcttcagtgtggatcggcgaactggcatcctgtca gctatgagaagattagacagggagaagcaggaccgctatgtgtttacggtgctggccagg gacggaggcaggccctctatacagagcaatgctactgtgattgtgactgtgttagatcaa aatgacaacagtccttccttcacacacagtgaatacaatttctatgtgcctgaaaacctg cctatgtatggaacagttggacttatcacagttaccgatgcagacgcaggaggtaatgca gctgttagtctttccatcctgaatgataaaggctactttataattgatcctaccagtggg gttatcaaacccaatattacatttgatagggagcagcaaagttcttacacatttcaagtc aaagctgctgatggaggtaggcctcaacgaacttcagtggccagagtgaccataaatgtt gttgatgtaaatgataacagccctgtgtttgtatatccaccctctaacttttcgtatgaa ctggtatcgacttctgctaatcctggctctgtagtgggcaaagtttttgctatagacaat gatacagggatgaatgcagaacttcgctacagtatagtcagtgggaattccagagggctc tttgccatcgatccaatgactggcaatattactttgcaagaaaaagtgacaacagcagac catggtttgtacaggctggtagtgaaagttattgatttggggcagccagaatccttgcat gccatggcacttgtgcatctgtttgtgaatgaaaccgtcaataattttacatttgtccaa gacctggtgcgaaagagcatggagacacctttggataagaatgttgggggcagtcagatg acccctcagaccaatgattacattaagattgttatcgccatcatagctgggaccatgacc gtcattcttgttatttttgttactgctttggttcgatgccgccacacgccaagacacaaa gctgtgcaaaaggggaaacagagtggggagtgggtttcacccaatcaggaaaacaggcag actaagaaaaagaagcgaaagaagaagaggtctccaaagaacctccttctgaattttgtt acaattgaggagtccaaaccagatgacccagcccatgagcacatcaatggtaccttagat cttccggtggaattggaggatcagactatggggaagtataactgggccacaacacctacc actttcaaacctgatagtccagatcttggaaaacactataagtcggcctcgccccagccc tcctttcaaatcaaacctgagactccagtgccagtgaagaaacaccacgtcatccaagag ttaccgatggataacacgtttgtggttggctgcgactccctgtccaagtgttcttcgagc agttctgacccttacagcgtttcagagtgcagttgtcagggtggcttcaagactgcaggg ccaatccacaccagacagtcacaacgaagggtcacattccacctccctgatggttctcag gaaagctgcagcgacagtgggttgggagaccatgaacccaacagcagtgccagcacttca caccctctgcctctcggcttcccgcaagaagagtactacgagcaaacatcccctaacagc aggactgaaggtgatggcaactcagaccctgagtccagtgtcgaggtgtctcttcagaaa gtactgggtgaagcctcggagacttgcacacaggagtgccttgtcctcggtcactccgac aactgttggatgcccccgtcgctgacccagtaccagcaacctaaccctccactgccgtcc atcggatttcagcagggctgggctagaggcggcaggtcagaaggccagcacgccatcggg agggcaggcagcaaggacgacattgacaaaagccaaggcaatggtaggcaacagctgtac aatggttcggagagacactgtaccaccgaggaccctgtgaaggtcattcctctagcgaac tttacgccaggacaacagggctcagtgtctcgcgccaactctccctatgttcatgagcac cagctttag

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