Leucoraja erinaceus (little skate): 129702239
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Entry
129702239 CDS
T09122
Symbol
pcdh19
Name
(RefSeq) protocadherin-19 isoform X1
KO
K16499
protocadherin delta 2
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
leri04515
]
129702239 (pcdh19)
Cell adhesion molecules [BR:
leri04515
]
Cadherins
Protocadherins
129702239 (pcdh19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
129702239
NCBI-ProteinID:
XP_055499875
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All DBs
Position
12:complement(33898116..34056449)
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AA seq
1105 aa
AA seq
DB search
MNPEINRYCSGMGLMLLIVLLFWSRAAAVINLKYSVVEEERAGTVIGNIAKDAGFSTWEQ
PVPLFRVLSNSAPHLLEINPVSGLLVTKQKIDRDLLCGQNSKCVISLEEMVNSMEICVVK
VEILDINDNSPSFPTEQIDLEISETASPGTRVPLESAYDPDSGDFGVQTYQITPNELFGL
EIKSRGDGSRFAELVVEKALDREVQSHYSYMITALDGGKPPNLGTTQLNVKVIDSNDNYP
VFEQTTYTVNVLENAPVNSLVIDLNASDPDEGTNGEIIYSFNSYVPDKTRQLFKLEPRTG
AITVKGNIDYEEGSIYEIDVQAKDLGPNSIPAHCKVTVNVVDVNDNVPLITLFSVNSETV
EVSEVAPPGYVIGLVRVSDRDSGANGRVQCELLGAVPFKLQEYESFYTILVDGRLDREQR
DFYNLTILAKDGGSPSLQSTKSFTVRITDENDNPPHFTKPFYQVSVRENNTPGSHLLSVS
ARDIDLGLNGSVSYQIVPSQVRDMPVFTYVSINPTSGDVYALRSFNYEQTRSFEFKVMAK
DGGTPALESNSTVKVFVLDVNDNVPIITAPPLVNGTTDVYIPRNVGSGYLVTVVKADDYD
EGDNGRLTYGIVDGDRGFFEMDQTSGEIRTTRSFGDGAETSYELIVVAHDHGKSALSATA
LVAVYLSPGLDAQESTGSLNLSLIFIIALGSIAAILFVTMIFVAVKCKRDNKEIRTYNCR
VAEYSYGQQKKPKKKNKINKNDIRLVPRDMEETDKMNVVSCSSLTSSLNYFDYHQQTLPM
GCRRSEATFLNVENQNSRNASGNHVYHTFTNTQSSQQQPDLIINGMPLPESENYSIESSY
VNSRQHLIKSSSTFKDLERNSLKDSGHEESDQTDSEHDAHRGLCCDTAINEVLNTTLNST
GSQVPEQDQNEGFTCMEECRILGHSDRCWMPRVAGSSRAKSPDHGRNVIALSIEATNVDS
EPYENGCSKRTFATFGKDPRDRTVENDKTDLKGKRTFDLPVCSPKLNGSVSSSQETSNGI
DISSPASTPVHLSSPSSNRPPATYSAMHCPAAHNLNQPASQASSHPSESGSQEADSDHVR
DINHLVHDCQETSLAGVKRIQDIVL
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atgaatccagaaatcaacaggtactgctcgggcatgggtttgatgttgctgattgtgctg
ctcttctggtctcgggccgctgccgtgattaatttgaaatactcggtagtggaagaggag
agagccgggacagtgatcggaaacatagcgaaagatgctggcttctcaacttgggagcag
ccggtgcctctcttccgcgtcctgtccaactcggcgccgcatctactagagatcaacccg
gtcagtgggctgctggtaaccaagcagaagatcgaccgagacctgttgtgcggtcagaac
agcaaatgcgtgatctcgctggaggagatggtcaactccatggagatctgtgtggtcaag
gtggagattctggacatcaacgacaactcgcccagcttccccaccgagcagatcgacctg
gagatctcggagacggccagcccgggcaccagggtccccctggagagcgcctacgaccct
gactcgggggatttcggagtgcagacctaccagataacgcccaacgaactgttcgggctg
gaaatcaagagccggggggacggctctcgctttgccgagctggtggtggagaaagccctg
gacagggaggtccagtctcactacagctacatgatcacggccctggacgggggcaaacca
cctaacctgggcacgacccaactcaacgttaaagtcatcgactccaacgacaactacccg
gtgtttgaacaaaccacttacacggtcaatgtgctggagaacgcaccggtcaactcgctg
gtcatcgacttgaacgcctcggatccggacgaggggacaaacggcgagatcatctattcc
ttcaacagttacgtgccggacaagaccaggcaactcttcaaactggagccccggaccggg
gccatcacggtgaagggcaacatcgactacgaggaggggagcatttacgagatcgacgtg
caggcgaaggacctgggacccaactccatcccggcccactgcaaggtgacggtgaacgta
gtggacgtgaacgacaatgtgccgctcatcactctgttctcggtcaacagtgagacggtg
gaggtgagcgaggtcgctcctcccggctacgtgatcggcctggtgcgagtttccgaccgg
gactccggcgccaatggcagagtccagtgcgaactgttgggagccgtcccgttcaaactg
caggagtacgagagcttctacaccatcctggtggatgggaggttggaccgggagcagaga
gacttctacaacctgaccatactggccaaggacggcggctccccctcgctccagtccacc
aagtccttcaccgtccgcatcacggacgagaacgacaaccctcctcacttcaccaagcct
ttctaccaggtcagcgtgcgggagaacaacactcccggctcgcaccttctctccgtgtcc
gccagggacatcgatttggggctgaacggcagcgtctcctaccagatagtgccgtcgcag
gtgagggacatgcccgtcttcacctacgtgtccatcaaccccacatcgggggacgtgtac
gcactcaggtccttcaactacgagcagacccggtcgttcgagtttaaggtcatggccaaa
gatgggggtacgcccgccctggagagcaacagcacggtgaaggtgtttgtcctggacgtc
aatgacaatgtgcccattatcacggcgccgcctttggtcaatggcaccacggatgtctat
atccccaggaacgtcggctctggctacttggtgacagtggtcaaagctgacgactacgac
gaaggcgacaacggccgcttgacctacggcatcgtggatggcgaccgcggtttcttcgag
atggatcaaacgagtggggaaatcaggaccaccagaagtttcggagacggggccgagacc
agctatgaactgatcgtggtggcgcacgaccacggcaagtctgccctctccgccactgcc
ttggtcgccgtctatctctcccctggcttagatgcccaggagtcgacagggtccctgaac
ttatctttaatcttcatcatcgccttggggtccatcgctgcaatccttttcgtgaccatg
atctttgtagcagtcaagtgcaagcgagacaataaggagatcaggacgtacaactgtagg
gtggcggagtattcttatggacagcagaagaaaccgaagaaaaagaataagatcaacaag
aatgacatcaggctggtgcccagagacatggaggagactgataaaatgaacgtggtcagc
tgctcttccctcacctcctccctgaactacttcgactaccaccagcaaactctgcccatg
ggttgtcgcaggtcagaggctacctttctaaatgtggagaaccagaactcgaggaacgcc
agtggaaaccacgtgtatcacactttcactaacacccagagctcccaacaacagccagac
ctcatcatcaacgggatgccccttccagagtcagaaaattactccatcgagtcaagctac
gtaaacagcagacaacatcttattaaaagtagttccacattcaaggacctggagaggaac
agtctcaaggacagcggacatgaggagagtgaccagactgacagcgaacacgatgcacac
aggggtctgtgctgtgacacggctatcaatgaagtattgaatacaactctcaattctacc
ggttcccaggttcctgaacaagatcagaatgaaggtttcacctgcatggaagaatgccgg
atcttaggccactcagacagatgttggatgccaagagttgcaggatcaagccgtgccaag
tctcctgaccatggcagaaatgttattgcattgtccatagaggccaccaacgtggactct
gaaccctatgagaatggctgttcaaagagaacttttgcaacttttggaaaagaccccaga
gatcgtacagtcgagaatgataaaacagatttgaaaggaaagaggacatttgatctacct
gtctgtagcccaaaactgaatggctcagtctccagcagtcaggaaacaagcaacggtatt
gacatttcaagtcctgccagcacacccgtgcatttaagcagcccctcttctaataggcct
ccagccacatattctgcgatgcactgcccagcagcacacaacctcaaccaacctgccagt
caggcctcctcacatccatctgagtcaggatcgcaggaagccgactctgaccatgtccga
gacatcaaccatcttgtgcacgattgccaagagacgagcttggcgggagttaaacgaata
caagacattgtgctgtga
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