Leucoraja erinaceus (little skate): 129702283
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Entry
129702283 CDS
T09122
Symbol
fmr1
Name
(RefSeq) synaptic functional regulator FMR1 isoform X1
KO
K15516
fragile X mental retardation protein
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
leri03019
]
129702283 (fmr1)
Messenger RNA biogenesis [BR:
leri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
129702283 (fmr1)
Factors involved in mRNA localization
Other mRNA localization factors
129702283 (fmr1)
mRNA cycle factors
Stress granule specific factors
129702283 (fmr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
KH_9
Tudor_FRX1
KH_1
FXMR_C2
Agenet
KH-I_KHDC4-BBP
KH_2
Motif
Other DBs
NCBI-GeneID:
129702283
NCBI-ProteinID:
XP_055499967
LinkDB
All DBs
Position
12:41427122..41486479
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AA seq
584 aa
AA seq
DB search
MEDLMVEVRGSNGAFYKAFVKDVHEEALTVAFENNWQPERQIPFHDVRFPPPADYHKDIN
EGDDVEVYSRANEKEPCGWWLAKVRMMKGEFYVIEYAVCDATFNEIVTVERLRPINPNKP
ATKSTFHKIKLDVPDDLRRACANESAHKDFKKAIGAYCVYFDSESNQLVVLSTNEMTAKR
ASMLSDMHFRSIRTKLTLMLRNEEASKQLESSRQLASRFHEQFIVREDLMGLAIGTHGAN
IQQARKVSGVTAIELDEETCTFHIYGEDQEAVKQARNYLEFTEDSVQVPRNLVGKVIGKN
GKLIQEIVDKSGVVRVRIEGDGDKKIPREEGMVPFVFVGTKESISNARVLLDYHLNYLKE
VDQLRMERLQIDEQLRQMGAGLRTPANRPDKERGYSTDESTSYLRGGRPYGSRGRGRRGP
GYASGNNSEASNASETESEHRDELSDWSLAPTDEEREPYSRRGDNRRRGNAGRGRGGGRG
RGSNKNLSATSDEFLRADIRKRNSSRDSKTGTTDSSLEVGKPQYGESQIRTDSNNERSVI
TKASHSPNVFGESTRQRIGKERTPKKEKSETSADNQQVMVNGVS
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggaggatctgatggtggaggtgcgcggctcgaacggagccttctacaaggcatttgtg
aaggatgtgcatgaagaagctttgactgtggctttcgagaacaactggcaacctgaaaga
caaatccctttccacgatgtacgatttccaccaccagcagactatcacaaagatattaac
gaaggtgatgatgttgaggtttattctcgagctaatgaaaaggaaccttgcggctggtgg
ttggcaaaagttagaatgatgaagggtgaattttatgttatagagtatgctgtttgtgat
gcaacattcaatgaaattgtcacagttgaaagactaagacccatcaaccctaataaacct
gcgacaaaaagcacgtttcacaaaataaaacttgatgttcctgatgacctgagacgagca
tgtgccaatgaatctgcacacaaggattttaaaaaggccattggtgcttattgcgtgtac
tttgattcggaaagcaatcaactagttgtgttgtccacaaatgaaatgacagcaaagcga
gcaagcatgctgagtgacatgcatttcagaagcattcggacaaagttgactctgatgttg
aggaatgaggaggcgagcaagcaactggagagttcacggcagcttgcctcgcgcttccat
gagcagttcatagtacgagaagacctcatgggccttgcaatcggtacgcatggagccaac
attcaacaggcaaggaaagtgtcaggtgttactgctattgagctggatgaagagacttgc
actttccacatctacggtgaggaccaagaagcagtcaagcaggccaggaattatctcgaa
tttacagaagactctgtacaagtaccgaggaaccttgtaggaaaggtaataggcaaaaat
ggaaagctcatacaagaaattgtcgacaaatctggagttgtccgagtgagaattgaagga
gatggcgataagaagattccacgggaagagggcatggttccttttgtcttcgttggaaca
aaggaaagcattagcaatgctcgcgttctattagactatcatctaaactacttaaaggag
gttgaccagctccggatggaacgtttacaaatagatgagcagcttcggcagatgggtgcc
ggtttgaggactccggcaaatcgccccgataaagaaaggggctactcaaccgacgagagc
acaagttacttgcgcgggggaagaccttatggtagtcgaggtcgcggtaggcgaggccca
ggctatgcatcaggaaacaactctgaagcatctaatgcctctgagactgaatccgagcac
agagatgagctaagtgattggtcgctggcgcctacagatgaggagagggaaccatattct
cgccggggtgacaatcgcaggcgtggcaatgccgggcgtggtcgcggtggaggccgcggc
cgtgggagtaacaaaaacctgtcggcaacttcagatgaattcttgagggcagacatccgt
aaacgcaattcatcaagagactcgaagactgggacgacggacagctcattggaggttggg
aagccacaatatggggaatcacagatcagaactgacagcaataatgaaaggagtgtcata
acgaaagcttcacacagcccaaacgtttttggtgagagcactcgacaacgcataggcaag
gagcgcactccaaagaaggagaagtcggaaacttccgcagacaaccagcaagtgatggtg
aacggcgtctcttaa
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