Leucoraja erinaceus (little skate): 129702335
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Entry
129702335 CDS
T09122
Symbol
gpc4
Name
(RefSeq) glypican-4
KO
K08110
glypican 4
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
129702335 (gpc4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
leri00535
]
129702335 (gpc4)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
leri00537
]
129702335 (gpc4)
Proteoglycans [BR:
leri00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
129702335 (gpc4)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
leri00537
]
Others
129702335 (gpc4)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Glypican
Fz
T6SS_FHA_C
Motif
Other DBs
NCBI-GeneID:
129702335
NCBI-ProteinID:
XP_055500063
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Position
12:complement(47244556..47315752)
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AA seq
553 aa
AA seq
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MFSLCALALALLCQPARPDLQPRNCSELAKLLSPRKHDGPRPSRDLAAGDHLKVCPQLHT
CCTSEMEEKLSQQSQQEFSKEVLETSNALHSTFASRYKKFDEFFKELVNNAEKSLNDMFV
HTYGMVYKKNADVFQDLFKELKKYYMAGNLNLEDMLNDFWARLLERMFRLINPQYHFTEE
YLDCISKYTEQLKPFGDVPRKLKLQVTRAFIAARTFAQGLRVAREVVGKVSTVNPTTECA
DALLKMTYCPHCRGIFAFKPCNNYCLNVMKGCLANLADLDIEWNNFIDAMLMVAERLEGP
FNIESVMDPIDVKISEAIMTMQENSMQISQKVFQGCGKPKSLSGSRLTRSISDGFNPRFR
PYSPEERPTTAAGTSLDRLVTDVKEKLKNAKKFWSTLPYNMCSNSSSAAELEEDGCWNGS
NSSRYNFAVTGNGLANQLNNPAVQVDITKPDMVIRRQIMVLQIMTNKIKNAYHGNDVTFH
DASDEGSGGESGSGCIGLDCHLEFTFTITDSPLLLAPLEPKIIKPNNSACRSNLSQLILL
VSCLIIALHLSLR
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgttctcgctctgcgccttggccctcgctctgctctgccagcccgctcggcccgacctc
cagcctcgcaactgctccgagttggccaaacttctcagcccccgaaagcacgatggcccc
aggccctcaagggaccttgcggcgggagatcacttgaaggtgtgtcctcaactccacaca
tgctgtacctctgaaatggaagagaagctcagccaacaaagccagcaagagttcagcaaa
gaagtgttggagacgagcaatgcgctgcactcaacctttgcttccagatataagaaattt
gatgaatttttcaaggaattagtaaataatgctgaaaaatccttaaatgatatgtttgta
catacttacggcatggtttataagaaaaacgcagacgtgttccaggacttatttaaagag
ttgaagaaatactacatggctggaaatctaaacttggaagacatgttgaatgacttctgg
gctcgtcttctggagcggatgtttcggttgataaaccctcaataccatttcacggaagag
tatctggattgcattagcaaatatacagagcagctgaagccatttggagacgtgccacgc
aagctgaaactccaagtgacaagggcatttattgctgctcgaacatttgcacaaggcctt
agagttgcaagagaggttgtgggcaaagtatccacagtcaatccaacaacggagtgtgct
gatgcactgctgaagatgacgtattgtcctcactgtcgtgggatatttgcatttaaaccg
tgcaacaactactgtctcaatgtcatgaagggatgcttggccaatctggcagatctggac
atagaatggaacaactttattgatgcaatgctgatggttgcagagagattggagggacca
ttcaacattgaatcagttatggatcccattgatgttaagatttctgaggcaattatgacc
atgcaggagaacagtatgcagatctctcaaaaggtatttcagggctgtgggaagccaaag
tctctatctgggagccgtttaactcgatctatatcggatgggtttaatccaaggtttaga
ccctatagtcctgaggagcgtccaacaacagcagctggcacaagccttgacagactggtg
acagatgttaaagaaaaacttaagaatgcaaagaagttctggtcaactctcccatacaac
atgtgcagcaacagcagctcagccgctgagcttgaggaggatggatgttggaatggaagt
aacagtagcaggtacaattttgcagtgacgggcaatggccttgcaaaccagctcaacaac
ccagctgttcaagtggatattaccaaaccagacatggtgattcgtaggcagataatggtg
ctgcaaataatgaccaataaaataaagaatgcttatcatggaaacgatgtaacatttcat
gatgcaagtgatgaaggcagcggtggagaaagtggcagtggctgtattggacttgactgc
cacctggagttcacgttcaccatcactgattctcctctgctccttgctcccttggagccc
aagataattaaacctaataactctgcttgccgtagcaatctctcacagctaattctactc
gttagctgccttattatagccttacatctgagcttaagataa
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