Leucoraja erinaceus (little skate): 129702364
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Entry
129702364 CDS
T09122
Symbol
rlim
Name
(RefSeq) E3 ubiquitin-protein ligase RNF12-B
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
leri04121
]
129702364 (rlim)
Enzymes [BR:
leri01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129702364 (rlim)
Ubiquitin system [BR:
leri04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129702364 (rlim)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-ANAPC11
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-RING-like
Prok-RING_4
zf-RING_4
zf-HC5HC2H_2
zf-HC5HC2H
Motif
Other DBs
NCBI-GeneID:
129702364
NCBI-ProteinID:
XP_055500106
LinkDB
All DBs
Position
12:complement(50963106..51014138)
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AA seq
660 aa
AA seq
DB search
MENAANEDSGRNEQADTHSTNEDQRRHQSDRLDREEAFYHFVNNLSEEEYRLMRDNNLFG
TPGEITEEELTRRLQQVKNGTIPNNPDARRSEGSGDNRGGEGLDEGSSGDSLLEWLNAFR
QTGNTTRSGQSGNRSWRAVSRTNPTSGDFRFSLEINVSRGRIDQSAEMESEQMDTSNAAT
TLPPTEEAVTPVPSRSINPSPPATAQPAQAVTAPPITITEESVQSEPERSESGVTRQSRR
PNGELSYENSYELFRQDLETQPPQSRARSGRSRSPERRRSSRTRSNRSRSPLHPVEGMSR
SRRQSSLRSERSSSESGTEGSSRTRQHIVSRQNRVGDEVRAEVTNPFSTSESSEPREPSQ
EAADPAEATVNDSSVAGRRPPTIMLDLQVRRVRPGENTDRDSIANRTRSRSQTTDNTVVY
ESERGGLRRTFSRSERAGVRTYVSTIRIPFRRISDSGLGEAASVALQTILRRIMMGGELS
SFVDSDSDSETSNRGQNPVQEVSESQNNTSESPNVASTGRTGEQRAAAQRNSGETDSTTG
ARRREGQQTRGLFGLEESGTLPILRLAHFFLLNDEDEDDQPRGLTKEQIDNLSTRNFGES
DAIKTCSVCISEYTAGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRQAVLGRTAGDNVG
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatgctgctaatgaagatagtggaagaaatgagcaggctgacactcattcgact
aatgaagatcagcgcaggcatcagtcggaccgcctagatcgggaggaagccttctatcat
tttgtcaataacctgagtgaagaggaatacaggctgatgagggataataacctgtttggt
acaccaggggaaattacagaagaagaacttaccaggcgcctgcagcaagtaaaaaacggc
acaattccgaacaaccctgatgctcgaaggagcgaaggctctggtgacaatcgaggtggc
gaaggtttggacgaaggatcaagtggtgattctcttctggagtggttgaatgctttcaga
cagacgggaaacacaacgagaagcgggcaaagtgggaatcgctcatggagagctgtcagt
cgtacaaacccaacaagtggagattttcgattcagcttggaaattaacgtaagtcgtggt
agaattgatcaaagtgccgaaatggaaagtgaacaaatggacacttcgaatgcagcaaca
acgttgccaccgacagaagaggcagtgacgcctgtaccatcaagaagcataaacccgtcc
ccacctgcaacagcacaacctgcgcaagcagtaacagctccaccaataaccattacagaa
gaaagtgtccaaagtgaacctgaaaggtctgaatctggtgttactagacagagcagaaga
ccaaatggggaactgtcttatgaaaacagctatgaacttttccgacaggaccttgaaacc
cagccaccgcaaagtcgtgcaaggagtggtagaagcagaagccccgaacgccgacggtca
tctagaacaagaagcaatcgaagtcgctcgcccttgcatccagttgaaggaatgagtcga
tcacggcgccagagttctctccgatctgagagatccagttcagaaagtgggacagaagga
agttccagaactagacagcatatagtgtccaggcagaatcgggttggagatgaagtgcgg
gcggaagtaaccaaccccttttctacatctgagtcgagtgaacctcgagagccttcccaa
gaagctgctgatcctgcagaagcgaccgtcaatgattcgtctgtagctggccggcgacca
ccaaccattatgctagacttgcaggtgagaagggtgagacctggtgaaaatacggataga
gatagtatagccaacaggacccgctcgagatcccaaacaacagacaacacagttgtgtat
gaaagtgagcggggtgggctcaggcgcacattttcccgctctgagcgagcaggggtgaga
acttacgttagtaccattcggattccatttcgcaggatttctgattcgggtcttggggag
gctgcctcagttgctctccaaaccatacttcgccgaataatgatgggtggggaattgagt
tcctttgtggacagtgacagtgattctgaaacgagcaacaggggccaaaatccagtgcaa
gaagtctctgagtcgcagaacaacacaagtgaatcacccaacgtggcttccacgggcaga
acaggagagcagagggcggcagcacagcggaatagcggcgagacagatagcaccactggt
gcaaggagaagagaaggtcagcagactcgaggcctgtttggccttgaagaaagtggtact
ttgcccatacttaggctcgcccatttcttcttgctaaatgacgaagatgaggatgatcag
cccaggggactgaccaaagagcaaattgacaacttgtccacaagaaattttggggaaagt
gatgcaattaaaacctgtagcgtgtgcattagtgagtacactgctggaaacaagctgcgc
aagcttccctgctcacacgaatatcatgttcactgtattgatcgctggctctctgaaaac
tccacatgccccatatgtcgtcaggccgttttaggtcgcactgctggagataatgttggc
tag
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integrated database retrieval system
