Leucoraja erinaceus (little skate): 129702381
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Entry
129702381 CDS
T09122
Symbol
brwd3
Name
(RefSeq) bromodomain and WD repeat-containing protein 3 isoform X1
KO
K11798
bromodomain and WD repeat domain containing protein 1/3
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
leri04121
]
129702381 (brwd3)
Ubiquitin system [BR:
leri04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
129702381 (brwd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Bromodomain
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_EML_2
Beta-prop_EML
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_EIPR1
Beta-prop_HPS5
Beta-prop_SPT8
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_DCAF12
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
129702381
NCBI-ProteinID:
XP_055500126
LinkDB
All DBs
Position
12:54104174..54226452
Genome browser
AA seq
1869 aa
AA seq
DB search
MSDCSRVSQLECELYYLIARFLLAGPCQKSARVLIQELEEYQLVPRRLDWEGKEHRMSFE
SLVLANKHVSSDHLLQICQRIGPLLDKEIPPSVPGVQTLLGVGRQSLLRTIKDCKHVVWK
GSAFAALHRGRPPEPPVSYGKCPNAVNIVTSKQLTGCGRHSHVFPVVAYQHVKMYKRILG
HLSSVYCIAFDRSGRRIFTGSDDCLVKIWATDDGRLLSTLRGHSAEISDMAVNYENTLIA
AGSCDKVIRVWCLRTCAPIAVLQGHTGSITSLLFCPGTRGTTRYLTSTGADGTICFWQWN
METIKFNELPVKFTDRSRPASQISCSSFSSGGMFIATGSTDHVIRVYYLGSGSPERISEL
ASHTDKVVAIQFCNNGHSLRFLSGSRDGTARIWQYQHQEWKSIVLDMFTKLPGSNSISME
DKISKLKVTMVAWDRCDSTVITAVNNFHLKVWNSYTGQLLHVLSGHDDEVFVLEAHPFDS
RIMLSAGHDGNIFIWDLSKGTKLRNFFNMIEGQGHGAVFDCKFSADGHHFACTDSHGHVL
IFGFGCIKPYEKIPDQMFYHTDYRPLIRDSNNYVLDEQTQQAPHLMPPPFLVDVDGNPHP
THYQRLVPGRENCMDEQLVPQLGYMANGNGEVVEQVISQQTDDQYENNQETSVLDDAIRE
LQREHEMRQRSEGISIPDDPYSRSNSLNSALLSSPNLGLRRSGQIEGVRQMHNNAPRSQI
ATEGDLMAWSRRVVVTELSPGIRIFQEELRLCKGDGEINLYTTEKKRKPLQPTQKSDGQD
YFPHSGRRIQRRNQHFYQTRSTVERRTRSIHRMEDPNNSSEQEMETVDGSDGSSEEVEEE
WQSESTSSDSSSEYSDWTADAGINLQPPKRLVRRKVRHNRSSSDDEKMGERLAVKRKKSK
QSKQKRPGELALDGVPVEEWIPPAWISDTVPRRSPFVPQMGEEAVYFRQGHEAYVKAVKK
AKIYNVNLQKQPWIKLELREQEIVKVIGIKYEVGPPTLCCLKLSLLDPITGKMTGESFSI
KYHDMPDVIDFLVLRQFYDDAKKRNWKVGDRFRSIIDDAWWFGSVVNQHPFQPEYPDSLF
QCYNVCWDNNELEKMSPWDMEQIPENATYPEEIGASVPVTPEELKDLLYKPQEGDWGSCF
ANEECERIIRGIDQLLALEIAAPFSAPVDLNAYPLYCTVVAYPTDLNTIRRKLENRFYRT
ISSLMWEVRYVEHNAGTFNELGSPIVKSAKLISDVLLKFIRDQNCTNILEQYEKTKIEEL
SDDENDKASELDSDAPGTSSDTIFWLPSQLNRRPALSVDVHTWKEQCKEFLDLMFQREDS
EPFRQPVDLFAYPDYRDIIDTPMDFNMVKETLEAENYESPVEFCKDVRLIFSNAKAYTPN
KKSRIYNMTLKLSALVETQIKNIISNYKLALKCQKKIKPRQKYRKRFKSSSSSQSSSKSS
SRSGSRSTSQSSSRSSSQSRSSSRSKGRSSSRSRSRNSSRSRSRNSSRSRSRNSSRSRSR
NSSRSRSRNSSRSRSRSGSRSRSRSGSRSKGRSSSRSRSRSGSRSRSRSGSRSRSRSSSR
SKGRSSSRSRSGSQSRSRSGSRSSSRASSHKHRAANSPNTILTSSPPYFVRTISSRSSPA
SETDELSGRLNIELKHPHVLPLPEWDAQDRIQSDSESENTSIIKNTLAPVKQDQLSSGPL
VNGHEMRTSTKRKLMSDSEESDLDDTNQGEMEDTAQLDNDASAKSGSGSECGPESVSGVD
KDHVEGDHDYSKVVRRKTTGKGNIKNRVGVRRKRRRRKGFKFTTPTNKYKRARLLDDWFD
EDELCIDRLNKCSTIRTRNQGRRTVLYNDDSDDGFVATDEPLNLGTSRSGRMRRMTEKAK
ASHLMGWSH
NT seq
5610 nt
NT seq
+upstream
nt +downstream
nt
atgtccgactgcagccgagtatcgcagctcgagtgcgagctctactacttgatcgcccgc
ttcctcctcgctggaccctgtcagaaatcggcgcgggtcctgatccaggagttggaggaa
tatcagctggtccctcggcgtctggactgggaagggaaggagcatcggatgagctttgag
agcctggtattagccaacaaacatgtatcttcagatcacttgctgcaaatctgtcaacgg
attggccccctgttggataaggaaatcccacccagtgttcctggagtgcaaaccttactg
ggagttgggcgacagtcattgttacggactataaaagattgcaaacatgtagtgtggaaa
ggttcggccttcgctgctcttcatcgtggaagaccaccagaacctcctgtgagctacgga
aaatgtccaaatgctgtgaatattgtcacttcaaaacaactgacgggatgtggaagacat
agccatgtttttcctgttgtggcttaccagcatgtgaaaatgtacaagaggatacttggg
catctttcctctgtatactgcattgcatttgatcgttcagggaggagaattttcacgggt
tcagatgattgcttggtaaagatttgggccactgatgatggacgacttctgtctacttta
cgtgggcactcagctgaaatttctgatatggctgttaactatgagaacacattgattgct
gccggcagctgtgataaagtgatacgtgtttggtgcttaaggacatgtgctcctattgca
gtactgcaaggacatactggatctataacatctttattgttttgccctggcaccagagga
acaacacgatacttgacgtctacaggtgcagatgggaccatatgcttttggcaatggaat
atggagactataaaatttaatgaacttccagtgaaatttacagatagatccaggccagca
agtcaaatctcctgctcttctttcagttctggggggatgtttatagcaactggaagtaca
gatcatgtgattagggtttactacttgggttccggttcgccagaaaggatttccgagctg
gcatcacatacggataaagttgtcgcaattcaattctgcaacaatggtcacagcttaaga
tttcttagtggcagccgagatggaacagctagaatctggcaatatcaacaccaagagtgg
aagagtatagttttggacatgtttacaaaattaccggggagcaattcaatttccatggaa
gacaaaatcagtaagttgaaagtgaccatggtagcctgggatcgctgtgacagcacagta
atcacagcagtgaacaattttcatttgaaagtgtggaactcctacactggccagctgctt
catgttctctcgggtcatgatgatgaagtttttgtgctagaagctcatccatttgattcc
aggataatgttatctgcagggcatgatggcaacattttcatctgggacctatcaaaagga
accaaactccggaacttttttaacatgattgaaggtcagggtcatggtgctgtgtttgat
tgtaaattctctgcagatggacatcattttgcatgcactgactctcatggacatgtactg
atctttggatttggctgcattaaaccatatgaaaagattccagaccaaatgttttatcac
actgattaccgtcctcttatccgtgattccaataattacgtcctggatgagcagacacag
caggcacctcatctcatgcctcccccatttctggttgatgtggatggaaacccccaccca
acacactatcaacggctggtgcctggtcgagagaactgcatggatgaacagcttgttcca
cagttgggctatatggcaaatggtaatggagaagttgtggaacaagtcatcagccaacag
acagatgatcagtatgagaataaccaggaaaccagtgttctggatgatgctattagagaa
ctccagcgagaacatgaaatgaggcagagaagtgaaggaatatctataccagatgatcct
tacagtagatcaaattcgctaaacagtgccttgctgtcttcaccgaatctcggacttcga
aggagtggtcaaattgaaggtgtccgacaaatgcacaataatgccccgaggagtcaaatt
gctacagagggagacctgatggcatggagcaggagggttgtagttacggagctttcacct
ggaataagaatatttcaggaggaattgcgtctttgcaaaggagatggagaaatcaatctg
tacacaactgagaaaaaacgtaaaccattacaaccaacacagaagagcgatggccaggat
tattttccacattcaggaaggcgaattcaacggcgaaatcaacatttttatcaaacccgt
tcaactgtcgaacgtcgtactcgcagtattcatcgcatggaagatccaaataattcttcg
gagcaggaaatggagactgttgatggaagtgatggatcatctgaagaggttgaagaagag
tggcagagtgaaagcacttccagcgattcttcaagtgagtattcagattggacagcagat
gcaggcattaacttgcaacctcccaagcgactggtgagacgaaaagtaaggcacaacagg
agcagctctgacgatgaaaagatgggtgaaagattggctgtaaaacgtaaaaaatccaaa
cagtccaagcaaaagaggccaggtgaacttgcattggatggtgtgcctgttgaagaatgg
attcctcctgcttggatcagcgataccgttccacgcagatcgccatttgtgccccaaatg
ggcgaagaggctgtatattttcgtcaaggacatgaagcatatgtgaaagctgttaaaaaa
gcaaaaatatacaatgtaaaccttcagaagcaaccatggatcaaattagaactcagggaa
caagagatcgtgaaggtcattgggatcaagtatgaagttggaccgcctacattatgctgt
ctgaagctttctctgttagatcccattactggcaaaatgactggagaatccttctctatt
aaataccatgatatgccagatgtcattgactttttagttttgaggcaattttacgatgac
gctaaaaagagaaactggaaagttggagaccgctttcgcagtataatagacgatgcctgg
tggtttgggtctgtggtgaatcagcatccttttcagcccgagtatcctgacagtttgttt
cagtgttataatgtctgctgggataataatgagttggagaagatgagcccctgggacatg
gaacaaataccggaaaatgctacctaccctgaagaaattggtgctagtgttccagtcaca
ccggaagagcttaaagacttgttatataaaccccaagaaggtgattggggatcctgcttt
gcaaatgaagaatgtgaacgtatcattcggggaattgatcaactgctagcacttgaaata
gcagcaccattttctgctccagtggatctcaatgcctacccattgtattgcactgtggtt
gcatatccaacagacctgaacaccatcaggaggaaattagaaaacagattttataggacg
atttctagcctaatgtgggaagtaaggtacgttgaacataatgctggaaccttcaatgag
cttggcagtccaattgttaagtcggcaaagttaatcagcgatgtgttactgaaatttatt
agggaccagaactgcaccaatattttagagcagtatgaaaaaactaagatagaggaactc
agtgatgatgaaaatgacaaggcttcagaattggattcagatgctcctgggacctcctca
gacacaatattttggctcccaagccaactgaatagaagaccagcgttaagcgttgacgtg
catacttggaaggaacagtgcaaggagtttctggatcttatgtttcagcgcgaagattct
gaacctttcaggcagccagtagatctcttcgcttatcctgactacagggatatcatagac
accccaatggacttcaacatggtgaaagaaacacttgaagcggaaaattatgaatcacct
gtggagttttgcaaggatgttcgattaatattcagcaatgccaaagcttacacacctaac
aagaaatcaaggatatacaacatgacactcaagttatctgccttagttgaaactcaaatt
aaaaacatcatctctaactataaacttgccttgaagtgccaaaaaaagatcaaaccaaga
caaaagtataggaaaagattcaagagcagcagcagttcacaatccagtagcaagagcagt
tcacggtctggcagcaggtccacttcccagtcaagcagcaggagcagttctcaatccagg
agcagttcgcgatccaaaggcaggagcagttctcgatccagaagcagaaacagttctcga
tccagaagcagaaacagttctcgatcaagaagcagaaacagttctcgatcaagaagcaga
aacagttctcgatccagaagcagaaacagttctcgatccagaagcaggagtggatctcga
tccagaagcaggagtggatctcgatccaaaggcaggagcagttctcgatccagaagcaga
agcggttctcgatccagaagcaggagtggttctcgatccagaagcaggagcagttctcgg
tccaaaggcaggagcagttctcgaagcagaagcggttctcaatccagaagcaggagcggt
tctcgatccagcagtcgtgcatccagccacaaacacagagcagcaaactctcctaataca
attctgacttcttcgccaccctattttgtaagaacgatttcatcaagatcatctccagct
tcggaaacagatgaactttcaggacgattgaatattgagcttaaacatccacatgtattg
ccacttcctgagtgggatgcacaggataggattcaaagtgattcggagtctgaaaataca
agcataatcaagaacacacttgcaccagtaaagcaagatcaattgtctagtggtccttta
gttaatggccatgaaatgcgcacatctactaaaagaaagttgatgagtgactcagaagaa
agtgatttggacgatacaaatcagggggagatggaagataccgcacaattagacaacgat
gcatcagccaaatctgggtccggatctgaatgcgggccagaatcagtttcaggggttgat
aaagatcatgttgaaggagatcatgattacagcaaggttgtgagaagaaagacaacaggg
aaaggaaatataaaaaacagagtaggagtaagaagaaaaaggaggaggaggaaaggtttc
aaatttaccacgccgacaaacaaatataaaagggcacgactgttggatgattggtttgat
gaagatgaattgtgcattgatcgattaaataaatgttccacaattagaactagaaaccaa
ggcagaagaactgttttatataatgacgactctgatgatggctttgtagcaactgacgag
cccctaaatcttggcacgtcaagatcaggaagaatgaggcgaatgacagagaaggctaag
gcaagtcacctaatgggatggagtcactga
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integrated database retrieval system
