Leucoraja erinaceus (little skate): 129702486
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Entry
129702486 CDS
T09122
Symbol
impg2a
Name
(RefSeq) interphotoreceptor matrix proteoglycan 2
KO
K19017
interphotoreceptor matrix proteoglycan 2
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
leri00536
]
129702486 (impg2a)
Glycosaminoglycan binding proteins [BR:
leri00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
129702486 (impg2a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SEA
EGF
Motif
Other DBs
NCBI-GeneID:
129702486
NCBI-ProteinID:
XP_055500188
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All DBs
Position
13:39238189..39300152
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AA seq
1381 aa
AA seq
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MTSNVHRNLRSSPNIPNVSVDSLFCRLYRRKRMFGYWWKVSSVFPYVLLLNSILVTNTDV
LKRTSGERRLRQNSPGLLHGNIKSHETGSNVQIKDMIRRHKRALLFPNDIKLCPEETVSH
AIDSYLKYYKLRVCQEAIWEAFKIFWDRLPERHEHQTWIDACNQGLLNIFDIGMSFSKTE
EHQHLIMEKVSLQMENVSSLESITTTNATSSENNFTLEAAERISIDGINISVEGNENTTP
GETEQVTKKSSNQIVEFFIQLAGENYTGEELSDPAMWDYQKLTDHVHAKVNLMKAWNESL
EKWLSVPINVSIKLSQFISNNNHNILKSQNPDSSSNVTVHCTVTFDVNTGVLPNETLQFI
NLNSENMEDDLPLETENQPTAAYTITDFRNYIVEALHKENLIGNGSPTFNPETLHFINEH
SMNEALNSIKIELEDQTIESCEFMLLAIELSNKEDEDGQYLESNEASGQFHSTIIDLPSV
QTIEERWRNAEASPVTLTSLEPQSISEEPMPLPSSREFPVFAPSGTDVTTTINVGEKTEE
TSDPLTSQILVSDGIIKQPIFDKGTIFDSESGSGIEEEYLWSWSTIASQTVSSNKPLSGT
QDSTSNQSGGVKTQDDLSMDYDANQSDVNIKGLITNPTAVGMATIISNEADALWSTEAAS
GFGAGIISHVAEAITKEAPVEWMPENVLELTMQTSEPAENDLVAVLPVTELSTKGQAITE
TFVVQPSGAQTSARGNQATDSFILEQFAAGSYAKGHMLTELATIQQEILASAATGHTMIK
SLPAENEAAETTTTGSIKQFLTTVSNLEQLTTEQLSTSSGLSASPWAPTELGIDSSSTAQ
SILDSSNMIQKHTELPNDVQLFSKIPAAVDTVSSNINDTGLNNPVFQNTDSSTVVERGTR
STTGVPYSEYIANTSLAYSGPDNGANSANETIWVLNPRTTSAAVQPTAIPSVTWDVVGEY
VTLEPRDATVIEHNEVKSSQSASQDNEEWSEVQDISVELDHSDIIYPHEESNNDEEMATG
YREYGATAPTDQPVASDSRTSSQALIVFFSLRVTNMIFSDDLFNKSSHEYITLEQRFLEL
LVPYLQSNLSDFKHLEILNFRNGSIIVNSRMKFAKPVPQDVTNAVYLILDDFCNTAYQRM
NLAIDRFSLDVESGNGADPCKFQACNEYSECLVNHQSGEAECVCDTGYLSVDDLPCQSIC
DIDTDFCLNDGKCDTIPGQGAICRCRVGENWWYRGEHCEEYVSETLVVGIAITSVAGFLL
VASVVIFFIANMLRAQYAKSETRASREDDDSLASAENGTKYNPMYESDATTAYSHYKRRY
PHLSPNSSSSGETSANFSSDEIRHVYESTELSKEEIQDRLRIIDLYTKDKQFAEFVRQHQ
T
NT seq
4146 nt
NT seq
+upstream
nt +downstream
nt
atgacaagtaatgttcatagaaatcttagatcctccccaaacataccaaatgtttctgtt
gattctctattttgtaggttgtatcgaagaaagagaatgtttggttattggtggaaagtc
tcttctgtgtttccatatgtccttctactcaattccattttagtgacaaatacagatgta
ttgaagaggacttcaggtgagaggagactgcgtcaaaattcaccgggcctgcttcatggc
aacattaagtctcatgaaacgggaagcaatgtacagataaaagatatgattcgccgacat
aaacgagcccttttgtttccaaatgatattaaactttgcccagaggaaactgtgtcacac
gccatcgacagctacctcaagtattacaagttgagagtttgtcaagaagcaatatgggaa
gcattcaaaatcttctgggacaggttacccgagcggcatgaacatcagacttggatagat
gcttgcaatcaagggctcctaaatatttttgacattggaatgagtttcagcaaaacagaa
gaacaccaacacttgattatggagaaagtatctctacagatggaaaatgtaagtagtcta
gaatcaatcacaaccacaaatgcaacatcatcagaaaacaactttacgctagaagctgct
gaaagaatttccattgatggtattaacatctcagtagaaggaaatgagaacactacccct
ggagaaactgaacaagttacaaagaagtcatcaaatcaaattgtggaattctttatccag
cttgctggggagaattataccggagaggaactctctgatccagctatgtgggattatcag
aaactgactgatcatgtccatgccaaggtaaacttaatgaaagcctggaatgaaagcctg
gaaaagtggttgtctgtgccaatcaatgttagcattaaacttagtcaatttataagcaac
aacaaccacaatatattgaaaagccagaatccagacagcagtagtaatgtgacagttcac
tgcactgttacatttgatgtgaacactggcgttttaccaaacgaaacacttcaattcatc
aacctaaactccgaaaacatggaagatgaccttcccctggaaactgaaaatcaacctaca
gctgcgtacacaattactgactttaggaattacatagttgaggccttgcataaggaaaat
ctaatcggaaatggatcaccaacttttaatccagagacccttcattttattaatgagcat
tcaatgaatgaagcattaaacagcattaaaattgaactggaagatcagacaatagaatcc
tgtgaatttatgcttttggctatagaactttcaaacaaagaggatgaagacggacaatac
ctggagagtaatgaagcatcaggacaattccattcaacaattattgatctgccgtctgtc
caaacaattgaggaaagatggcggaacgcagaagcctcccctgtcactttaacttctttg
gagccgcaaagtatatctgaggagccaatgccactgccaagcagcagagagttcccagta
ttcgcaccatctggaacagatgtgaccacaacaattaatgttggtgaaaaaacagaagag
acctcggatcccctcacatcacagatccttgtatctgacggtataataaagcagcccatt
tttgacaaaggtaccatttttgactccgaatctggttctgggattgaagaagaatatttg
tggtcctggtctacgatagcttctcaaacagtttcttccaacaagccactaagtgggaca
caggatagcacttctaatcagtcgggaggtgtgaagactcaggatgatttgtctatggat
tatgatgccaatcaatccgacgttaatatcaagggattgattactaatccaactgcagta
ggcatggccacaatcatctcaaatgaagcagatgcactttggtcaactgaagcagcttca
ggttttggtgctggaatcatatctcatgttgcagaggcaataacaaaagaagccccagtt
gaatggatgccagaaaatgtgctagaattaacaatgcaaacatctgaaccagctgaaaat
gacttggttgcagtgttgccagtcactgaattatccacaaaaggtcaagctataacagaa
acctttgtcgtgcaaccgtctggagcacagacatctgccagaggaaaccaagccactgat
tcattcatcttggaacagtttgccgcaggatcttatgccaaagggcacatgttaactgag
ttggccaccatacagcaagaaatattggcatcagctgccacaggtcacacaatgataaag
tctttgcctgcggaaaatgaggcagcagagacaaccaccacaggctccattaagcaattc
cttacaacagtttccaacctggagcaactgaccactgagcagttatccactagcagtggt
ctctctgcatcaccatgggcgcccacggaactgggcattgattcctcctccacggctcaa
tcaatactggattcttcaaatatgatccagaaacacacagaattaccaaatgacgtgcaa
ctttttagcaaaatacctgctgcagtagacactgtgtcatccaacattaatgatactgga
ttgaacaatcctgtctttcagaacacagatagttctacagtcgttgaacgtggtactcga
tcaactacaggggtgccctattctgagtacattgccaacacgtctcttgcatacagcgga
cctgataatggtgctaattctgctaatgaaaccatttgggttttaaaccccaggacaaca
tctgcagcggtgcaacccactgccataccgtctgtcacatgggatgtggtgggagagtat
gttactttggagccccgtgacgctactgttatagagcacaatgaggtcaaatcatctcaa
agtgcatcgcaggataatgaagagtggtctgaggttcaagatatctcagttgaactggat
cattcagacataatctatcctcacgaagaatctaacaatgatgaagaaatggcaactggc
tacagagaatatggtgctaccgcaccaacagatcaacctgtagcaagtgatagtcgtaca
tcttcacaggcactgatagtcttcttcagcctgcgtgttacaaatatgattttttcagat
gacctgttcaacaaaagttcacatgagtacataactttagagcagcgattcctggaactt
cttgttccttatttgcagtccaatctatctgattttaagcaccttgaaatcctgaacttc
agaaatggaagcatcattgtgaacagccgtatgaagtttgcaaagcctgtaccacaagat
gtcaccaatgctgtttatctaatcttagatgacttttgcaacacagcataccaaagaatg
aaccttgccattgatagattttctctggatgttgaatcaggtaatggtgcagacccgtgc
aagtttcaagcatgtaatgaatattctgaatgcctggtaaaccaccaatcaggcgaggct
gaatgtgtctgtgatactgggtatttaagcgtagatgacctgccctgtcaaagtatttgt
gatatagacacagacttctgtctcaatgatggcaaatgtgatacaattccaggccaagga
gcaatctgcaggtgccgtgtgggtgagaactggtggtacagaggagagcactgtgaagag
tatgtttctgaaacactcgttgtgggcattgctatcacctcagtcgctggtttccttttg
gtagcttccgttgtgattttctttatagccaatatgctccgtgctcaatatgccaaaagt
gaaactcgcgcatcgagagaagatgacgatagcctggcctcagcggaaaatgggacaaaa
tataaccctatgtatgagagtgatgccacgactgcatatagccactacaagagacgctac
ccacatttatccccaaacagttcaagcagtggagagacatctgccaacttcagcagcgat
gagattcgacatgtctatgagtccactgaacttagcaaagaggaaattcaagacagactt
cggataatagatctgtatactaaggataagcagtttgcagagtttgtgcgacaacatcag
acgtaa
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