Leucoraja erinaceus (little skate): 129702536
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Entry
129702536 CDS
T09122
Symbol
gtf2e1
Name
(RefSeq) general transcription factor IIE subunit 1
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
129702536 (gtf2e1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
leri03021
]
129702536 (gtf2e1)
Transcription machinery [BR:
leri03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
129702536 (gtf2e1)
Prokaryotic type
Archaeal type
TFE
129702536 (gtf2e1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
TFIIE-A_C
Zn_Ribbon_TF
Zf-C2H2_ZNF451_C
DUF7385
Cas12f1-like_TNB
zf-H2C2_2
Motif
Other DBs
NCBI-GeneID:
129702536
NCBI-ProteinID:
XP_055500256
LinkDB
All DBs
Position
13:2887984..2955100
Genome browser
AA seq
436 aa
AA seq
DB search
MTDPDVVTEVPAALKRLAKYVVRGFYGLEHALALDILIRNPCVKEEDMLELLKFDRKQLR
AVLNTLKSDKFIKSRMRVETAPDGKTTRHNYYFINYRLLVNVVKYKLDHMRRRIETDERD
STNRASFKCPNCYKTFTDLEANQLFDLMTGTFRCTFCQTEVEEDESALPKKDARTLLARF
NEQIEPIYALLRETEDVNLAYEILEPEPTEIPSLRASQRAQGAGCNMNSQKELWANKGPT
YEDLYTQQVIINMEEQDVQHKVASDGKPVKERPIWMRESTVRGGFTDSEELQEGDMDADS
YHDRDGKGNPLEANEEVMQTLLIHEKKSTSAAAAAAAAAIPASNASDSESDTSESEDELP
RPQAMAMSAAAAAAFPVVTGAEEDEEFEDEPTVLVAGQPYSYSQVSQCEGLVAQMTAEEK
EAYIAMGQRIFQDMYE
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgactgatccagacgtagtgactgaagtgcctgcagctttgaaacgacttgccaaatat
gttgtgagaggattttacgggcttgagcacgcgctagctttggatatccttattaggaac
ccctgtgtcaaagaagaggacatgttggagctgctgaaatttgaccggaaacaactgcga
gcggttttgaacacattgaaaagcgacaaatttattaaaagtagaatgcgagttgaaact
gctcctgatggtaaaaccacgagacataattactacttcataaactaccgtctcctggtg
aacgtggtcaagtacaaactagaccacatgaggcgaaggattgagacagatgaacgagac
tccacaaacagagcctcttttaaatgccccaactgctacaagacgttcacggacttggag
gccaaccaactatttgatctcatgacaggaaccttccgatgcactttctgtcagactgag
gttgaagaggatgaatctgcgttaccaaagaaggacgccagaacacttttggcaaggttc
aatgaacagattgaaccaatctatgctctactgcgtgaaactgaagatgttaacctggct
tatgaaatcctggagccagaaccgacagaaattccgtcactcagagcaagtcaacgagcc
caaggtgctggctgtaatatgaattcccagaaagaactctgggctaacaaagggcccact
tatgaggatctgtacactcaacaagtgatcatcaacatggaggaacaggatgtccagcac
aaagtagcttctgatggcaagccggttaaggagagaccaatctggatgcgagagagcact
gtccgaggtggcttcaccgactcggaggaactccaagaaggcgacatggacgctgactcg
taccacgaccgtgacggaaaaggcaacccgctggaagcaaacgaggaggtcatgcagacg
ctgctcatccatgagaaaaagagcacgtcggctgccgcagctgccgcagccgccgccatc
ccagcctccaacgccagcgactctgagagcgacacgagcgagtctgaggacgagttgccc
cggccgcaggccatggccatgtcggcggcggcggcggcagcgttcccggtggtgaccggc
gccgaggaggacgaggagtttgaggacgagccgacagtcctggtggcagggcagccctac
tcctacagtcaggtcagtcagtgcgaggggttagtggcacagatgacggccgaagagaag
gaagcttacatcgccatggggcagcgaatattccaggatatgtacgaatga
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