Leucoraja erinaceus (little skate): 129702576
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Entry
129702576 CDS
T09122
Name
(RefSeq) HMG box transcription factor BBX
KO
K21643
HMG box transcription factor BBX
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
leri03000
]
129702576
Transcription factors [BR:
leri03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
129702576
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DUF2028
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
129702576
NCBI-ProteinID:
XP_055500336
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Position
13:complement(5638446..5797913)
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AA seq
759 aa
AA seq
DB search
MKASSRNKDHSADGDGTGKRPKRKCLQWHPLLAKKMLDFSEEEEEDEEDEDIDKDALMST
EGLEHEADETDDDSSEQRARRPMNAFLLFCKRHRSLVRQQHPRLDNRGATKILADWWSVL
DPKEKQKYTDLAKEYKDAFLKANPGYKWCPTTNKPLKSPSPTVTTRKKLWTFPTDPTKDF
PIIKRVVNTEEMPQINFAMADPTQMGGLSMLLLAGEHALTAKEISSGTVQPGVVESTRPC
GNSALFQLAEMCSDRLVTEGVKNEPGTEMEEEQCRPEIPSGNPALGTQSDDEAGPKEWIT
NDKPLSLLTGNSVTSLNKGEKMKKKKKKKKVKLESTKVDKQTFKKSGKKRKSLDSDIDSL
MYTIDAVAKGDWGTEKPSGSPVKSARCSPKSTENQLHVDSSPPKKKMKPKQIKLPAEKVS
ELDNLSKVCDLEKIATSPVKTEMFPVTDQILPHDALSEVKGENKELSKKTEASGSRKSER
ACKGALYKTLVSEGMLTSLRANVDRGKKASGKGGSSDHEGCWKEEDWTFSNVGSSGTKKL
KKLKPKDESALGLGNLEQEFEKKFNSLPQYSPVTFDRKNTTVTRKKKKTRSGSTEQQKCD
KAIVPQDSNSEDHAGKVELAAAVPSLLAATQEPLVGSQKRKARRTKITHLIRTADGRLSP
AGDLTKEKVSCKPEKKRQQRKAEGLTGVHNSSWGTEQACSISPEVQTTSAIPAFFSLAAL
AEVAAMENAHRGQRAVSLSHDGQPKDMAQTPVLISCADQ
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgaaagccagcagcagaaataaagaccactcagcagatggtgatggaactgggaaacga
cccaaacggaagtgtctccagtggcatccgctgcttgccaagaagatgctggacttctct
gaggaggaggaggaggatgaggaggatgaagacattgataaggatgccctgatgagtacc
gagggtctggaacacgaggcggatgagacggacgacgactcttccgagcaacgtgcccgc
aggccaatgaacgcgtttcttctcttctgcaaacgccaccgctccctggtccgtcagcag
caccctcgtctcgacaatcgcggtgcaacaaagattctagcggactggtggtctgtccta
gatccaaaggaaaaacagaagtacaccgacctggcgaaggagtacaaggatgcctttcta
aaagctaaccctggctacaagtggtgtccgaccaccaacaagcctctgaagagtccctcg
cccaccgtcaccaccagaaagaagctgtggacctttccaacagaccccacaaaggacttt
cccattatcaagcgggtggtgaatactgaggaaatgccacaaatcaactttgccatggca
gatcccactcaaatgggaggactcagcatgctgctcttagcaggagaacatgccttaacg
gccaaggagatttcctccggcacggtacagccaggggttgtggagtcgacaagaccgtgt
gggaattcagcattgtttcagttagcagagatgtgctcggatcggctggttacagaggga
gtgaagaatgagcctgggacagagatggaggaggagcagtgtcggcctgagatcccgtct
ggcaatccggccctcggtacacagagcgatgatgaagctgggcccaaggagtggatcacc
aacgacaaacccttgtctttgctaactggcaattctgtgacgagtcttaacaaaggggaa
aaaatgaagaagaagaagaaaaagaagaaagttaaactcgaatctaccaaagttgataaa
cagacatttaaaaaaagtggcaagaagcggaaatcattggattctgacattgatagctta
atgtacactatagacgctgtggctaagggtgactggggcactgaaaagccttcgggaagt
ccagtgaaaagtgctcgatgttcaccaaagtcaacggaaaatcagttgcacgttgactcc
agcccaccaaagaaaaaaatgaaaccaaaacaaatcaaattacccgcagagaaggtctcc
gaacttgacaacctctcaaaggtttgcgatcttgagaagatcgccaccagccccgtcaaa
actgaaatgtttcctgtcacggatcaaatacttccccacgatgcactaagtgaagtgaaa
ggtgaaaacaaggaactgagtaaaaaaacagaagcctctgggtcccgcaaatctgagcgt
gcgtgcaaaggtgccctgtataagactcttgtgtcagagggcatgttgacatctctccga
gctaacgttgatagaggcaagaaagcttcagggaaagggggttcctcggatcacgaagga
tgttggaaggaggaagattggacgttttcaaatgtggggagcagtggaaccaaaaagttg
aagaaattaaaaccgaaagacgaatcggctcttgggttggggaacctcgagcaggagttt
gaaaagaagttcaacagccttccacagtacagtccggtgacctttgatcgcaagaacacg
acggtgacgaggaaaaagaagaagaccaggagtggatccactgagcagcagaaatgtgat
aaagccatagtcccacaagacagcaactctgaggaccacgcagggaaggtggagctggcc
gcggccgttccaagcctcctggcggcgacccaggagccgcttgttggcagccaaaagcgc
aaggccagaagaaccaagatcacgcacctgatccggacagctgacggaagattgtcgcca
gcaggggatctaacaaaggagaaggtctcttgtaaaccggagaagaagaggcagcagcgg
aaggcggaaggtttgactggggtccacaacagcagctggggaactgagcaggcatgcagt
atttcaccagaagtgcaaactacatcagctatcccagccttcttcagtttagctgccttg
gcagaggtggcagccatggaaaatgcacacagaggtcagcgtgcggtgtctctgagccac
gatgggcagcccaaggacatggcacaaaccccagtacttatctcctgcgctgaccagtaa
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