Leucoraja erinacea (little skate): 129702634
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Entry
129702634 CDS
T09122
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 16-like
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
leri
Leucoraja erinacea (little skate)
Pathway
leri03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
129702634
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
leri01002
]
129702634
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
leri04121
]
129702634
Enzymes [BR:
leri01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
129702634
Peptidases and inhibitors [BR:
leri01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
129702634
Ubiquitin system [BR:
leri04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
129702634
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
Motif
Other DBs
NCBI-GeneID:
129702634
NCBI-ProteinID:
XP_055500456
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All DBs
Position
13:11527618..11573022
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AA seq
934 aa
AA seq
DB search
MPPGPLLRLVALGAFLLANYPPRSWTSLGHRRSQTAGRSRTRESESNRRRRRRLTSLCPS
VRGWSRSGSGSGRGGESSRTGSQIIALATEMGKKKERRNSAQDDEASDNQVPPCTHFRKD
LNIGKIKKRLAQPWCSACEDCKDDVKTEGKCEKPDEAPSVWLCLKCGHKGCGRNSEGQHA
LQHYKEPHSDGHSLALCLENWSAWCYLCDNYVYYEDKDQLGQFVKSVQKMIADKSSKEVT
AVLPPSHEKDQDKGKEDNATAIEIEKTSRQSNQQPSVKGLSNLGNTCFFNAVLQILSQTY
VLKETIQGIKTNGNTVTIITPDSSNLGHLEIHTDQLGPLSSAMHQFLLEIQDTKKSVVTP
KDLFTQVCKKAMRFRGYQQQDSQELLHYLLDGMRTEEIKRIGAGIVKALNYSSEKGEDEE
RERIMKVYEKEASEFNFVDQVFGGILTNTIMCEQCKMVTLVEEYFLDLSLPVQDDQGDKK
KSQGKGRRNVVEDNQNENLSQCNGKFVSKDRGDISTSPSKYEQKKAKKQAKKQAKHQQRQ
QKSQTRSLVLEDSTTLDEEQKEKNDASDESKEDLASNGIEAEVSPAPELDNTDSLLTDQC
LGKATKENMADDGQELSQENVDAGNEDTSDETGPKKIHSNDSHNSNDLDSSDTFESHRVT
EDLVSASSEDEETIIKNMNELNMNESSMKHDDEITSNRLEFENSSETTNDLLASIKDKQV
VFLDAEEAFRTLSDRKLLSVQECSLEACLRQFTQIENLTGANKLLCEECTRRQYKSGSKI
NANDIKHVYTDAKKQILVSSSPPILTLNLKRFEQLGFALRKINKHINFPQVLDLAPFCTT
DCNNIKDCTNILYSLYGVVEQSGTMRSGHYTAYVKTRTPNTHLSEYVLTRGKVSRIDAEA
PRGRWFHVSDSHVQEASETKVLNAQAYLLFYERI
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgccgcctgggccgctgctgaggcttgtggcactcggtgcctttcttctcgccaactat
ccgccgcgttcgtggacttctctcggccaccgtcgctcccagacggccggccggtcgcgc
acgcgcgagagcgagagcaaccgcaggcgccgtcgccggttgacgtctctctgtccgtcc
gtccgcggctggagcaggagcgggagcgggagcgggaggggcggtgagtcttcaaggacg
ggtagtcaaataattgcattagcaactgaaatgggaaagaagaaggaaagacgaaattct
gctcaggatgatgaggcatctgacaatcaagtgcctccatgtacacattttcgtaaggat
ttgaacattggcaaaattaagaagcgtttggcccaaccttggtgcagtgcttgtgaggac
tgcaaagacgatgtcaaaacggagggaaaatgtgagaaacccgatgaagctccatctgtc
tggctgtgcttaaaatgtgggcataagggttgtgggaggaattcggaaggacaacatgct
cttcaacattataaagagccacattcggatggacattctttggctctttgtttggagaac
tggagtgcatggtgctacttgtgtgataattatgtttattatgaagacaaagatcagtta
ggacaatttgtaaaatcagtccaaaaaatgattgctgataaatcgtctaaagaagttaca
gctgtacttccaccatcacatgaaaaagatcaggataagggaaaggaagacaatgcaaca
gcaattgagatagagaagacttctcgacagagcaaccaacaaccgtcagtaaaaggactc
agcaatcttgggaatacatgttttttcaatgcagttctacagatcttgtcacagacatat
gtgctaaaagagacgattcagggaataaaaacgaatggaaatactgtgacaattataact
cctgattcttcaaacttgggacatctcgaaattcatactgatcaactaggcccactctcg
tcagcaatgcatcaatttcttcttgaaattcaagataccaaaaagagtgttgtcactcca
aaagatctcttcactcaagtctgtaaaaaggctatgcgatttagagggtaccaacagcag
gatagccaggagttgcttcattatttattggatggaatgcgaaccgaggagatcaaacga
ataggtgctggcattgtaaaagccttaaattattcttcagagaagggggaagatgaagaa
cgtgagagaatcatgaaagtttacgaaaaggaagcgtcagagttcaattttgttgaccag
gtctttggtggcatattgacgaatacaatcatgtgcgagcagtgtaaaatggttacatta
gtggaggaatattttttagacttgtcacttcctgttcaggatgaccagggtgacaagaaa
aaatcccagggaaaggggagaagaaacgtggttgaagataatcaaaatgaaaatcttagt
cagtgcaatggaaagtttgtctctaaggacagaggagatatttcaactagcccaagcaaa
tatgaacaaaagaaggcaaaaaaacaagctaaaaagcaagccaagcaccaacaacggcag
cagaagtcccaaacaagatcgcttgttttggaggactctactactttggatgaagaacag
aaagaaaaaaatgatgcctctgatgaaagcaaggaagacttggcatcaaatggcattgaa
gcagaggtctctccagcaccagagctggataatactgacagcttattaactgaccagtgt
ctcgggaaagctacaaaggaaaatatggcagatgatggtcaagaattgagccaagaaaac
gttgatgctggcaatgaagacacatctgatgaaactgggcccaaaaaaatacactctaat
gattcccacaactccaatgacttggactcttcagatacatttgagtcacatagagtgact
gaggacctagttagtgcatccagtgaagatgaagaaactattattaaaaatatgaatgaa
ctaaatatgaatgagagctcaatgaaacatgatgatgaaataacttcaaatcgattggaa
ttcgagaactcttccgaaaccacaaatgatctactcgcttccattaaagacaaacaggtg
gtttttttggatgcagaggaagcatttcgcacactttcagacagaaagttgctgagtgta
caggaatgttctctggaggcttgtttacggcagttcactcagatagaaaatctcactgga
gccaataaactgctctgtgaagaatgtacccggaggcagtataaaagtggatcaaaaatc
aatgcaaatgatatcaagcacgtgtacactgatgccaagaaacaaattcttgtttcgtcg
tcacctccgattctgacacttaatttgaaaaggtttgagcagttgggatttgctcttcgc
aaaataaacaagcatatcaatttcccgcaagttcttgatcttgctccattctgtacaacg
gactgtaataatattaaagactgtacaaatatattgtacagtctatatggagttgtggaa
cagagcggtacaatgagatctggacattatacagcatatgtcaagacacgaactcccaac
acccacctttcagaatatgtgctgactagagggaaagtgtcaaggatcgatgcagaggca
cccaggggaagatggttccatgtaagcgatagccatgtgcaggaagcgtcagagacaaaa
gtattaaatgcacaggcctacctgctgttttatgagaggatctaa
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