Leucoraja erinaceus (little skate): 129702702
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Entry
129702702 CDS
T09122
Symbol
usp9
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
leri01002
]
129702702 (usp9)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
leri04121
]
129702702 (usp9)
Enzymes [BR:
leri01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
129702702 (usp9)
Peptidases and inhibitors [BR:
leri01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
129702702 (usp9)
Ubiquitin system [BR:
leri04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
129702702 (usp9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
FAST_1
Motif
Other DBs
NCBI-GeneID:
129702702
NCBI-ProteinID:
XP_055500596
LinkDB
All DBs
Position
13:24672946..24892726
Genome browser
AA seq
2553 aa
AA seq
DB search
MTATTRGSPVGGNDNQGQAPDGQSQPPLPQNQTSSPNASSENSPVSPPDEQGQGDAPPQL
EEEEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEASIDLSKKSLDIKSEACQRFF
RDGLTISFTKILTDEAVSGWKFEIHRCIINNTHRLIELCVAKLSQDWFPLLELLAMALNP
HCKFHIYNGTRPSETVPAGVQLAEDELFARPPDPRSPKGWLVDLINKFGTLNGFQILHDR
FVSGSALNVQIIAALIKPFGQCYEFLTLHTVKKYFLPIIEMVPQFLENLTDEELKKEAKN
EAKNDALSMIIKSLKNLASRVPGQEETVKSLEIFRLKMILRLLQISSFNGKMNALNEVNK
VISSVSYYTHRHGSPEEEEWLTAERMAEWIQQNNILSIVLRDSLHQPQYVEKLEKILRFV
IKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKASWTNAS
KKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDQALSAHIKILDYSC
SQDRDTQKIQWIDRFVEELRTNDKWVIPALKQIREICSLFGEAPQNLSQTQRSPHVFYRH
DLINQLQHNHSLVTLVAENLSAYMENIRQFHKENPEYDPQTVRSGSRYSHVQEVQERLNF
LRFLLKDGQLWLCAPQAKQIWKCLAENAVYLCDREACFKWFSKLMGDEPDLDPDINKDFF
ENNVLQLDPSLLTENGMKCFERFFKAVNCREGKLVAKRRAYMMDDLELIGLEYLWRVVIQ
GSDDIASRAIDLLKEIYTNLGPRLQVNQVEIHEDFIQSCFDRLKASYDTLCVLDGDKDSI
NCARQEAIRMVRVLTVLREYINECDSDYHEERTILPMSRAFRGKHVSLVVRFPNQGRQVE
DLDIWSHTNDTIGSVRRCILSRIKANSAHTKVELFIGGELVDPADDRKLIGQLNLKDKTL
ITAKLTQISSNMPSSPDSSSDSSTGSPGNHANHYSDGPNPEVESCLPGVIMSLHPRYISF
LWQVADLGSSLNMPLLRDGARVLMKLMPPDNTTVEKLRAICLDHSKLGESSLSPNLDTLF
FGQSASQVLYLTEVVYALLMPASAPLGEDASDFQYNFLKSGGVSLVLGMLTRNNFLLNAD
VETRRAAYLNALKIAKLLLTAVGYGHVRAVAEAFQPVVEGSSNVSPINHATHSQAVVLQN
ALHSIPNPTSECMLRNVAIRLAQQISDEALTHAEASKYIPDICVIRAVQKIVWASGCGSI
QLVFSSSEEISKIYEKTNAGSEPDSEDEHVCCEALEVMTLCFALVPTALDTLSKEKAWQT
FIIDLLLHCHSKAVRQMAQEQFFLMATRCCMGHRPLLFFITLLFTVLASTARERAKHSAD
YFTLLRHLLNYAYNSNINLPNAEVLLNNEIDWLKRIRDEVKRTSETGVEETILEGHLGVT
KELLAFQTSEKKFHIGSEKGGANLIKELIDDFIFPASNVYLQYKKSGELPSEQAIPVCSA
PAAINAGFELLVALAVGCVQNLKQIVDTITDMYYAGCEALTEWEYLPPVGPRPSKGFVGL
KNAGATCYMNSVIQQLYMIPAIRNGILTIEGTGSDVDDDASGDEKQDNESNVDPRDDVFS
YHHHYDKPVIGKTEDRKEYNIGVLRHLQVIFGHLAASRLQYYVPRGFWKQFRLWGEPVNL
REQHDALEFFNSLVDSLDEALKALGHATMLSKVLGGSFADQKICQGCPHRYECEESFTTL
NVDIRNHQNLLDSLEQYVKGDLLEGANAYHCEKCNKKVDTVKRLLIKKLPPVLAIQLKRF
DYDWERECAIKFNDYFEFPRELDMEPYTVAGVAKLEGDDINPENQLIQNDQPDNEQPGST
KYRLVGVLVHSGQASGGHYYSYIIQRNGGDGEKNKWYKFDDGDVTECKMDDDEEMKNQCF
GGEYLGEVFDHMMKRMQFRRQKRWWNAYILFYERMDTIDKDNELIKYISELEISIKPHQI
KMPIVIERSVRKQNVQFMHNRMQYSLEYFQFIKKLLTCNSVYLNPPPGQDHLLSEAEELA
MISIQLAARFLFNTGFHTKKIVRGPASEWYDALCILLRHSKNVRCWFAHNVLFAYPNRFS
EYLLECPSTEVRSAFAKLIVFLAHFSLQDGPCPSPFTSPGPSTQAFDNLSLSDHLLRAVL
NLLRREVSEHGRHLTQYFNLFVMYANLGMAEKTQLLKLNVPATFMLVALDEGPGPPIKYQ
YAELGKLYAVVSQLVRCCDVSSRMQSSINGNPPLSNPYGDPNLSQPIMPIQQSVADILFV
RTSYVKKIIEDCSNSEETIKLLRFCCWENPLFSSTVLSELLWQVAYSYTYELRPYLDLLL
QILLIEDSWQTHRIHNALKGIPDDRDGLFDTIQRSKNHYQKRAYQCIKCMVALFSSCPVA
YQILQSNGDLKRKWTWAVEWLGDELERRPYAANPQYTYNNWSPPVQSNETSNGYFLERSH
SARMTLAKACELCPEEEQDDQDAPEDHDSSPPEDAPLYPHSPNSQYQQQNNHVHGQPYTG
PVAHHMNNPQRTGQRAQENWEGSEDIPASQTKD
NT seq
7662 nt
NT seq
+upstream
nt +downstream
nt
atgacagccacgacccgtggctctccagtaggagggaatgacaaccagggccaggctcct
gatggccagtcccaacctcctcttccacagaatcagacctcttcacctaatgcatcaagt
gaaaactcaccggttagccctcctgatgaacaaggacaaggtgatgctcctcctcaactt
gaggaagaggaacctgcatttcctcataccgatttagcaaagctggatgatatgatcaat
agacctcgttgggtggtcccagtgttgccgaaaggtgaattagaagttttacttgaagct
tctatagaccttagtaaaaaaagccttgatattaaaagtgaagcatgtcaacgctttttc
cgtgatgggctcacaatttctttcacaaaaattttaacggacgaagctgtgagtggttgg
aaatttgaaattcatagatgtattataaataatacccatcgcctcatagaactgtgtgtg
gccaagctgtcccaggactggtttcctcttcttgaactccttgcaatggccttaaaccct
cactgcaaatttcatatctacaatggtacacgcccctctgaaactgttcctgctggagta
cagctggctgaagatgaactctttgcacgtccgccagatccacgttcacctaagggttgg
cttgtggatcttatcaacaagtttggaacattaaatggatttcagattctacatgatcga
tttgtcagtggttcagcattaaatgttcagataattgcagcactcatcaaaccttttggc
cagtgttacgaatttctcaccttgcatacggtgaagaaatacttccttccaataatagaa
atggttccacagtttctagaaaatctaacagatgaagaactgaagaaagaagcaaagaac
gaagctaaaaatgatgctctatctatgataattaaatcgctgaaaaacttagcttcacgg
gttcctgggcaggaggagacggtcaaaagtttagaaatatttaggttaaaaatgatactt
agattgttacaaatttcatctttcaatgggaagatgaatgcactaaatgaagttaacaag
gtgatttccagtgtgtcttactatactcatcgccatggcagtcctgaagaagaagaatgg
ttgacagctgagagaatggcagagtggattcagcaaaacaacattctatcaattgtgttg
cgtgacagtctacatcaaccacaatatgttgaaaaactggagaaaatacttcgctttgtc
ataaaagagaaagcactcaccctgcaagatcttgacaatatttgggcagcacaggcaggt
aaacatgaagcaattgtgaaaaatgtgcatgatctacttgcaaaattggcatgggatttt
tctccggaacagcttgatcatctttttgattgctttaaggcaagttggacaaatgcaagt
aaaaagcagcgtgaaaagcttctagaattgatccgtcgtctagctgaggatgacaaagat
ggtgtaatggcacataaggtgttaaatctgctgtggaatttagcacatagtgatgatgta
cctgttgacataatggaccaggctttaagcgcacacatcaaaatcctggattacagttgt
tctcaggatcgggatactcaaaagattcagtggatagatcgttttgtggaggaactccgt
acaaatgacaaatgggtcattcctgctttgaaacaaattagggaaatctgtagtttattt
ggcgaagcaccacaaaatttaagtcagacccaaaggagtcctcatgtgttctatcggcat
gatttgattaaccagcttcaacacaatcattcgttggttaccttggtagctgaaaaccta
tctgcatatatggagaacatacggcagtttcataaagagaacccagagtatgatccacaa
accgtaaggtcaggaagccgctatagtcacgtgcaagaagtccaagaaagacttaatttc
ttgagatttttattgaaggatggccagctatggttgtgtgctcctcaagctaagcagatc
tggaagtgtttggctgaaaatgctgtctacctttgtgatcgtgaagcctgttttaagtgg
ttttcaaaattaatgggagacgagcctgatttagacccagacattaacaaggacttcttt
gaaaacaatgtgctacaactggacccttctctcttaacggaaaatggaatgaagtgcttt
gaacgttttttcaaagctgtgaactgtcgagaagggaagctagtagcaaaacgtcgtgct
tatatgatggatgatcttgagttaattgggctggaatatctatggagggttgttattcaa
ggaagtgatgacattgctagtcgagcaatagatctgctgaaggaaatatacacaaatctt
gggccaaggttgcaggttaatcaagttgagattcatgaagactttattcagtcgtgtttt
gatcgattgaaggcctcatatgacacgctgtgtgtactggatggcgataaagacagtatt
aattgtgcaaggcaggaggcaatacggatggtacgtgtcttgacagtgctgcgggagtac
ataaatgaatgtgacagtgactaccatgaagaacgaacaattctacccatgtctagagct
tttcgtggaaaacatgtgtcactggttgtgcggtttccaaatcaaggacgtcaagtggaa
gatttggatatttggtctcacacaaatgacaccattgggtctgttcggcgctgcattctg
agtagaataaaagccaacagtgcacatacaaaagttgaactgtttattggtggtgaactt
gtagaccctgctgatgataggaaattgattggacagttaaacctgaaagataaaacactt
attacagccaagctaacacagataagttcaaatatgccatcaagtcccgatagctcatct
gattcttcaactggctcacctggaaatcatgccaaccactacagtgatgggcccaaccct
gaggtagaaagctgtttacctggagtgataatgtccttgcatccccgatacatttccttc
ctctggcaagttgcagatctgggcagtagtttaaacatgccacttctgagagatggtgct
cgtgtcctcatgaaactcatgccccctgataacactaccgtagaaaaacttagggctatt
tgcttggatcattcaaagcttggtgaaagcagcctcagtccgaacttggacacgctcttc
tttggacaatctgcctcacaggtgttatatctaactgaggtagtatatgccttgttaatg
cctgctagtgcacctttgggagaagatgcaagtgatttccaatataacttcttaaaaagt
ggtggcgtctcccttgttctgggcatgcttacgaggaataattttctgctaaatgctgat
gtggagacacgaagggctgcctatcttaatgcactaaaaatagccaagttattgctcacg
gctgttggatatggccacgttagagctgtggcagaagcatttcaaccagttgtggaagga
tcaagcaatgtttcgccaataaatcatgctacacatagccaagctgtagtactgcaaaat
gcgctgcacagcattcctaatcctacttctgaatgtatgttgagaaatgtagccatccgc
cttgcccagcagatttcagacgaggcactaactcatgctgaggcttcaaaatacatccca
gatatttgtgtcattagagcagtacaaaaaattgtttgggcctccggttgtggctcaata
cagcttgtgttcagttcaagtgaagagatcagcaaaatatatgaaaaaacaaatgccgga
agtgagccagattctgaagatgagcacgtgtgctgtgaagccctggaggtgatgacacta
tgctttgcattggttccaacagcactagatacacttagtaaagaaaaggcatggcagacc
ttcataattgatctgctgctccactgtcacagcaaagcagttaggcagatggcccaagag
cagttctttctaatggctaccagatgctgtatgggacatcggccgctgctattcttcatt
actctgctcttcacagtattagcaagtactgcaagagagagagcaaaacattcagcagat
tacttcacacttttaaggcatctgcttaactacgcgtacaacagtaacattaacctgcct
aacgcagaagttctgctcaacaatgaaattgactggctcaagaggattagagatgaggta
aagagaacaagtgaaactggtgttgaagaaacaattctggagggtcatcttggagttaca
aaggagctattggcattccaaacatctgaaaagaaatttcatattggttcagaaaaagga
ggagcaaatctcattaaggaactgatagatgacttcatctttccagcctctaatgtgtac
ttacaatacaagaagagtggagagttgccatctgaacaagcaattcctgtctgcagtgca
cctgcagcaatcaatgctggctttgaattgctagtagcattggctgttggttgtgtgcaa
aacctcaaacaaatagtggacaccataacagacatgtactatgcaggttgtgaagcactg
acagagtgggaatacttgccgccagtaggaccacgtccatcaaaaggatttgtaggattg
aagaatgctggtgctacttgttatatgaattctgttattcaacagctgtatatgattcca
gctatcagaaatggtatccttactatcgaaggcacaggcagtgatgttgatgatgatgca
tctggtgatgaaaagcaggacaacgagagcaatgttgatcctagagatgatgttttcagt
taccaccaccattatgacaaaccagtaattggaaaaactgaagatcgaaaggagtacaat
attggagttctgagacatctgcaagttatttttgggcatttggctgcctccaggttgcag
tactatgtgcctagaggtttttggaagcagttcaggctttggggtgagccggtcaatctt
cgagaacagcatgatgctttggagttcttcaattcattagtggatagcctggatgaagct
ttaaaagctctgggacatgcaacgatgctcagcaaagttcttggtggttcgtttgctgat
caaaaaatatgtcaaggttgtcctcacaggtatgaatgcgaggaatccttcacaacactg
aacgtcgacattagaaatcatcaaaaccttcttgactcacttgagcagtatgtcaaagga
gacttactggaaggtgccaatgcataccattgtgagaaatgtaataaaaaggtggataca
gtgaaacgtttgctaataaagaagttgccaccagttttagcaattcaactcaagcgattt
gactacgactgggaaagggaatgtgcaattaaattcaatgactattttgagtttcctcga
gaattggacatggagccctacacagtggctggagttgccaaattggaaggggatgacatc
aacccagaaaatcagttgattcaaaatgaccagccagataatgaacaacctggtagcacc
aaatatagactagttggtgtgctggtgcacagtggtcaggccagtggtggacattactat
tcatatattattcaacgaaatggtggcgatggtgaaaaaaataagtggtataagtttgac
gatggtgatgtaactgagtgcaaaatggatgacgatgaagagatgaaaaaccaatgtttt
ggtggtgaatacttgggcgaagtgtttgatcatatgatgaaacgtatgcaattcaggcga
caaaaacgatggtggaatgcctacatccttttttatgaacgaatggacaccatagataaa
gataatgaattaattaagtacatctctgagcttgagattagcattaaaccacaccagata
aaaatgccaattgttattgagcgaagcgtccggaaacaaaacgtgcaatttatgcacaac
agaatgcagtatagtttggagtatttccaattcattaagaaacttttaacatgtaacagt
gtctacctgaatcctccacctggacaagatcatctattatcagaagctgaagaattggct
atgataagcattcaacttgctgcaagattcttgtttaatactgggtttcacacaaagaaa
atagtccgaggtccagcaagtgaatggtatgatgcattgtgtatcctgctccgtcacagc
aagaatgtacgctgttggtttgcacataatgttctttttgcctatccaaatcgcttctcg
gaataccttttggagtgccctagcactgaagtaagaagtgcgtttgctaagctcatagta
tttcttgcacatttttcattacaagatggaccatgcccttcaccatttacatccccagga
ccctccactcaggcttttgataatttaagtctcagtgatcaccttctcagagctgttctg
aatctactgcgacgagaagtatccgagcatgggaggcacttgacacagtacttcaatctc
tttgttatgtatgcaaatctgggtatggcagaaaagacacagttactgaaactaaatgtg
cctgcaacgtttatgctggtagctctggatgaaggcccaggaccaccgatcaaataccag
tatgctgaactaggaaaactttatgctgtggtatcacagttagtccgttgctgtgatgta
tcatcacgcatgcagtcctcaattaatggaaatccacccctgtcaaatccttatggtgat
cctaatttgtcccaacctataatgccaattcagcagagtgtggcagatatcctgtttgta
cgaactagttatgtgaaaaagattattgaagactgcagcaattctgaagagaccatcaaa
ctgctgcgcttttgttgctgggagaatccattgttttcttccactgtactgagtgaactt
ctctggcaggtggcgtattcttacacctatgaacttaggccctacttagatcttctttta
caaatcttgcttatagaagactcatggcaaacccacaggattcataatgccctaaaggga
attcctgatgatagagatgggctttttgacaccatccagcgatctaaaaaccattatcag
aagagagcatatcagtgtattaaatgcatggttgccctcttcagctcctgtcctgtagcc
taccagattctccagagtaatggggacttgaaacgaaagtggacctgggcagtggagtgg
ctcggtgatgagttggagcggaggccgtatgctgcaaatcctcagtatacctacaacaac
tggtcaccgcctgtacaaagtaatgaaacctcaaatggctacttccttgagagatcacac
agtgccaggatgactcttgcaaaagcatgtgaactgtgccctgaagaggaacaagatgat
caagatgcaccagaagatcatgattcatccccaccagaagatgctcctttatacccgcat
tctccaaactcccagtatcaacagcagaataaccatgtgcacggtcagccatacacgggt
ccggtggcacatcatatgaacaaccctcagcgaactggtcagcgagcacaagaaaattgg
gaaggcagtgaagacattcctgcatcacagacaaaagattaa
DBGET
integrated database retrieval system
