Leucoraja erinaceus (little skate): 129702834
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Entry
129702834 CDS
T09122
Symbol
sorcs2
Name
(RefSeq) VPS10 domain-containing receptor SorCS2 isoform X1
KO
K27082
VPS10 domain-containing receptor SorCS2
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
leri04131
]
129702834 (sorcs2)
Membrane trafficking [BR:
leri04131
]
Protein recycling
Others
Others
129702834 (sorcs2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
SorCS_stalk
PKD
PKD_4
BNR_6
DUF1444
Beta-prop_RSE1_1st
DUF4834
Motif
Other DBs
NCBI-GeneID:
129702834
NCBI-ProteinID:
XP_055500837
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All DBs
Position
1:complement(141764151..142501063)
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AA seq
1121 aa
AA seq
DB search
MAVAAVHKGSALSPAAAAAQTRSYLWLCICYGLLCLLPCALPRRSAGVRIARQLHGGGGG
GGEGAAPGPSREKKRSAPPQDAALLSTSFILRGDASHNQAMVHWTGENSSVILILTKLFH
SDMGKVLESSLWRSSDYGTTYVKLNLQPGTTNIITNFYICPANKKKIILVSSSMNDRDQS
LFMSTDEGANFQRQQIFFSVETLVFHPKEQDKLLVHSKEGRLYVSVDFGKKWELLQEQVT
KERFYWSVPGVDGDPDLIHMEIQDNSAGFLYITCQITNCSEKALKTPFFGNIDQNSLLVN
DDYIFVQATSGNKTKYFVSYRRDQFVQMKLPKYALPKDKQIISTDENQVFVAVKEWHQTD
TYNLYLSDTKGVYFTLALEDVRSTKQPEENVIIDIHEVQGVKGVFLANKKVDGKVKTYIT
YNKGRDWQLLTPPATDMNGKQTKCHLPECSVHLHLRWADNPYVSGTVHTKDSAPGLIMGA
GNLGAQLVEYKEDMYITSDCGNTWRQVFEEEHHILYLDHGGVIVAIKDTSIPLKILKFSV
DEGHTWTTHNFTSTSVFVDGLLSEPGDETLVMTIFGHISFRSDWELVKVDFRPSFHRHCL
PDDYDSWDLRNQEKQCIMGEQRRFRRRKISSWCIKGKNFTSALSSKPCQCTEFDFECDYG
FEQQANGRCVPAFWYNPESPSEDCKSGQSYTRSSGYRKVALNVCKGGLDKGQGSTQHLCP
LMAPRGLQIVTKGERLAVSPGDTVTFLISQNQGDTLNTKYQVDLGDGFKAIYENLTLMDE
PIQHGYENPGIYRVSVKAENSAGSDEAMVYIQVNTPLLAVHLEVLPVIRRNQQVNLTALL
QPSNSNLTVFQWWLGDSLEPRLTLENSLITSFPEDSEIKVTVQASCGSSMVQDSKVVRIF
DQLEVLPLEFSQNIDSYNPNVPEWREDIGQVISRILAETTGIPEELLLTVVRIGLPTTAE
LYLLPPPEKPKRKRNTTNEKGIDSLIEALTENQVKISLKPGVEVTVTLADYRAVTQKSFG
GKGVWVVVVMFVICLIVVGAFILHKLKRKIPGRNVYAQMHNEKEQEMTSPVNHSEDTQNI
IQGEEYIDDDLDSQTLGNGGGGHPAVVLSINSRETHNYLSS
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atggcagtggcggcagtacacaagggcagcgccctttccccggcagcggcggcagcccag
acacggagctacctgtggctctgcatatgctacgggctactttgcctgctgccctgcgct
ctgccccggcgctcggctggagtccggatcgcccggcaactgcacggcggcggcggcgga
ggcggcgagggagcagcccccgggccaagccgggagaagaagaggtccgctccgccgcag
gacgcggctctgctcagcacctcgttcatcctgcgaggagacgcttcgcacaaccaggcg
atggtgcactggacgggggagaacagcagcgtgatcctgattctcaccaagttgttccat
tcagatatgggaaaagttttggagagttctttatggaggtcatccgattatggaactacc
tacgtgaaactgaacctgcagcctggcaccaccaacataattaccaatttttatatctgc
cctgcaaataagaaaaagataattctcgtgagttcatcaatgaatgatcgtgatcagagc
ctcttcatgagcacagacgagggagccaattttcaacggcagcaaatcttcttctctgtg
gagaccttggtgtttcatccaaaagaacaagataagttgcttgtgcacagcaaggagggc
cggctatatgtttctgttgattttggaaagaaatgggagttgctgcaagaacaagtgaca
aaggaacgattttattggtctgtacccggggtcgatggtgatccagatttgattcacatg
gaaatacaggacaacagtgcaggttttctttatatcacctgccaaattacaaactgctcg
gagaaagctctcaaaacccctttctttggaaacatagaccagaactcactgctcgtcaat
gatgactacattttcgttcaggcaacctctggaaataagacaaaatattttgtctcttat
cggcgggaccagtttgttcagatgaagttacccaaatatgccttaccaaaggataagcag
atcatcagtacggacgagaatcaagtgttcgtggctgtcaaggaatggcatcagacggac
acctataacctctacctgtcggacacaaagggcgtgtacttcacgctcgctctggaggat
gtcaggagcaccaagcaaccagaagaaaatgttataatagatattcatgaggtacaagga
gttaaaggcgttttcttggcaaataagaaagtggacggtaaagtgaaaacgtacatcacc
tacaacaaaggtcgtgactggcaattattaactccaccagccactgacatgaatggcaag
caaaccaaatgtcatctgcctgaatgctccgtccacttgcacctgcgttgggctgataac
ccgtatgtatcgggcactgttcacaccaaagattccgcgccaggacttataatgggagca
ggaaacttgggtgcccagctggttgagtacaaggaagatatgtacataacctccgactgt
ggaaatacatggaggcaggtgtttgaggaagagcatcatattctctaccttgatcatggc
ggagttattgttgccatcaaggacacctcaatccccctgaagatactcaagttcagtgta
gacgaaggacatacttggacaacacacaattttaccagcacttccgtctttgtcgatgga
ctactgagtgaaccaggggatgaaacactggtcatgacgatcttcggtcacattagcttc
cgatcggattgggaactggtgaaagtggacttcagaccatcattccacagacactgctta
ccggatgactatgactcctgggacctgaggaaccaggagaagcaatgcatcatgggagag
cagagacggttccgcagacggaaaatatcatcctggtgtattaaaggaaagaacttcaca
tcagccctctcctccaaaccttgccagtgcacagaatttgattttgaatgtgattacgga
tttgagcagcaggccaatggcagatgtgtccctgcattttggtacaacccagagtcacct
tcagaggattgcaagtctggacagtcgtacaccagaagctctggttacaggaaggtggcc
ctcaacgtctgcaagggtggtttggacaaggggcaaggttccacgcagcacctgtgccca
ctgatggctcccagaggtctccagatagtcacgaaaggagagagattggcagtcagccct
ggtgacactgttaccttcttaatctcgcagaaccagggtgacacactgaacacaaagtat
caggtggatctcggggatggtttcaaggccatttatgagaacctcacactcatggatgag
ccaattcagcacggatacgagaacccaggaatctaccgcgtctctgtcaaagctgaaaac
tctgcagggtctgatgaagccatggtttacattcaggtcaacacgccactgttggccgtg
cacctggaggtactgccagtcatccgcagaaaccagcaagtgaacctgaccgcactgttg
cagcccagcaactccaacctcacagtctttcagtggtggctgggagacagtcttgagcct
cgtctcacactggaaaacagtctgataaccagctttcctgaggatagtgagattaaagtc
acagtccaggcttcctgtggtagctccatggttcaggactctaaagtggtgaggatattt
gatcagttggaagtcctaccccttgaattttctcagaacattgatagttacaatcctaat
gtaccagagtggagagaagatattggacaggttatatcaaggattttggcagagacaaca
ggcatccctgaggaactactgctgacagtggtaagaataggcttacccaccacggcagaa
ctgtacctgctcccgccaccagagaaaccaaagaggaaacggaacacaaccaatgagaag
ggaatcgattctttaatcgaagctctgacggaaaaccaagtaaaaatctctctaaaacct
ggagttgaagtgactgtcacattggcagattacagagcagttacccagaaaagctttgga
ggaaaaggcgtgtgggttgtcgtggtgatgtttgtgatctgcctgatcgtcgtcggagct
ttcatcttgcacaagttgaaaaggaagatacctgggcggaatgtttatgctcagatgcat
aatgaaaaagagcaggaaatgactagtcctgtcaaccacagtgaagacacacagaacatc
attcaaggggaagaatacatcgatgatgatttggattcacagacgctaggtaacggagga
ggtggtcaccctgctgtggttctcagcataaactcccgggaaacgcacaattatttgagt
agctga
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