Leucoraja erinacea (little skate): 129702925
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Entry
129702925 CDS
T09122
Symbol
chd1l
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1-like
KO
K20092
chromodomain-helicase-DNA-binding protein 1-like [EC:5.6.2.-]
Organism
leri
Leucoraja erinacea (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
leri03036
]
129702925 (chd1l)
Chromosome and associated proteins [BR:
leri03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
129702925 (chd1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
LIG3_BRCT
DEAD
BRCT
SWI2_SNF2
AAA_22
Motif
Other DBs
NCBI-GeneID:
129702925
NCBI-ProteinID:
XP_055500999
LinkDB
All DBs
Position
13:40788926..40846526
Genome browser
AA seq
1005 aa
AA seq
DB search
MSHFLQRLRQMSGPQVGESERFVEQDVRSWGLTGINLRSYQLNGLNWLVHCHTVQHGSIL
ADEMGLGKTCQSISFLLYLTGRQKEKGPFLILCPLSVLRNWTEELGGLAPRLSLVVYTGD
KDTRIASQRDLENCNFHALLTTYEICLKDASFLRRFNWSVLIVDEAHRLKNRNSLLYKTL
KAFSVRFTLLLTGTPVQNNLHELYSLLSFVEPKVFSEDDIEEFVNYYSSVEENTKQAKDL
HGLMQPFLLRRIKADVLSELPKKIDVVLYHGMSALQKKYYKAILMKDLDAFENEMGKKAR
LMNILIQLRKCVDHPYLFDGVEPEPFQIGDHLVEASGKLHLLDTLLAFLHPRGHRVLLFS
QMTRMLDILQDYMEYRGYSYERMDGSVRGEERFLAIKNFNQQDIFVFLLSTRAGGVGMNL
TAADTVIFVDSDFNPQNDLQAAARAHRIGQKRPVKIIRLIGRDTVEELIYNRAMSKLKLT
NTLIEGGQFSMNEGEESSGASGMQLSEILKFGLDKLLSSEESTIDDVNLQNILGETRKGM
WITQDQLVHKMESNEEQESTTNMYQYEGRDYSKESSSADQKTFEQLLELNKMVLEDSSKG
GRSLRTKSNLLPVLPLSISTRNKRILSPEELEQRLQKRQETAAKRAKLQEEKKQKREEEE
QKKKMAWWHSSGYKSLCLPSLDSGSEDDSDEDEGDLPGDLDSANTDQTSIHYVLGDVTHP
SAADNGDAIIVHCVDDSGRWGNGGLFTALEARSDEPMKQYGKAGKMKDLFLGSVLLFPID
DKESRNTGQDLLALIVTQQRDRCKVISGIKLTALEEGLKKLHTAAKKRNASVHLPRIGHA
TKGFNWYGTERLIRKYLASRGIATYIYYFKRHQATVSTSGSPGSTIKASANNDKGNKNTT
EQSAGNSSTLPDFMTGVNVYFFNISEEKMLSRYLITYNGNVDRSFGVGTTHIVAQVDNSN
QVQELQSCLQENCKAVVVQVQWLKVCFSKQQKVDTFMYEIKLKDF
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atgtcccactttctgcaacgccttcgccaaatgtccggcccgcaggtgggagagagtgag
cggtttgtggagcaggatgttaggagctgggggttgacaggtataaatctccgttcatat
caactgaatggcctaaattggcttgttcattgtcacactgttcaacatggcagcatcctt
gcagatgagatgggtcttggtaaaacgtgtcagtcaatatcttttctcctctacctaact
ggaagacaaaaggagaaaggccctttcctgatcctgtgtccgttgtcagtactaaggaat
tggacagaagagttgggaggacttgctccacgactttcattagttgtgtacactggagac
aaagatacaagaatagcgtctcaacgagacctggaaaattgcaattttcatgcactcctc
accacctatgagatttgcctaaaagatgcttcttttctgagaagattcaactggagtgta
ctgattgtggatgaggcacataggttaaagaaccggaactctctattgtataagactctg
aaagcgttttcagtacgattcacacttttactaactggaacaccagtgcagaataatctt
cacgaactgtactcactgctgagctttgtggaaccaaaggtcttctcagaagatgatatt
gaagaatttgttaattattacagcagtgtggaagagaacacaaaacaagccaaagatctg
catggtctaatgcaaccattcctcctcagaagaattaaggctgatgttctctctgaacta
ccaaaaaagatagatgttgtcttgtatcatgggatgtctgcactgcagaaaaagtactat
aaagccatactgatgaaggacttggatgcatttgagaatgaaatgggcaagaaagcgcga
ttaatgaatattctaatccaacttagaaaatgtgttgatcatccttatctttttgatggt
gtggaaccagaaccatttcagattggcgatcaccttgtcgaagcgagtggtaaacttcat
ctactggacactttactggcatttctgcatcccagaggtcatcgagtgttgctgttttcc
cagatgacaagaatgctggatatcctgcaggactacatggaatatagaggttatagctat
gaacgcatggatggatccgtacgtggagaagaacgattcttagcaatcaaaaacttcaat
caacaagatatatttgtttttcttttaagcaccagggcaggtggagtaggaatgaacctt
actgctgctgacactgtcatatttgtagacagtgattttaatccacaaaatgaccttcag
gcagctgcaagggcccacaggattggtcagaaaagaccagttaaaattattcgtctgatt
ggaagagacacagttgaagaattgatatacaaccgggctatgtcaaagttaaagttgact
aatacgttgattgaaggtggtcagttctcaatgaacgaaggagaagaatcatctggagct
tctggtatgcagctaagtgaaatcctgaaatttgggctggataagctgttgtcttctgaa
gaaagtaccattgacgatgttaatctacaaaatattcttggagaaaccagaaagggaatg
tggatcacacaggaccaactggttcacaaaatggagtcaaatgaagagcaagagagtaca
acaaatatgtaccagtatgaggggagagattactctaaagaatccagttcagcagatcag
aagacgtttgaacagcttctggaacttaacaaaatggtacttgaagactccagtaaagga
ggaagatcacttcgcacaaagtccaatcttcttccggttcttcctttgagtatatccacc
agaaataaacgaatattgtctcctgaagagcttgagcaacggcttcagaaacgtcaagaa
acagcagctaagcgagcaaaactacaggaagaaaagaaacaaaaacgagaagaggaggag
caaaagaaaaagatggcttggtggcattccagtggctacaaatcactatgtcttccatca
ttggatagtggaagcgaggatgattcagatgaagatgaaggtgaccttcctggtgatctg
gattctgccaatacagaccagacatccattcattatgtccttggagatgtcactcaccct
tcagctgctgacaatggggatgccataatagtgcactgtgttgatgactctggaagatgg
ggaaatggaggattgtttacagcgttggaagctcgatctgatgagccgatgaagcagtat
gggaaagcagggaaaatgaaagatcttttcctgggtagtgttctattatttcccattgat
gacaaggaatcacgaaatactggtcaagacttgttggcattgatagttactcagcaaaga
gaccgctgcaaggttatctctggtatcaaactgacggctttggaagaaggactgaagaag
ctccatacagctgccaagaaaagaaatgcaagtgttcacctaccacgcataggacatgca
accaaaggtttcaactggtatggcacagaaagactgattcggaaatacctcgcatcacga
gggatagcaacatacatctattatttcaaaagacatcaggccactgtatctacttctgga
tctccgggctctaccatcaaagcatcagcaaacaatgataaaggaaacaaaaatacgaca
gagcaatcagcaggaaattcaagcactctgccagatttcatgactggagtgaatgtgtac
tttttcaatatatctgaagagaagatgctaagccgttatttgattacttataatggtaat
gtggatcgcagttttggtgttggaaccacccatattgtggcacaagtggacaattccaac
caagtgcaggaattgcaaagctgtctacaagagaattgcaaagcagtcgtggtccaagtg
caatggctgaaagtttgtttctcaaagcaacagaaagttgacacttttatgtatgaaata
aaacttaaagatttttaa
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