Leucoraja erinaceus (little skate): 129702954
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Entry
129702954 CDS
T09122
Symbol
lrrtm1
Name
(RefSeq) leucine-rich repeat transmembrane neuronal protein 1
KO
K16665
leucine-rich repeat transmembrane neuronal protein 1/2
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
129702954 (lrrtm1)
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRR_9
LRR_6
LRR_14
LRR_LRWD1
LRR_NXF1-5
HemY_N
Motif
Other DBs
NCBI-GeneID:
129702954
NCBI-ProteinID:
XP_055501080
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Position
1:complement(4317551..4320664)
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AA seq
525 aa
AA seq
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MDFLLVGLSLHWLLKKPSASVVCVLGALLEMLPAADSVCAQQCRCDGKLVYCESQSLGEM
PHNLSGVQGLSLRYNSLSELHDDQFAGLLQLTWLYLDHNHIYSVDPNAFRGLRRLKELVL
SSNKITQLPNATFRPMPNLRHVHLSYNNLQSLEPDLFHGLRKLQTLHLRSNALKTIPVRI
FQDCRSLEFLDVGYNQLQSLARNAFAGLLKLTELHLEHNDLVKVNFAHFPRLLSLRTLYM
QWNKVIIVVNSLDWTWNHLEKLDLSGNEIEFIESYAFDVVPNLKILQLDSNRLTSIEQAI
LDSWKSLSSISLSGNSWECNRNICALATWLSNFKGHHEGSLLCASPVHTQGEEVLDAVHG
FHICDDPATGTATESGVTLVAGTDQGVTVIRDASSMYATQDTTGVRTTELISATGVLSHD
QQENTIHVHKVITGTMALLFSFLIVVLVLYVSWKCFPAGLRHLRQCFVTQRRKQKQQQTM
HQMAAMSTQEYYVDYKPNHIEGALVIINDYGSCSCHQQPARECEV
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggatttccttcttgtgggtctcagtctacactggctcctgaaaaagccttcagcgtcg
gttgtgtgtgtgttgggcgccctgctggaaatgttacccgccgctgacagtgtctgtgcc
cagcagtgccgctgcgatgggaagctggtgtattgtgagtcgcagagcctgggcgagatg
ccgcacaacctgtctggagtacagggtctgtcgctccgatacaacagcctgtccgaactg
cacgatgaccagttcgccggcttgctgcagctcacgtggctctacctcgaccacaaccac
atctactcggtggaccccaatgccttccgaggtctgcgccggctcaaggagctggtgctc
agctccaacaagatcacccagctgcccaacgccacgttcagacccatgccgaacctgcgg
catgtgcacctgtcctacaacaacctgcagagcctggaacccgacctgttccacggactg
cgcaagctgcaaacgttgcatttgaggtccaatgcactcaagacaatcccggtccgaatc
ttccaggactgccggagcctggagtttctggacgtcggatataatcagttgcaaagcctg
gcgcggaatgctttcgccggcctgttgaaactgactgaactccacttggagcacaatgac
ttggtgaaagtaaactttgctcactttccacggctgctatctctgagaaccctctacatg
cagtggaataaagtcatcattgtggtgaactccttggattggacttggaaccatctagaa
aaactggacctctccggaaatgagattgagtttattgaatcttatgcctttgacgttgtg
cctaacctgaagatacttcagttggattcgaaccgtctgaccagcatcgagcaggcaatt
ctggactcctggaaatccctctctagcatcagcctttctgggaacagctgggagtgcaat
cggaatatatgtgctttggccacctggctgagcaattttaaagggcatcacgaaggcagc
ttgttgtgtgccagccctgtccacacccagggcgaggaggtactcgacgccgtgcatggc
tttcacatatgtgacgatccggccacgggcacggcgacagagtcaggcgtgaccctggtg
gcgggcacagaccagggtgtgacagtaatcagagatgcttccagcatgtacgccacgcag
gacacaacgggagtgagaaccacggagttgatcagtgccaccggcgtgctttctcacgac
cagcaggaaaataccattcacgttcacaaagtgatcacgggcaccatggcgctcctcttc
tcctttctgatcgtggtgctggtgctgtacgtctcgtggaagtgtttccccgctggcctg
aggcacttgaggcagtgctttgtgacacagcgccgcaagcagaaacagcaacaaactatg
catcagatggccgccatgtccacacaggagtactacgtggactataaacccaatcacatc
gagggcgctctggttatcattaatgattacggatcctgttcttgtcatcaacagccagcc
agggaatgtgaagtctga
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