Leucoraja erinaceus (little skate): 129702976
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Entry
129702976 CDS
T09122
Symbol
runx1
Name
(RefSeq) runt-related transcription factor 1 isoform X1
KO
K08367
runt-related transcription factor 1
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
129702976 (runx1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
leri03000
]
129702976 (runx1)
Transcription factors [BR:
leri03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Runt
129702976 (runx1)
BRITE hierarchy
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GFIT
Motif
Pfam:
Runt
RunxI
TagH_SH3-like
Motif
Other DBs
NCBI-GeneID:
129702976
NCBI-ProteinID:
XP_055501076
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All DBs
Position
13:44562441..44733956
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AA seq
482 aa
AA seq
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MASNSIFESFPSYQQCFMRDTNTSRRFTPPSTTLSTAKMSDPLPLAPPDSVLGKLRPADR
SMVDVLADHPGELVRTDSPNFLCSVLPTHWRCNKTLPIAFKVVSLGDVPDGTLVTVLAGN
DENYSAELRNATAVMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYHRAIKIT
VDGPREPRIRRNVFLCPAGHRQKLEEQSKSAGLAFSERLSELEQLRRSGMRLSPHHPTTA
PNPRPSLNPTAVFNPQAQTQMQDTRHIQPSPPWTYDQSYPYLGQISTPSVHPATPISPGR
ASGMPTITAEISSRLSGASDLTAFGDPRMGIDRQFSALPPLSDGRFPDPRMHYPGAFAYT
PTPVTTGIGIGMSAMTTAARYHTYLPPPYPGSAQGQAGPFQTSTSPYHLYYGTSTGSYQF
SMMTGGERSPPRILPACTNASTGSSLLNPNLPSQSDADGSHSNSPTNISTTGRLEETVWR
PY
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgaacagcatatttgagtcatttccttcatatcaacagtgcttcatgagagat
accaacaccagccgccggttcacgccgccttccaccacgctcagcacggcgaagatgagc
gaccctctcccgctggcgccgccggacagcgttctcggcaaactgaggccggccgatcgc
agcatggtcgacgtgttagccgatcatccaggagagctggtgcggaccgacagtccaaac
ttcctctgctccgtcctacccacgcactggagatgtaacaagacccttcctatcgcattt
aaggtggtttccctgggagacgttcccgacgggactctggtcacggtcctggccggcaac
gacgagaactactcggcagagctgcgcaacgccacggctgtcatgaagaaccaggtcgcc
cgtttcaacgatctgcgattcgtcggccggagtggacgagggaagagctttacgttgacc
atcaccgtgttcacaaaccctcctcaagtcgccacttaccaccgggctatcaagatcacc
gtggacgggcccagagagcccagaataagacggaatgttttcctgtgtcctgcaggacat
agacagaagttggaagagcagagtaagagtgctggcctggccttctcagaacggctcagt
gaattagagcagctacgtcgctcgggcatgaggctcagccctcatcaccccactaccgct
cccaacccacggccctcactcaaccccaccgccgtctttaaccctcaggcacagacccaa
atgcaagatacaaggcacatccagccatcaccgccatggacctacgaccagtcctaccct
tatctcggccagatatcaacaccctctgttcaccctgcaactcccatctcccccggccgg
gcaagcggcatgccgacaatcacagcagaaatttccagcaggctttcaggggcgtcggat
ctcacggcatttggggacccaagaatggggatcgaccgccagttctcggctctcccaccc
ctctccgatggccgctttccagatccccgaatgcactacccgggggcttttgcctacacg
cctactccggtgaccaccgggataggaatcggcatgtcagccatgacgaccgcggcgcgc
tatcacacctacctgcctcccccatacccgggctccgcccagggccaggccgggcccttc
cagacaagcacctctccctatcatctctactacggcacctccaccggctcctaccagttc
tccatgatgaccggcggagagaggtcgcctccacgcatattgcccgcctgcactaacgcc
tccacgggatccagcctcctcaacccaaacctacccagtcaaagcgacgcggatggaagc
cacagcaattcaccaacaaacatcagcaccacggggcggctagaagaaaccgtgtggaga
ccttactaa
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integrated database retrieval system
