Leucoraja erinaceus (little skate): 129703041
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Entry
129703041 CDS
T09122
Name
(RefSeq) amyloid-beta precursor protein-like isoform X1
KO
K04520
amyloid beta A4 protein
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
129703041
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
leri01002
]
129703041
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
leri00535
]
129703041
00536 Glycosaminoglycan binding proteins [BR:
leri00536
]
129703041
Peptidases and inhibitors [BR:
leri01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
129703041
Proteoglycans [BR:
leri00535
]
Cell surface proteoglycans
Others
129703041
Glycosaminoglycan binding proteins [BR:
leri00536
]
Heparan sulfate / Heparin
Others
129703041
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
APP_E2
APP_N
APP_amyloid
APP_Cu_bd
Beta-APP
Kunitz_BPTI
Baculo_gp41
Spore_III_AB
Insulin_TMD
Metal_resist
Prominin
Motif
Other DBs
NCBI-GeneID:
129703041
NCBI-ProteinID:
XP_055501199
LinkDB
All DBs
Position
13:complement(51898970..52061860)
Genome browser
AA seq
793 aa
AA seq
DB search
MIMMMMMKMVLMPAALALLVLAPLCPALEVPTDGSAGLLATEPQIAMFCGKLNMHVNVQT
GKWVSDPSGMNSCFGTKEGILRYCQEVYPDLQITNVVEANQPATIQNWCKKGRKQCKGHP
HIVVPYRCLVGEFVSDALLVPDKCKFLHREKMDTCESHLYWHTVAKETCGDKIMNLHDYG
MLLPCGIDEFRGVEFVCCPFPEENDKVDSDIDVEDSDVWWGGDDADYADGGDKIVEEQPI
EEEEDSDIDDDDDDDEDDDDLDEVEDQYEDPTEHTTSSTTTTTEAIEEVVRDLEVKGKPA
SDLTLVTWNLVISIKKASKGFKRLQKAAAAKVCSEQAETGPCHSMMPRWYFDISEGKCAQ
FLYGGCGGNRNNFDSEEYCLSVCNSIIPTTAASTPDAVDKYLETPGDENEHAYFQKAKER
LEAKHRERMSKIMREWEEAEHQAKNLPKADKKAVIQRFQEMVESLEQEAASERQQLVETH
MARVEAMLNDRRRIALENYLAALQADPPRPRHVLNALKKYSRAEQKDRQHTLKHFDHVRV
VDPEKAAQIKSQVMTHLHVIDERMNQSLSLLYKVPSVAEEIQDEVDELLQKERSYMDDMM
ANSVSDTRISYGNDALVPSLSETKTTIELLANDGEFSMDDLQPQHPFVIDSIPANTENEV
EPVDARPVPDRGLTTRPGSGLTGIKMEEIAEVKMETEFRQDSGYEVHHQKLVFFPEDVGS
NKGAIIGLMVGGVVIATVIVITLVMLKKKQYTSIHHGVVEVDAAVTPEERHLSKMQQNGY
ENPTYKFFEQMQN
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgataatgatgatgatgatgaagatggtgctgatgccggcggctctcgccctcctcgtc
ctcgccccgctctgcccggctctggaggttccaactgatggaagcgctggattgttggca
acggaaccccaaattgccatgttctgtggcaagctgaacatgcacgtcaatgtacagacc
ggcaagtgggtttctgatccctccggaatgaacagctgctttggcacaaaagaaggaata
ttgcgatactgtcaagaggtttatccagacttgcagatcaccaatgttgtcgaggctaac
caacccgccaccatccagaactggtgcaagaaaggccggaagcaatgtaaaggccaccct
catattgtggttccttacagatgtttggttggtgaattcgtaagtgatgccctccttgtt
ccagacaagtgcaaattcctgcaccgggagaagatggacacctgtgagagccatctgtat
tggcacactgtcgcaaaggagacgtgtggtgacaagatcatgaacctccacgactacggg
atgctgctgccctgcggcattgacgagtttcgaggagtagaatttgtttgctgccccttc
ccagaagaaaacgataaggttgactcggacattgatgtggaagattcagacgtctggtgg
ggaggagatgatgcagattatgccgatggcggtgacaagattgtggaagaacaacctata
gaggaggaagaggatagcgatattgatgatgatgatgatgatgatgaagacgacgatgac
cttgatgaagtcgaggatcagtatgaggatcctaccgagcatacgaccagcagcaccacc
accaccacagaggcaattgaagaagttgtgagagatctcgaggtcaaaggtaaacctgca
tctgacttgaccctggtaacctggaatcttgtcatttcaataaaaaaggcttcaaaaggc
ttcaaacggcttcaaaaggcagctgcagcaaaagtttgttctgagcaagcggaaactggg
ccttgtcattccatgatgcctcgatggtactttgacatcagtgaaggaaagtgtgcccag
ttcttgtacggaggctgcggaggaaacagaaacaattttgactccgaagagtactgtttg
tccgtctgtaacagcatcatccccacaacagccgccagcactcccgatgctgttgacaaa
tatctcgaaacacccggtgatgagaacgagcatgcttactttcagaaggccaaggagagg
ttggaagccaagcatcgagaacgcatgtcaaagataatgagggaatgggaagaagctgaa
caccaagctaagaacctgcccaaagccgacaaaaaagctgtcattcagcgtttccaggag
atggtggaatcgctggagcaggaggcagcgagtgagaggcagcagttggtggagacccac
atggcgagagtggaggccatgctgaatgacagacgtcgcatcgcgctggagaattacctt
gccgcactccaggcagacccaccacggccccgacatgttctgaatgcattgaagaaatat
agccgtgctgaacaaaaagacaggcagcacaccctgaagcactttgaccatgtccgcgtg
gttgatcccgagaaggcggctcagatcaaatctcaagtaatgactcacctgcatgtcatt
gatgagcgcatgaaccaaagcctctccctgctctacaaagttccttcagttgcagaagag
attcaggatgaagttgatgagctgctgcagaaggagaggagctacatggacgacatgatg
gcaaactccgtcagcgacacacgcatcagctacggcaacgacgcgctggtcccttccctc
tccgagaccaagacaaccatcgagctccttgcaaatgacggggagttcagcatggacgac
cttcagcctcagcacccatttgtcattgactccatccctgccaacacggagaacgaagtt
gaaccagtggatgcacggccagttccagaccgagggcttaccactcgaccagggtctgga
ctcaccgggattaagatggaggaaatcgctgaagtgaagatggaaactgaattccgtcag
gactctgggtatgaggtgcaccatcagaagctggtgtttttcccagaggatgttggatca
aataaaggagctatcattggtctcatggttggaggcgtcgtcatagcgactgtgattgtc
atcactctggtgatgctcaaaaagaagcagtacacatctatccatcacggggtggttgag
gtcgatgctgccgtgactcctgaggagcgccacctctcaaagatgcagcagaacggctac
gaaaaccccacctacaagttcttcgaacagatgcaaaactaa
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