Leucoraja erinaceus (little skate): 129703089
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Entry
129703089 CDS
T09122
Symbol
u2af1
Name
(RefSeq) splicing factor U2AF 35 kDa subunit
KO
K12836
splicing factor U2AF 35 kDa subunit
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129703089 (u2af1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
leri03041
]
129703089 (u2af1)
Spliceosome [BR:
leri03041
]
Complex A
U2 snRNP components
U2 related factors
129703089 (u2af1)
Complex B
129703089 (u2af1)
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Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
RRM_1
Torus
zf_CCCH_4
Nup35_RRM_2
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
129703089
NCBI-ProteinID:
XP_055501262
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All DBs
Position
13:complement(54976360..55013934)
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AA seq
258 aa
AA seq
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MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNLYRNPQNCTQ
TADGFHCAVGDVEMQEHYDEFFEEVFTEMEEKYGEIEEMNVCDNLGDHLVGNVYVKFRHE
EDAEKAVNDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE
LRRELYGRRRKSQQQGSRVTSSGDKVTPKHAGAAGRHRSRSRSRERKRSRSRERGGRGGR
DRDRDRRRSKDRERSGRF
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atggcggagtacctggcgtccatcttcggcaccgagaaggacaaggtcaactgttcattc
tattttaaaatcggagcgtgtcgtcatggagaccgatgttctcgtttgcacaacaagccc
acattcagtcagaccattgcgctcttgaacttataccgtaaccctcaaaactgtacccag
acagcagacggtttccactgtgctgtcggtgatgttgaaatgcaggaacattatgatgag
ttctttgaggaggtgttcacagaaatggaagaaaagtatggtgaaattgaagagatgaat
gtctgtgataatttgggtgatcacctggttggaaatgtttatgtaaagtttcgccatgaa
gaagatgcagaaaaggctgtaaatgatctaaacaatcgctggtttaatggacagcctatc
catgcagagctatctcctgtgactgactttagagaagcttgctgcagacaatatgaaatg
ggagagtgtacccggggaggtttctgcaacttcatgcatctgaagccgatatcgcgggag
ttacgccgtgagctgtatggacggcgccgcaagagccagcagcagggtagccgtgtcacc
tcatctggggacaaagtcaccccaaaacatgcaggtgcagcaggcagacacaggtcaaga
tcgagatctcgtgagcgcaagaggtccaggtcacgggagcgtggaggtcgtggtgggagg
gaccgagaccgggaccgcagacgttccaaggatcgtgaacgatctgggaggttctga
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