Leucoraja erinaceus (little skate): 129703165
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Entry
129703165 CDS
T09122
Symbol
smc4
Name
(RefSeq) structural maintenance of chromosomes protein 4
KO
K06675
structural maintenance of chromosome 4
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
leri03036
]
129703165 (smc4)
Chromosome and associated proteins [BR:
leri03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
129703165 (smc4)
Condensin II
129703165 (smc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
THOC7
AAA_29
USHBP1_PDZ-bd
ATG16
FliJ
CCDC39
DUF948
ABC_tran
Motif
Other DBs
NCBI-GeneID:
129703165
NCBI-ProteinID:
XP_055501307
LinkDB
All DBs
Position
14:complement(47635567..>47668990)
Genome browser
AA seq
1400 aa
AA seq
DB search
RTRPLPGNSNRKKKNPNACDFFFCIILFFKKNKSRFIYFSLAGRAEGADLSDFEFVFLKV
GIGPIYSNRLTHNALSPNEFQSSLVFGAIFDWDRAIYSLGYTMPAKLKYSTAKQNAKLAP
EGPEPLDASDNGMDIQQKATTSNVDEVRIDAVLDAAVEPINNQSLEEILAGISPPPPPAM
TNEPGAPRLMITHIVNQNFKSYAQEQILGPFHKRFSCIIGPNGSGKSNVIDSMLFVFGYR
AQKIRSKKLSVLIHHSDEHKDIQSCTVEVHFQKIIDKEGDDFEVIPNSKFYVSRTAYKDN
SSVYHINGKKSTFKDVGILLRSHGIDLDHNRFLILQGEVEQIAMMKPKGQNQHDEGMLEY
LEDIIGSERLKEPIQILCRRVEILNEQRGEKLNRVKIVEKEKDALEGEKNHALEFLALEN
EIVKKKNCVLRYYIHEVQRGIADMGEQKQKIHEDTQDTRDKSAKLEGDIKVKINALKQFE
KKMGKITTYIEEKKGKFAEFDLQDVKVQEKLKHSKSKEKKLQKQLQKDAEKLDDLKNVPS
DSENVIREATVGKEKLEQNKINEEEKLRKVMESLKQETRGLQEEKEVNEKELMELSKAVN
GARSKMDVAQSELDIYLSRHKSALGQLNQAKETLTTTTSTLKERKTAIKELETKIPQNQQ
ELHKDEKELEKLIHSDAQIRNTVYELRQKVEEAKSSLTVNRSRGRVLEALMQQKNTGKIL
GIHGRLGDLGAIDEKYDVAISSCCGALDNIVVDTIDKAQECVNFLKKQNIGVATFIALDK
MKVWERSIDKIKTPENIPRLFDLVKINNETIRPAFYFALRDTLVANDLEQATRVAFQKDK
RWRVVTLQGQIIEQSGTMTGGGRKIMKGRMGSSLVVETTPEEMEKMEAKLQKDLAMAQKY
QEQKGHLEEKVVKMRQSIREMKNTLEKYTASIQGLTEQEAHLTIQVKDFEANVIAVVPDQ
NKQKQLQKTLDTYKKEYEKAAAKAGKIEAEVKRLHELIVEINNKKLKAQQDKLDKINKEI
DDCSSSITKAQVAIKTAGRNFKKAEESVKRIGEEIEENKKEIEDLTKELKRLEEEGAIVL
KESTEAQEHLTTVTDERNCLLQELKAIQEEQQALQKETLNIRLKLEQIDGHIAEHQSKIK
FWQKEISKLSLHPSDKPAEELKELSEMDLQVINNPDVINNQIALLEAKCLDMKPNLGSIA
AYKKKEELYLQRVGELDEITDQRDKFRRAFEDLRKQRLNEFMAGFNMITNKLKENYQMLT
LGGDAELELVDSLDPFSEGILFSVRPPKKSWKKIFNISGGEKTLSSLALVFALHHYKPTP
LYFMDEIDAALDFRNVSIVAHYIYEQTRNAQFIIISLRNNMFEIADRLVGIYKTHNTTKS
VATNPKIIGLQALPEVMGTA
NT seq
4203 nt
NT seq
+upstream
nt +downstream
nt
cgcacacggccgctgcctggcaacagcaaccgaaaaaaaaaaaacccaaacgcgtgtgac
ttttttttttgtataatattattttttaaaaaaaacaaaagccggtttatatatttttca
ctggcgggcagagctgaaggcgcggatctgtcggattttgaatttgtttttttaaaagtt
ggcatcggccccatttattcaaaccggcttacccacaatgctttgtcccccaacgaattt
cagtcaagtttagttttcggcgccattttcgactgggaccgagcaatttatagtctaggt
tataccatgcctgccaaattgaaatattccacagcaaagcaaaacgcaaaacttgctccg
gagggaccagagcccttggatgcgtctgacaacggaatggatatccaacaaaaggcaacc
acatcaaatgtagatgaagttagaatagatgctgtcttagacgctgcagttgaaccaata
aataatcaaagcctggaagaaattttagctggcatttctcctcctccacccccagcaatg
accaatgaacctggagctcctcgtctcatgattacacatatagtgaatcaaaatttcaaa
tcgtatgctcaagaacaaattctgggtccttttcacaagagattttcttgtattattgga
ccaaatgggagtgggaaatcaaatgtgattgattcaatgctgtttgtttttgggtacagg
gcccaaaaaattcgctccaaaaaattgtctgtactcattcaccattccgatgaacacaaa
gacattcagagctgtactgttgaagttcactttcaaaagatcatagataaggagggtgat
gattttgaagttattccaaatagcaaattctacgtctcaagaactgcctacaaggacaat
tcttctgtttaccatattaatggaaagaaatcgacatttaaagatgtaggaatattgctt
cgcagtcatggaatcgatctggatcacaacagatttttgattcttcagggtgaagtggag
caaattgccatgatgaagccaaaaggtcaaaatcagcacgatgaaggtatgctagaatat
ctggaagatataattggatcagagcgactcaaagagccaattcagatactttgtcgcaga
gttgagattttgaatgaacagagaggagaaaagcttaatagggtgaagattgtggaaaaa
gaaaaggatgctttggaaggagaaaaaaatcatgcacttgagtttcttgcattggaaaat
gaaattgtcaagaagaagaattgtgtcttgcgttattatatccatgaagtgcagagagga
attgctgatatgggggaacagaagcaaaaaattcatgaagatacgcaggatacacgtgat
aaaagtgccaaacttgagggggatataaaagtcaaaattaatgctttgaagcaatttgaa
aaaaaaatgggtaaaattaccacgtacattgaggagaaaaagggaaagtttgcagagttt
gatttgcaagatgtgaaagtccaagaaaaattgaagcattcaaaaagtaaagagaagaaa
ttgcagaaacaactacagaaagatgcagagaagttggatgatttgaaaaatgtacccagt
gatagtgaaaatgtcatcagagaagcaacagttggaaaagaaaagcttgaacagaataaa
ataaatgaagaagaaaagctgaggaaagtaatggagagtctcaaacaagaaacgcgagga
ttacaggaagaaaaagaggtgaatgaaaaggagctcatggagttgagtaaagcggtaaat
ggggctcgatcaaagatggatgtagctcagtcggagctggatatctacctcagtcgccat
aaatctgctttgggccaactcaatcaggccaaggaaaccctaacgaccactactagtaca
cttaaagaaagaaaaacagcaattaaagaattggaaaccaaaataccacagaatcaacag
gaattgcataaggatgaaaaggaacttgaaaaattaattcattctgatgctcagatccgg
aatactgtttatgagctccgacaaaaggttgaagaagcaaaaagctcgttaacagtaaat
cgcagtcggggcagagtcttggaggctctaatgcagcaaaagaacactggtaaaatcctc
ggaatccatggaagattgggtgatctgggtgccattgatgaaaaatacgacgttgcgatc
tcctcctgttgtggtgccttggataacattgttgtcgacacaattgataaggcccaagag
tgtgttaatttcctgaaaaaacaaaatattggagttgcaacttttattgctttggataag
atgaaagtttgggaacgaagtattgataaaatcaagactccagaaaacattccccgtctg
tttgatttagttaaaatcaacaatgaaactatacgtccagcattttactttgcacttcgt
gacacacttgttgctaacgacctagagcaagcaacacgtgttgcattccagaaggacaag
cgttggagagtggtaacactgcagggacagataatagagcagtcaggtaccatgacaggt
ggagggagaaaaataatgaagggaagaatgggatcttcattagtcgttgaaactacacca
gaggagatggaaaaaatggaggctaaattgcaaaaggacttggcaatggcacagaaatac
caagaacagaaaggtcatttggaggaaaaggtggtaaaaatgcgacagagcatcagggag
atgaaaaatacattggaaaaatacacagcaagtattcaggggctgactgaacaggaagct
cacttgacaattcaggtgaaggactttgaagcaaatgtgatcgcagtcgtccctgatcag
aataaacagaaacagctacagaagacactggatacgtacaagaaagagtacgagaaggct
gcagcaaaggctggaaaaattgaagcagaggtgaaacgattgcatgaacttattgttgaa
atcaataataaaaaacttaaagcccaacaggataaactggataaaattaacaaagaaata
gatgattgttcctcttccattacaaaagcacaagttgctataaaaactgcaggaagaaat
tttaaaaaagcagaagaatcggtgaagcgaatcggagaagaaattgaagagaacaaaaaa
gagattgaagatctaacaaaagaactgaaaagattggaggaagagggtgctattgtgctc
aaagaaagcactgaagcccaggaacatttaacaactgtaactgacgaacgtaattgttta
ctgcaagaacttaaggcaattcaggaagaacaacaggcacttcagaaagaaactcttaac
attcgtctaaagttggaacagatagacgggcatattgcagaacaccaatctaaaattaaa
ttctggcagaaagagatatcaaagctttctttacatccatctgacaaaccagcagaagaa
cttaaagaattaagtgagatggatctgcaagtaattaacaatccagatgtgatcaataat
cagattgcacttctggaagctaagtgcctcgatatgaagccaaacctgggttcaattgct
gcatacaagaagaaagaagagctctacctgcagcgtgtgggcgagttggatgaaattact
gatcagcgtgataaattcagacgtgcctttgaagacttgaggaagcagcgtctaaatgaa
tttatggctggctttaatatgatcaccaataagttgaaggagaattaccaaatgcttaca
ctaggtggagatgctgaactggagttggttgacagtctagacccattttctgaaggaatt
ctgttcagtgtgcgtccaccaaagaaaagctggaaaaagattttcaatatttctggtgga
gagaagactctcagttctctggctctagtttttgcacttcatcattacaagcctactcca
ttatacttcatggatgagattgatgcagcgctggatttcagaaatgtttcaattgttgca
cattatatttatgaacagaccaggaatgcccagtttatcatcatttctttaaggaacaat
atgtttgaaattgctgataggttggttggaatctacaagacccacaacacaacgaagagt
gttgcaactaatcctaaaatcattggtcttcaagcacttcccgaagtaatgggcacagct
taa
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