Leucoraja erinaceus (little skate): 129703294
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Entry
129703294 CDS
T09122
Symbol
rfc4
Name
(RefSeq) replication factor C subunit 4 isoform X1
KO
K10755
replication factor C subunit 2/4
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri03030
DNA replication
leri03410
Base excision repair
leri03420
Nucleotide excision repair
leri03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
129703294 (rfc4)
03410 Base excision repair
129703294 (rfc4)
03420 Nucleotide excision repair
129703294 (rfc4)
03430 Mismatch repair
129703294 (rfc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
leri03032
]
129703294 (rfc4)
03036 Chromosome and associated proteins [BR:
leri03036
]
129703294 (rfc4)
03400 DNA repair and recombination proteins [BR:
leri03400
]
129703294 (rfc4)
DNA replication proteins [BR:
leri03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
129703294 (rfc4)
DNA Replication Termination Factors
ELG1-RFC complex
129703294 (rfc4)
Chromosome and associated proteins [BR:
leri03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
129703294 (rfc4)
DNA repair and recombination proteins [BR:
leri03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
129703294 (rfc4)
Check point factors
HRAD17(Rad24)-RFC complex
129703294 (rfc4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
AAA_lid_RFC1
AAA_assoc_2
AAA_16
AAA_22
AAA_30
Mg_chelatase
AAA_11
DUF815
SLFN-g3_helicase
AAA_24
AAA_14
AAA_19
RuvB_N
AAA_28
nSTAND_NTPase5
ResIII
AAA_5
AAA_7
DNAX_ATPase_lid
Motif
Other DBs
NCBI-GeneID:
129703294
NCBI-ProteinID:
XP_055501619
LinkDB
All DBs
Position
14:complement(13602851..13624178)
Genome browser
AA seq
360 aa
AA seq
DB search
MQAFLKGAGAIGTKATREKTAPGTSGENKKQKPIPWVEKYRPKCVAEIAFQEEVVAVLKK
TIEGADLPNLLFYGPPGTGKTSTILAAARELFGPELYRKRVLELNASDERGIQVVREKVK
TFAKLAVAGSRLDGKPAPPFKIIILDEADSMTNAAQAALRRTMERESKTTRFCLICNYIS
RIIEPLTSRCSKFRFKPLTDRIQEERLRDICAKENVQCNNETINMLIDVSEGDLRKAITY
LQCAARLTGGKDITEQVIVEISGAVPSDLIDGLLAACHSSSFEKLEIVVKNMINDGYAAT
QLINQLHELIIDKEDLSDQQKSAITLKLAEVDKCLVDGADEYLQMIALSAVMMQQFTQSS
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcctttctaaaaggagctggtgctatcggcacgaaagcaacaagagaaaaaacc
gcaccaggaactagtggcgagaacaagaagcaaaaacctattccctgggtggaaaaatat
cgaccaaagtgtgtggctgaaattgcgtttcaggaagaagttgtggctgtactaaagaag
accattgaaggagctgaccttcccaacctgcttttttacggaccccctgggacagggaaa
acctctacaatattggctgcagcaagagaactctttggacctgagctgtaccgcaagaga
gttctcgagcttaatgcttctgatgaacgtggtattcaagttgtgcgggaaaaggtgaaa
acctttgcaaagttggcagtagcaggatctcgtttagatgggaaacctgctcctccattt
aagatcatcatcctggatgaagcagactccatgacaaatgctgcacaggctgcccttcgc
cgcacaatggagagggagtcaaaaaccacacgcttttgtctcatctgcaattatatcagc
aggataattgagccattgacgtctcgctgctccaaattccggtttaaacctttgacagac
cgcatacaggaagaaaggttgcgggacatctgtgccaaagagaatgtgcaatgtaataat
gaaacaatcaatatgctcatcgatgtatcagaaggagacttaagaaaagcgataacttac
ctgcaatgtgcagcaagacttactggaggaaaagacataacagagcaagtcatcgttgaa
atttctggagctgtaccatctgatttgattgatggtcttttggctgcttgtcacagtagt
tcatttgagaagctggaaatcgtggtaaagaatatgattaatgacggttatgctgcaaca
cagttaatcaaccagctacatgaactcattattgacaaagaggatctcagcgaccaacaa
aaatcagctatcacgctaaaattggcagaggttgacaagtgcttggtcgatggtgctgat
gagtatctgcaaatgattgctctttctgcagttatgatgcaacagtttacacagagcagc
taa
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