Leucoraja erinaceus (little skate): 129703338
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Entry
129703338 CDS
T09122
Symbol
hps3
Name
(RefSeq) LOW QUALITY PROTEIN: Hermansky-Pudlak syndrome 3 protein
KO
K20190
Hermansky-Pudlak syndrome 3 protein
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
leri04131
]
129703338 (hps3)
Membrane trafficking [BR:
leri04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
129703338 (hps3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HPS3_C
HPS3_N
Motif
Other DBs
NCBI-GeneID:
129703338
NCBI-ProteinID:
XP_055501681
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All DBs
Position
14:19221022..19267546
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AA seq
1043 aa
AA seq
DB search
MQQCEPTAKQRPATRRLMGRQPSFVASSVHDLDARHWKWCVCTTATXFSSQQIVPAEHEP
DSVCCGKDTLFVFSSGCKVATFSVAHNGCEPICTFSTLGKVQKITYSDRGNYLAAIEENN
KVLSLHVYLNWRRCQTREISRVSIRMVGHALQAPFIGAPKDQLEIIEVPLSEPPVSIACC
PVKGDLIVGCQNKVVLFRLKEGLADGESPVLDFERFLIVHVALELLEVAFCNGCLALVSD
LEVLVLKLQNVQDMESERQPQIPPKVLPPNKEMYGEDNKPAEADSLSQGQDDFVLFQGPL
ELLGEDASGSGVIISLECTGTEGLNTEPQDCLHFQQILYRRFTPDLSHIYLDEKTSLHSL
QLLPIFAAGDSESSSSSGSKEKRTISLFCFFSLPHKGYLYSVGNMVQELSAYSYPEKAKQ
AVLSSQLLHVITRNHLLCYSVRCSAVAARDVDPEIDTNNKACPPFFLPVSALRMQLFIGL
RAVCHSRNHLILLAKAEVNAPDRQTESKKGLPQRSRTVNNAPPATANSGWNLYCLQVIPT
VHLCREMVEYSLKYKTCSPQSYAHLLSEAHLILKAAILDPDLGQSDSKELLSAFRENCLQ
LGDCFSQFEVDDFHLTLPYYKMSGKSLSDLISRIPLWENEPQKFGKGFMYFLKHLVYEEI
EDPLSAEMANQVLQVFKLTEPTQIPHALCSPCMRNVCLRTAWDHLERLDSIRQSPLVSLT
KATVALRIEDQHKYHKAMRRYPEMRLVTGFVEEPNLVRHHGVVATDLSRELERTQPGLLV
VAFVALLKSDKITLDEADLFFKGLCGRDNKIDEAETPQVLVDFWEATLISFTEEVVTERL
LMKLVSVYLQRTARKLNPDQKPLKTVEELINSCGHFKKIYPWIHIINESSSQLPSEDLQK
LQSILCGSSIDITSVLHLLQQLPDDDAAGLSIRALCDTRLGKCEQVTDLLLDRCPEALLS
FAACEMQQGNQPLWWKKLLPELCERTRGPGGANQILVSSLQETLAVVASVLPPLDFLRLL
PDDGTASFFLPHLLECSRKSSIS
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaatgtgaacccacagcaaaacaacggcctgcaacccgcaggttaatgggccga
cagccgtccttcgtcgcttcctctgtacacgatctcgatgcgaggcattggaaatggtgc
gtgtgtacgactgccaccncgttctcctctcagcagatcgtcccggccgaacacgagccg
gactctgtctgctgcgggaaagacactctcttcgtcttctcctctgggtgtaaagtggcg
acgttcagcgttgcccacaacggatgcgagcccatctgcacgttctccactctcgggaaa
gtccagaaaatcacatacagcgacagaggaaattaccttgcggcaattgaagagaacaac
aaggtcctctctctccatgtctacttgaattggagaagatgccagacgagggagatctca
cgagtcagcatccggatggtgggacacgcgctgcaggctccatttatcggagctcccaag
gatcaattggaaattatagaggtgccactatcagagcctcccgtctccattgcctgttgc
ccggtgaagggggatctaatagtcggatgtcaaaataaggtggtgttgttccgcttgaag
gaagggctagcggacggcgaaagcccagtgttggactttgagcgattcctcattgtgcac
gtcgctctggagctgctagaagtggccttctgcaatggctgcttggctctggtgtcagac
ttggaggtgctggtgttgaaactgcagaatgtccaagatatggagagtgagaggcagccg
cagatccctccaaaagtcttgccgcccaacaaggaaatgtacggagaagacaacaaacct
gcagaagcagattctctgagccaaggacaggatgactttgtcctctttcagggccccttg
gagctacttggtgaagatgcgtctggatctggagtcataatcagcttagaatgcacgggg
acggagggtttgaataccgagccacaggattgcttgcacttccagcagattctgtacagg
cgtttcacaccagatctatcccatatttacttggacgagaaaacttcgctgcactctcta
cagctcctcccaatattcgctgcaggggactctgaatcgagcagttcctcagggagtaag
gagaaacgaacaatcagcctcttctgcttcttttcattgccgcacaagggctacctgtat
tcggtgggcaatatggtgcaggagctctctgcctacagttacccagagaaggccaaacaa
gcggtgctgagttcccagctcttacacgtcattaccaggaatcacttgctgtgctacagt
gtcaggtgcagtgctgtagctgctcgagatgtcgatccagagattgacactaacaacaag
gcttgtccaccattcttcctgcctgtgtctgccctgcgtatgcaactcttcatcgggctg
agagctgtatgtcattccaggaaccacttgatattgctggccaaggccgaggtcaatgct
ccagacaggcagactgaatccaaaaaaggattacctcaaaggtcaagaactgttaataac
gcacctccagctaccgcaaattccgggtggaatctatactgcctgcaagtgattccaaca
gttcacctgtgcagggagatggtggagtacagcctgaagtacaagacctgcagtccgcag
agttacgcccacttgctgagtgaggcccacctcatcctaaaggctgctattctggatcct
gacctgggccaaagcgacagcaaggaattactatcagcattcagggagaactgcctgcaa
ctgggcgactgcttcagtcagtttgaggtggacgattttcacttaactctcccgtactat
aagatgtcaggcaaatcactcagtgacctcatcagccgaatacctttatgggaaaatgaa
cctcagaaatttggaaaaggatttatgtacttcttaaagcatttagtctatgaagaaatt
gaagatccacttagtgcagaaatggcaaaccaggttttgcaagtgttcaagctgacggaa
ccaacccaaattccccacgccctgtgcagcccctgcatgagaaacgtgtgcctgagaaca
gcctgggaccacctggagagactggactccatcaggcagtctcccctggtatcacttacc
aaagcaacggtggcgctaagaattgaagaccagcacaaataccacaaggccatgaggcga
tacccagagatgagattggttaccggatttgtggaagaacccaatctcgtgcgacatcac
ggcgttgtggcaacggacttgtcccgagagctggagagaacgcagccgggcctcttggtg
gttgcattcgtagctctactgaagagtgacaaaatcaccctcgatgaggctgacttgttc
tttaagggtctctgtggtcgagacaacaaaatcgatgaggcagagactccacaggtgctg
gtcgacttctgggaagccacgttgatatccttcactgaggaagtggtgaccgagcgtctc
ctgatgaaactggtgtcggtgtatctccagaggacagcccggaaactaaatcctgaccag
aaaccgctcaagacagtggaggaactgatcaattcgtgtggtcatttcaagaagatttat
ccatggatccacatcatcaatgaatccagttcccaactaccttctgaagatctgcagaaa
ttgcagtccattttgtgcggttcttcgatcgacataacatcagttcttcatcttctgcaa
caactccccgatgacgatgctgctggtctaagtatccgtgcactgtgtgacaccaggctg
ggtaaatgtgagcaagttactgacctgctgctcgacagatgtccagaagcacttctatca
tttgccgcgtgtgagatgcagcagggaaaccagcctctgtggtggaagaagctgttgcca
gaactttgtgaaaggacaagaggacctggaggagcaaatcaaatcctggtgtcttcactg
caagagaccctggcagtggtggctagcgttctccctcctctggatttcctgaggctgctg
ccagatgacggcactgcctcgtttttcctacctcacctcctggagtgcagcaggaagagt
tcaatcagctga
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