Leucoraja erinaceus (little skate): 129703506
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Entry
129703506 CDS
T09122
Symbol
sned1
Name
(RefSeq) sushi, nidogen and EGF-like domain-containing protein 1
KO
K24470
insulin-responsive sequence DNA-binding protein 1
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
leri04990
]
129703506 (sned1)
Domain-containing proteins not elsewhere classified [BR:
leri04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
129703506 (sned1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
NIDO
hEGF
EGF_TEN
fn3
EGF_2
EGF_CA
cEGF
EGF_3
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
129703506
NCBI-ProteinID:
XP_055502008
LinkDB
All DBs
Position
14:complement(30961704..31049064)
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AA seq
1324 aa
AA seq
DB search
MWTPGPLRTDSHTPCRCPGLRLMELLPAATLLALLGGICCSVPLGDFYPFGLENGDSVNG
KVDDGGSGLLEISHSFPFFGERHSGLYVNNNGIISFLKEVSQFTPVAFPISNDRRVVAAF
WADVDNRRAGDVFYRETKDPMILQSATNDIRRYFPELEEFTTQWAFVATWYKVTFFGGST
FSPVNTFQIVLVTDGEFSFTIFNYENITWTTGMHASSGGDFAGLGGIAAQAGFNAGDGKR
YFNIPGSRTDDIVDVEMTTNVGIPGRWVFRIHDAQVEIGGCNDTASVCLNLRPCLNNGRC
IDDCITGNPSYTCSCRAGFTGRRCQIDIDECASYPCHNGGTCLDGQNAYTCQCTAGYTGV
ICEKDIDDCASNICQNGGMCIDGIDAYSCKCLIGFTGKHCEIADSLCKSKECQNGGVCDI
NNGTAVCICQKGYTGESCENETNECNSNPCLNGGECIDLIDNYTCLCLQPFTGKHCETDE
STTLNACQPNPCLNGGSCNETEGGYLCNCPEGFTGRDCENEVLQLCNAHHQCPHGASCAE
YGGTYRCICPQGSSGKDLIPSPCDSDPCQKGGTCKELDGSYTCQCPPGVSGLHCEKERLR
SCASSPCRNGGTCKEAPGGTYQCTCLYRFTGKNCETGKPDPCSSSPCQNSGTCFHYIGKY
KCECPRGFTGRHCDTEVDCGIPSEVKHTELLISSTKYGSVAQYICEAGFIVQPSTGESTC
QLDGRWSEAPICDEIDECSSEPCWNGGSCKDGINSFVCECQKAFTGTFCESAVNPCRLSP
CGARGFCRSVNGSYVCTCKVGYSGKHCNAELAPPAELRVEKSEENAIEISWQAPGADSTQ
DLIDGFAVTYTSYNGEMRKTDFVDKSRSRHLLRSLSPGRLYNISIFSVKRNVNQNDISKP
AVLHVWTKPGPIGNLSLANVTATSISIAWSLYSPKQAATSTVRLSLRSSDLVRDITVPLS
SNLTRYTFGDLSPQELYTVEVVPQMGLKGQDDPWRGIATQSLIVWTRPLPPHNLVLAGVT
TTTAKLHWNNPPSGSSNGFILNITTNHNLKSRHLPNGKLTTYNVRNLEMGRRYNLALMRV
LNTERGKLVSDPAHLTFSTVGTHSGTSQREGHGKGKAKSEPVNVGVHNNLLHITTQPDEE
AEINNRSYEDNSQVIRYSEMVDGRGRISATFGNLPPKPITHRASPEPPIQLENLEESTNR
ISLALEMQESEANAKSETNSKPDDHQECSSNPCKNGGTCVKGMNSYLCDCEAGFKGKYCE
LFCKKLPHPCTRLYSETKSIPVWEDSVFQFKYRRIYKVHQDTCYKEVCEPVIHRTPRNRR
LFRR
NT seq
3975 nt
NT seq
+upstream
nt +downstream
nt
atgtggacaccgggaccgctgcggactgactctcacacaccgtgcaggtgccccggcctg
agactgatggagctattgcccgccgccacattgctggcgctgctgggaggaatatgctgc
tcggtgccgctcggcgacttctacccgttcgggctggagaacggcgactcggtcaacggc
aaagtggacgatggaggttccgggctcctggagatctcgcacagcttccccttcttcggg
gagaggcactccgggctttacgtgaataataatgggatcatatcattcctgaaggaagtt
tcccagttcacgccagtggcatttccgatctctaatgaccgtcgagtggtggcggccttc
tgggcagatgtggacaaccgtcgagctggagatgtcttctacagggagaccaaggaccct
atgatccttcagagtgctaccaatgacattaggagatactttccagagcttgaggaattc
accacccagtgggcattcgtggccacttggtacaaagtaacattctttggaggaagcaca
ttttcaccggtcaacactttccagattgtcctggtcacggatggagagttttctttcact
atcttcaactatgaaaatatcacctggacaacaggaatgcatgccagcagtggaggggat
tttgctggattaggaggcattgccgcacaggcaggttttaacgctggagatggaaaacgc
tacttcaatattcctggttcacgcacggatgacattgtggatgttgagatgacaaccaat
gttggaattcctggccgctgggtattccggatccatgatgcccaagtcgagatcggtggc
tgcaatgatacagcctcagtgtgcttgaatcttcgaccatgtttgaacaatggaaggtgc
atcgatgactgcatcaccggaaatccttcttacacttgctcgtgtcgtgccggattcacg
ggccggaggtgtcagatagacattgatgagtgtgcttcatacccctgtcacaatggtggg
acgtgcttggatggacaaaatgcctacacttgccagtgcactgctgggtacacaggagtg
atttgcgaaaaagatatcgatgattgtgcgtcaaatatctgccaaaatggaggcatgtgc
atcgatggaattgatgcatatagctgcaagtgcctaataggctttaccgggaagcactgt
gagattgctgactccttgtgtaagagtaaagaatgtcaaaatggtggtgtctgtgatata
aacaatggaacggcagtgtgtatttgtcagaagggctacactggagaaagctgtgaaaat
gaaacgaatgagtgtaactccaacccatgtctgaatggaggagagtgtattgacttgatt
gataattacacctgtctgtgccttcagccgttcactggaaaacactgtgagacagatgag
agcacaacattgaacgcctgccagccaaacccatgtctgaatggcggtagttgcaacgag
accgaaggtggctacttatgcaactgtccggaggggtttacaggtcgtgactgtgagaat
gaggtgctccaactttgcaatgcccaccaccagtgcccccatggtgcttcctgcgctgaa
tatggaggaacgtatcgctgcatctgtccgcagggatccagcgggaaagatttgatccca
tccccttgtgactccgatccctgtcagaaaggaggcacttgcaaggaattggatggctcc
tatacctgtcaatgtccaccaggtgtcagtggactgcactgtgaaaaagaaagactccgc
tcctgtgcatccagtccatgtcggaatggtggaacctgcaaagaggctcccggaggaact
taccagtgcacctgtttgtatcgattcactggcaagaactgtgagacaggtaaaccggac
ccttgctcctccagcccctgccagaacagtggcacctgcttccattacattggaaaatac
aagtgtgagtgtcccagaggattcacaggacggcactgcgatacagaggtggactgcgga
attcccagtgaagtgaagcacacagagctcctcatttcttcgaccaagtatggctccgtt
gctcagtacatttgcgaagctggattcattgtgcagcccagtactggggagagtacctgc
caactggatggaagatggagtgaagcaccaatctgtgatgaaatcgatgaatgctcttca
gagccctgttggaacggtgggagctgcaaggatgggattaatagctttgtgtgcgagtgt
cagaaagcattcactggaacattttgtgagtcagctgtgaatccctgccgtctcagccct
tgtggtgcccgtggcttctgtcggagtgtgaatgggtcgtacgtctgcacttgcaaagtc
gggtactctggcaagcattgtaacgcagaactcgctccacctgcagaactgagagtggag
aaatctgaagaaaatgccatcgaaatctcgtggcaggcaccaggagctgacagcacccag
gacttgatcgatggctttgcagtaacgtacacatcgtacaacggggagatgcgcaagacc
gactttgttgacaagagcaggtcacgccatttgctgagatcactatcaccgggaagactt
tacaacatctccattttctcagtgaagcgtaacgttaatcagaatgacatcagcaaacct
gctgtgctgcatgtgtggacaaaacccggtcctattggaaatctatctttggcaaatgtc
actgctaccagtatatccatcgcctggtctttgtacagtccgaaacaggcagcgacaagc
acagttcgactgtccctgaggtcttctgacttggttagggacataacagtcccactgagt
tccaatctcacacggtacacctttggtgatctttctccacaagaactctacacagtggag
gttgtgccacagatgggtcttaaaggccaggacgatccttggaggggaatagcaacacaa
tccctaattgtgtggacacgaccactccctcctcacaatcttgtgctggctggagtcaca
acaaccacggcaaaactccactggaacaaccccccgtctggctctagcaatggcttcatc
ttgaatatcacaaccaaccacaacttaaaaagccgccaccttcccaatggaaagttaacc
acgtacaacgtgcgcaatctggagatgggacgaagatacaacctggcgctaatgagagtg
ctgaacacggagaggggcaagctggttagtgacccagcccatctgaccttcagcacagtg
ggaacccacagtggcacaagccaaagggaaggccatgggaaaggcaaggccaagtcagag
cctgtcaatgtaggggtgcacaacaacctgctgcatatcacaacacaacctgatgaagag
gccgaaatcaacaacaggagctacgaagacaattctcaagtcataagatactccgagatg
gtggatggaagaggcagaatcagtgccacatttggcaatctaccgcccaaaccaataact
caccgagcatctccagagcctccaattcaactagaaaacttggaggaatcgactaatcga
atcagtctggccctggagatgcaagagtctgaggccaatgccaagtctgagaccaacagc
aagcccgatgaccaccaggaatgttcctcaaacccctgtaaaaatggagggacttgcgtg
aaggggatgaactcgtatctgtgcgactgtgaagcagggttcaagggaaaatactgtgaa
ttgttttgcaagaaactaccacacccctgcacacgcctatactccgaaactaaatctatt
ccagtgtgggaggacagtgtcttccagtttaagtatagaagaatttataaagttcaccag
gatacctgctacaaagaagtttgtgagcctgtaatacacagaacacccagaaacagaagg
ttattcagacgttaa
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