Leucoraja erinaceus (little skate): 129704018
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Entry
129704018 CDS
T09122
Symbol
tial1
Name
(RefSeq) nucleolysin TIAR isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
leri03019
]
129704018 (tial1)
03041 Spliceosome [BR:
leri03041
]
129704018 (tial1)
Messenger RNA biogenesis [BR:
leri03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
129704018 (tial1)
Spliceosome [BR:
leri03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
129704018 (tial1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Nup35_RRM_2
RRM_Nup35
Calcipressin
Toxin-deaminase
Motif
Other DBs
NCBI-GeneID:
129704018
NCBI-ProteinID:
XP_055502812
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All DBs
Position
15:20198927..20230559
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AA seq
390 aa
AA seq
DB search
MDDDSYPRTLYVGNLSRDVTEALILQLFSQIGPCKSCKMITEQTASRRVNSSVGFSVLQH
SSNDPYCFVEFFEHRDAAAALAAMNGRKIMGKEVKVNWATTPSSQKKDTTNHFHVFVGDL
SPEISTEDLKSAFAPFGRISDARVVKDLATGKSKGYGFVSFYSKLDAENAIVHMGGQWLG
GRQIRTNWATRKPPAPKSAPENGSKQLRFEEVVGQSSPSNCTVYCGGISSGLTEQLMRQT
FSPFGQIMEIRVFPEKGYSFVRFGTHDSAAHAIVSVNGTTIEGHVVKCYWGKETTDTTNK
YQQMEFAQPWGQWGQWYGNAQQYGQYVANGWQVPPYGMYGQTWNQQGFGVDQPPSTTAWV
GGFGAQPPQGQGTAVIPNQAGFGMAGYQTQ
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgactcgtacccgcggaccctctatgtgggtaacctctctagagatgtgaca
gaagcccttatacttcaactttttagtcagattggtccatgcaaaagttgcaaaatgatt
acagagcaaaccgcaagcagaagggtgaactcttctgttggattttctgttttgcagcat
tcaagcaatgatccatattgctttgtggaattctttgagcatagagatgcagcagctgca
ttggctgcaatgaatggccgtaaaataatgggtaaggaagtcaaagtaaattgggcaaca
acaccaagtagccagaaaaaagacacaactaatcattttcatgtgtttgtgggtgactta
agtccagaaataagcacagaggatctaaaatctgcatttgccccttttggtcgaatatcg
gatgctcgcgttgtaaaagatctggcaacgggtaaatccaaaggctatggatttgtgtca
ttctacagtaaactggatgcagaaaatgcgatcgtccacatgggaggacagtggctggga
ggccggcaaattcgaacaaactgggcaacacgtaaaccaccagctccgaaaagtgcacca
gagaatggttctaagcaactaagatttgaagaagtagttggtcaatccagtccttcaaat
tgtacggtttactgtggaggtatatcatcaggtctaacagaacagcttatgcgtcagact
ttctctccatttggacaaattatggaaatcagagtttttcctgagaaaggatattccttt
gtcaggtttggcacacatgatagtgctgctcatgctattgtgtcggtcaatggaactact
attgaaggccacgtagttaaatgctattggggtaaagaaactactgatactaccaacaag
tatcaacagatggaatttgctcagccctggggtcagtggggccagtggtatggcaatgcc
cagcaatatggccagtatgtagccaatggttggcaagtgcccccttacggaatgtatggc
caaacatggaatcaacaaggatttggagtagaccagcctccatctacaactgcctgggta
ggtggatttggtgctcagccaccccaaggacagggtactgctgttatacctaatcaggct
ggctttggaatggcaggttaccagacacagtga
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