Leucoraja erinaceus (little skate): 129704191
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Entry
129704191 CDS
T09122
Symbol
cfap43
Name
(RefSeq) cilia- and flagella-associated protein 43
KO
K24223
cilia- and flagella-associated protein 43
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
leri03037
]
129704191 (cfap43)
Cilium and associated proteins [BR:
leri03037
]
Motile cilia and associated proteins
Tether/Tether head (T/TH) complex
129704191 (cfap43)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
WD40
WD40_Prp19
CFAP43_N
EIF3I
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
Beta-prop_WDR75_1st
PH_6
Dsc3_C
Motif
Other DBs
NCBI-GeneID:
129704191
NCBI-ProteinID:
XP_055503106
LinkDB
All DBs
Position
15:34976838..35046991
Genome browser
AA seq
1680 aa
AA seq
DB search
MQNKDTLTLRWVKGYTTQNVLFVDDSTICYPCGNFLIFVDTETKEEMVLKCETGSIGAFT
ANSNSKVVAFAEKRLKPSIYVYNFPELSKAAVLTDGAELEYTLLDFSYMGSYFASFSSIP
DFTLTIWNWKTGHNLCSKSMMRMQACVLCFNPMNQLQLCLASCDCLLVWNIERCNEFHLL
TQVNVELPTEDESMTFHEDFRISPDCNALAYYGPKMLISAQAGLVGEMAKTFVTQELQKT
IVQPVSVCWTPTSDLYVGCKKGELLHVDADLHKAVLVAGSSLESFIIGAGNVPDWPTSTI
RMNIHPTLQPCSVNTLAFSTKGLFTAGKDGKLYCLTFKFHNLEVEECWSAASSIRNITFS
SDHTSLLIATEEGLAFLYNPLEKADVSTALNVYSGDFVSAMFLGTGTQYCVSARKLGIMQ
VWSLKDGKNISTLALPERISAMACCPSSDHVALATETGHIYYANLVTVETPQLIHQVFLH
RMAIQSLKYDPEGQFLVAGCSDGYIFSMNAKPSKLFKVFGYTEIKAEILGVSVVLNNLRK
NVDCLTLSCQPGEHKCHGGTELTMFQLLGEDTAAKTYINNRGMMSDVAIKKMSCRNRLPL
TSAVHDCEDNLYGFCSQTRSILKYKIIKDVNNKAFNLMLQVKVQAHQLGPGFLHLSQDQE
YLASAARDGFIQIRDASSMEINFETQCHSYHSGGVRSVDFSLDRQTVLTTGIHDGTLICF
SSKFDTENTLRTKAAIEFSVSTFSLLSQTSKTENKVLDLIEHKHQLDGKEDTHLPISKSS
TYSVASNISHGSMPESQRLTDERSITSLEETWLEKKNKEAIKKDNFHHADVKAHLREGIK
KLRQTIHIMMMENERVPPNERLNQHEFNLDLKEQKKLHIEGEEKVAKVRESIEMTNLANQ
YLREVIKRECWDQMEVKGRMLEAFDSGIAVTNYSKRERRKKDLDLLKQITRQRTIEQIDM
KARKDIVETPPKKEEKDEEEAEEDDSKEDENLAVKGSLTYLYGLVNPYLYRQLDLHTKDQ
KINQIILLQDMIHNIKTDFNKEFDATYKQKEVEISRVNDRNVRIREIIMQLDMDEAVWLP
TMSNNEKPERDLEVLESEISAERYLTEEQKAKLEEEFNAEQLRILLAKADNWRERALMDM
MGGVLEAKKSDILKMEIPAPLFMVMPEYEWNDEQIKQAKEYTIKDQALSEEKDKYRKTLE
SELRKLQASIAETTNGFDDIVNKLFEKKVRTEMIIYQEELKICNLLFSLQIEEEIQNRNA
QLNFLLAEQKSCVGSKAQVMQDTKMMVDQFRETYDDLVAEDRLLERGFRKEFFDVNAATV
DQLYKIYKRRPKMQTKRAQVATANPFGYWPESASEGHVNLLSSMEELNTTRFKPEHLDQA
VWERLCDIRNMKIESEHQVKLKAVTLAEMQTFLQKRIEEDEYCNQMITNYTQDISSLCEI
KSQFQMNLMVQLVLKQGQVEVMSDDFISEYNTSILLHKAVVEDLNNTIQLLGEKKVAIMV
ECKDFKKGIVQLEWEYRKMLMQMDDLHNKIRDILKFTITRQAQMYLREDNYEARVTDHIM
VMERSVDGQETFHDRVLLQKRDSIKKLQKQISQLKRDLKTMDQLLKEQHISVSERLHIQE
MTATIKPEEEARARFKELMQHRRLVELTKAQVEDINTLRMELEKQRMRTFPVLSDREQET
NT seq
5043 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacaaagatacccttacactcagatgggtgaagggttacaccacgcagaacgtg
ctatttgtcgacgacagcacaatatgctacccctgcgggaacttcctgatatttgtggac
acggaaacgaaggaggagatggtgctgaagtgcgagacagggagcattggggctttcacg
gccaacagcaacagcaaagtcgtggccttcgcggagaagaggttaaagccgtccatctat
gtgtacaatttccctgagctgagcaaggctgcggtcctcactgatggggcagagctggag
tacacactgctggattttagctacatgggatcctactttgccagtttctcctcaatcccg
gacttcactttaaccatctggaactggaaaacgggccataatctctgcagcaagtcaatg
atgcggatgcaggcatgtgtcctgtgcttcaaccctatgaaccagctgcagctgtgcttg
gccagctgcgactgtctgctggtgtggaatattgaacgctgcaatgaatttcacttatta
acacaagtaaatgtagagcttcctacagaggatgaaagtatgacatttcatgaggatttt
aggatcagtcctgactgcaatgcattagcttactatggacctaagatgttaatatcagca
caggctggtcttgtgggagaaatggccaagacatttgtgacacaagagctccagaagacc
attgtccaacccgtgtctgtttgctggaccccgacctctgatttatacgtgggctgtaag
aaaggggaactgttacacgtggatgcggacctgcataaagctgttttagtggcaggttca
tctcttgagtcgttcatcataggtgcggggaatgtgccggattggcctacatcgaccatc
aggatgaacatacatcccaccctacagccgtgctccgtgaatacgctggcattcagtaca
aagggactgtttacagcagggaaggatggaaaactctactgcctcacgttcaaattccac
aatttggaggttgaagagtgctggtctgcggcttcatcgattaggaatattacattttca
tctgatcacacatcgctgctcattgctactgaggagggtttggcatttttatataaccca
ttggagaaagctgatgtgagcacagccttgaatgtgtacagtggggactttgtatcagca
atgtttctgggcactgggactcagtactgtgtgtcagcaagaaaattgggtatcatgcaa
gtatggtcactcaaggatggaaaaaacatcagcactcttgcactgccagaaaggatcagt
gccatggcatgctgtccttcctctgaccacgtggctctggccactgaaactggtcatatc
tattatgccaacttggtgacagtggagactcctcagctgatccaccaagtctttctccac
agaatggcaatacagagtctgaagtatgatccagagggacaattccttgtggctggatgc
tccgatgggtatatattcagtatgaatgccaaaccctccaaattatttaaagtatttgga
tacacagagataaaagctgagattttgggggtgtctgttgtgttgaacaatttgaggaag
aacgtggactgcctgacactgtcctgtcagcctggagagcacaaatgtcacggagggacc
gagttaaccatgtttcagctgctgggagaggatactgcagctaaaacgtacatcaataac
cgaggaatgatgagtgatgtggccattaagaagatgtcctgtcgtaacaggctgcccctc
acctctgcagtccatgactgcgaggataatctgtacgggttctgcagtcagacccgcagc
atcctcaagtacaagatcatcaaggatgtgaacaacaaagcatttaacctgatgctccag
gtcaaggtgcaagcccaccagctgggacctggattcctccacctctcccaggatcaggaa
tacttggcttctgcagccagggatggattcattcagatcagagatgccagcagcatggag
attaacttcgagacccagtgtcactcgtaccactccgggggagtgaggtcagtggacttt
tccttggatcggcagacagttctgaccactggcattcatgacggcactctcatctgcttt
tcgtcaaagtttgacacggagaacactttgcggactaaggcagcaatagaattcagtgtc
tcaacattttcattgctgagtcagacctccaagacagagaacaaagtgctggacctgatt
gaacacaagcatcaattggatgggaaggaggacacccacctacccatatccaaaagctcc
acatactccgtggcctccaacatctcccacggctccatgcccgaatcccaacggctcacc
gatgaaaggtcaattacttcgttggaggaaacttggctggaaaaaaagaataaagaagcc
atcaagaaagacaacttccaccacgcagatgtcaaagctcacctaagggaaggaatcaag
aaacttcgtcaaacgatccatataatgatgatggaaaatgagagagtgcctccgaatgag
cggctgaaccagcacgagtttaacctggacctgaaggagcagaagaagctgcacattgag
ggagaggagaaggtggccaaggtgcgcgagtccatcgagatgacgaacctggccaaccag
tacctgcgggaggtgatcaagagagagtgctgggaccagatggaagtgaagggccggatg
ctggaggcttttgattcaggtatagcagtgaccaattactcgaagagagagcgcagaaag
aaggacctggacttgctgaagcagataacacgtcagaggacaattgaacagatcgacatg
aaggctcggaaggacatcgttgagacacctcctaagaaggaggagaaagatgaagaggaa
gcggaggaagacgactcaaaggaagatgagaacttggccgtgaaaggcagcctgacgtac
ctatatggtttggtgaacccatatttgtatagacagttggacctgcacacaaaggatcag
aagattaaccagatcatcctcttgcaggacatgattcacaacatcaaaaccgacttcaac
aaggagtttgatgcaacttacaagcagaaggaggtggagatctcccgagtgaacgacaga
aacgtgcgcatcagagagatcataatgcagctggacatggacgaggccgtgtggttgccc
accatgagtaacaacgagaagcccgagagagacctggaggtgttagagtcagagatttca
gctgaacggtacctcacagaggaacagaaggcaaagctcgaggaggagtttaacgcagag
cagcttcggatactgcttgctaaggctgacaactggcgtgagcgcgctctgatggacatg
atggggggagtcctcgaggccaagaagtcagacatcctgaaaatggaaattcctgcaccg
ctcttcatggtaatgccggagtacgaatggaatgatgagcaaataaagcaagccaaggag
tacaccatcaaggaccaggctctgagtgaggagaaggacaagtacaggaagaccctggag
tctgagctgaggaaactgcaagcgtccatcgcagaaacaacaaatggatttgacgacata
gttaacaaactctttgaaaagaaagtgcgaacggagatgattatctaccaggaggagctg
aagatctgcaacctgctcttctcactacagatagaggaggaaatacagaaccggaacgct
caactcaacttcctgctggctgagcagaagagctgtgtggggagcaaggctcaggtgatg
caagacaccaagatgatggtggaccagttccgagagacctacgacgatctggttgctgaa
gacaggctcctggaacgtgggtttaggaaggagttctttgatgtcaatgctgcaacggtc
gaccagctctacaaaatatataaacgtcgacccaagatgcagacgaagagagcccaggtg
gcaacagccaacccttttggctactggcccgagtcagccagcgaaggacacgtcaacctc
ctgtcgtccatggaggagctgaacacaactcgcttcaagcccgagcacctggaccaagcg
gtgtgggagcggctctgtgacatccgtaacatgaagatagagagcgagcaccaggtgaag
ctgaaggctgtgaccctcgccgagatgcagactttcttgcagaagaggattgaggaggat
gagtactgcaaccagatgatcaccaattacacacaagacatcagcagtctgtgtgagatc
aagtcacagttccagatgaacctgatggtgcagctggtgctgaagcagggccaggtggag
gtaatgagtgacgacttcatctccgaatacaacacctccatcctcctgcacaaggccgtg
gtggaggacctgaacaacaccattcagctattaggagagaagaaggtggcgatcatggtg
gaatgcaaggacttcaagaaaggaattgtccagttggagtgggagtacaggaagatgctg
atgcaaatggatgacttgcacaacaagatacgcgacatcctcaaattcacaatcaccaga
caggcacaaatgtatttaagagaggataattacgaagctcgagtcactgatcacataatg
gtaatggagcgatctgtggatggtcaggaaacgtttcatgatagagtcctgctccaaaaa
agagacagcatcaaaaagctgcagaagcagatctcgcagctgaagcgggatctcaagaca
atggatcagctgttgaaggagcagcacatctctgtcagtgagagactgcacatccaggaa
atgaccgcaactatcaaaccagaagaagaagcacgtgctcgcttcaaggaactgatgcag
cacaggagattggtggaactgaccaaggcccaagtcgaggacattaacaccctgaggatg
gagttggagaagcagcgcatgagaacctttccagtgctgtccgacagagagcaagaaacc
tag
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integrated database retrieval system
