Leucoraja erinaceus (little skate): 129704272
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Entry
129704272 CDS
T09122
Name
(RefSeq) interferon-induced protein with tetratricopeptide repeats 5-like
KO
K24850
interferon-induced protein with tetratricopeptide repeats 5
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
leri03016
]
129704272
Transfer RNA biogenesis [BR:
leri03016
]
Eukaryotic type
tRNA degradation factors
Other tRNA degradation factors
129704272
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_19
TPR_2
TPR_1
TPR_17
TPR_14
TPR_12
TPR_8
TPR_16
TPR_CcmH_CycH
TPR_11
TPR_15
TPR_10
TPR_Slam
TPR_7
ARM_TT21
ARM_TT21_C
Iml2-TPR_39
NatA_aux_su
TPR_MalT
Fungal_trans_2
ThrE
Motif
Other DBs
NCBI-GeneID:
129704272
NCBI-ProteinID:
XP_055503253
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All DBs
Position
15:complement(43127681..43137975)
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AA seq
479 aa
AA seq
DB search
MSDTLRESLLVKLGQLQCHFTWGPQMDIVDLDDVKQKLQDSIIIGGNHQGVPHNQLAYIN
YLQGNYEEALRDLEEAERRLREIHGDGFERRSIVTHGNRAWLHYHMGQLNEAQSYLDKLE
VMCGPLTQGPHVTAMVPEVLGEKGWSLLISCSQCYEEAKECFAKTLEEDPDNTEWNMGYA
TALYRLESISRIPENPEVSQSVRQLRRVLELDPGESVARVMLALRLQEFQQMAEANELVE
EALRTSPDSPYVLRYAAKFYRTECNVDKAIEMLKKALEFTPRSSFLHHQMGMCYREKLMA
LRKNQGIADPGVKAELIGHCKHHFGTAFELEPSFILAQLDFASICLMNGESDRAVKIYND
LQSLEDIAPDRKQAIEIQLGFYELNYTKSESNASHHFMEGLKIRRGTKYWKICYTKLEQI
ARRQITRNPYNSRAWGILGFLHREAGENSEAVECYEKALRWDRGNKEYLSVLRELRPST
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacacactgagggagtccttgttggtgaagctcggccagcttcagtgccacttc
acgtggggcccacagatggacatcgtcgacctggacgacgtgaagcagaagttgcaggat
tcgattatcatcggcgggaatcaccaaggcgtgccgcacaaccagctggcttacatcaac
tacctgcagggcaactacgaagaagctctccgtgacttagaggaggcggagagacgtctg
agggagatccacggggatggatttgagaggaggagcatcgtcacccatggcaaccgggcc
tggttgcattaccacatggggcaactcaacgaggcccagtcctacctcgacaagctggag
gtgatgtgtggccccctcacacagggcccgcacgtcacggcaatggtgcccgaggtgttg
ggggagaaggggtggtctttgctgatctcctgctctcagtgctacgaggaggcgaaggaa
tgtttcgccaagactctggaggaagatcccgacaacacggagtggaacatgggctacgcc
accgctctgtaccgtctggaatcgatttccaggatcccggaaaatcccgaagtgagtcag
tcggtgagacagctgagacgggtgctggagctcgatccgggtgaatctgtggccagggtg
atgctggccctcaggctccaagagttccagcaaatggcagaagcgaatgaattggttgaa
gaagcgttgcggacaagcccagattctccatatgtgctccgctatgcagcaaagttttac
agaacagagtgcaatgttgataaagcgatagagatgttgaagaaagccttagaattcact
ccgcgctcttccttcttgcaccatcaaatgggcatgtgttacagagaaaagctaatggct
ctgcgtaaaaatcaaggcattgcagacccaggcgtgaaggccgagttgatcggccattgc
aagcaccattttggaacggcatttgaactggagccatcgtttattcttgcacagctggat
tttgccagcatctgcttaatgaatggtgaatcagacagggcggtgaagatatacaacgac
ctccagagtttagaggatattgctccagatagaaagcaggcaattgagatacagcttgga
ttctatgaactgaattacaccaaatctgaatcaaacgccagccaccattttatggaaggc
cttaaaatccggcgcggcacgaaatattggaaaatttgttacactaagttggagcagatt
gcaagaaggcaaattaccaggaacccgtacaacagcagagcctggggtatcctggggttt
cttcaccgagaagccggggagaattctgaagctgttgaatgctatgaaaaggccttgcgg
tgggatcgtggcaacaaagaatatctcagcgttcttcgtgaattgcgcccttctacttag
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