Leucoraja erinaceus (little skate): 129704446
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Entry
129704446 CDS
T09122
Symbol
wnt5a
Name
(RefSeq) protein Wnt-5a isoform X1
KO
K00444
wingless-type MMTV integration site family, member 5
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04150
mTOR signaling pathway
leri04310
Wnt signaling pathway
leri04916
Melanogenesis
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
129704446 (wnt5a)
04150 mTOR signaling pathway
129704446 (wnt5a)
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
129704446 (wnt5a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
leri00536
]
129704446 (wnt5a)
Glycosaminoglycan binding proteins [BR:
leri00536
]
Heparan sulfate / Heparin
Morphogens
129704446 (wnt5a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
wnt
DUF6973
Motif
Other DBs
NCBI-GeneID:
129704446
NCBI-ProteinID:
XP_055503496
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Position
16:complement(1643665..1700647)
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AA seq
420 aa
AA seq
DB search
MLGQFHTLTVNSRWAKCRNKLITNPKRRSFQVFGLSWNKLDIFWGVAEVAHRALESALKG
TMALTSLLLALTFLSGCKQAVVEANSWWSLAMNPIQIPEVYIIGAQPLCSQLAGLSQGQK
KLCQLYRDHMQYIGEGAKTGIKECQHQFRHRRWNCSTVDNTSVFGRVMQIGSRETAFTYG
VSAAGVVHAISRACREGELATCGCSRAARPKDLPRDWLWGGCGDNVEYGYRFAKEFVDAR
EREKIYQKGTYDSARTFMNLHNNEAGRRTVYNLADVACKCHGVSGSCSLKTCWLQLADFR
KVGDSLKEKYDSATAMKLNGRGKLVQVNSRFNPPTTLDLVYVDQSPDYCIRNQTTGSLGT
QGRLCNKTSEGMDGCALMCCGRGYDQFKTVRTERCHCKFHWCCYVKCKKCTEVVDQFVCK
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcttgggcaatttcatactttgacagttaactcgaggtgggcaaagtgcaggaataaa
ctcattaccaatccaaaacgcagatcctttcaagtgtttggcttaagttggaacaaacta
gacatattttggggcgttgcggaggtggcacacagagcgctggagtcggctttgaaaggt
accatggccttgacgtctctactcctcgccctcaccttcctgtccggctgtaaacaggcc
gtggtcgaggccaactcttggtggtctttagccatgaacccgattcagatacctgaggtg
tacatcattggagcccagcctctgtgtagccagctggccggcctttcccaaggccagaag
aagctgtgccaactctaccgagatcacatgcagtatatcggagagggtgcaaaaaccggc
atcaaggaatgtcaacatcagttcaggcatcgccggtggaactgcagcacggtggacaac
acgtctgtctttggcagggtcatgcagatagggagccgcgagacggccttcacgtacggg
gtttctgcagcgggagtggtgcacgccatcagtcgcgcgtgtcgcgagggagagctggcg
acctgcggctgcagccgggcagcgagacccaaggatttacctcgagactggctatggggc
ggctgcggagacaatgtggagtacggctacaggtttgccaaggagttcgtggatgccagg
gagagggagaaaatctaccagaaaggaacttatgacagtgccaggacatttatgaacctg
cataacaatgaagctggaagaaggacggtgtacaacctggcggacgtggcgtgcaagtgc
cacggggtgtcgggctcgtgcagcctgaagacgtgctggctacagttggcggatttccgc
aaggtgggcgactcgctgaaggagaagtacgacagcgccacggccatgaaactgaacggg
cgcggcaagctggtgcaggtgaacagccgcttcaacccgcccaccaccctggacctggtg
tacgtggaccagagccccgactactgtatccgtaaccagaccaccggctccctcggcacg
cagggccgcctgtgcaacaagacatcagagggcatggacggctgtgcgctcatgtgttgc
ggacgtgggtacgaccagtttaagacagtccgtactgagcgctgtcactgcaagttccac
tggtgttgttacgtcaaatgcaaaaagtgcaccgaggtggtggaccagttcgtctgcaaa
taa
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