Leucoraja erinacea (little skate): 129704646
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Entry
129704646 CDS
T09122
Symbol
lamb2
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit beta-2
KO
K06243
laminin, beta 2
Organism
leri
Leucoraja erinacea (little skate)
Pathway
leri04510
Focal adhesion
leri04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129704646 (lamb2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
129704646 (lamb2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
LAMININ_IV_B
Alanine_zipper
F5_F8_type_C
EzrA
Motif
Other DBs
NCBI-GeneID:
129704646
NCBI-ProteinID:
XP_055503888
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All DBs
Position
16:complement(24509206..24559117)
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AA seq
1780 aa
AA seq
DB search
MNLFILLVCVMGGTVAQAPDAAHGCAQGSCYPATGDLLVGRQRKLTASSTCGLRGKQRYC
IVSHLQDEKKCFLCDSRRSYDRLQNPNSHRVRNVITAFTQYRKEAWWQSENGVSDVHLQL
DLEAEFHFTHLIMTFKTFRPASMLIERSADFGRSWQVYRYFSHDCATDSPGVRRGPQREV
DEVICESRYSDIEPSTEGEVIFRVLNPAIAIEDPYSPRIQNLLKITNLRVNFTKLRTLGD
NLLDTRREIKEKYYYALYELVVRGNCFCYGHASECAPIAGVPGNIEGMVHGRCVCNHNTH
GLNCEKCADFYNERPWRPAEGRNTNACKRCDCNNHSARCHFDMAVFLATGNASGGVCDDC
FHNTMGKNCEMCKPFYYHHPSRDMRDPRVCMPCDCDPDGSLDGGMCDGREESSLGALAGQ
CRCKEHVQGARCDQCKAGYYGLSAANPQGCQPCWCDPRGTVLRPVTRDPVTGDCFCKRLV
TGRRCDQCVGEHWGLSHDVSGCRTCDCDLGGAHDNQCSMETGQCRCRDHLTGRRCDGVQS
GHYLPALDHLTYEGELAQHGTGVTVVSRQRLGPEPVTWTGAGFAQVLVGGVLEFRVDDVP
NSMEYDVVIRYEPQLRGEWERLVVSVKRPGPIPTSSPCGNTIPADDILTARLLQTPWYVV
LPQPVCLERGVIYTLRLHFQHYSARERVPNASILLDSIVLVPRYSSLEMFIAGDAASIAR
KETFERYRCHGNSIILGPPAVPQHCQPLIDSMAALVYHGAQLCRCDLQGSMSSECRPRGG
QCQCKANVMGQRCHSCSPGTFGFGPAGCRACRCDPEGSVGPQCDPVGGQCQCRSGAFGSQ
CGQCQRGHWGFPTCRLCQCHGHAEECESHTGACQGCRHHTSGTHCQQXVCPPGYYGNPEL
GAGGQCRPCPCPGGPGSDRNFATSCRLDGHSGQLVCECQAGHTGPRCQECAPGYYGNPLL
PGGRCAPCQCHGNVAAGDPRACDRETGRCLRCLYHTEGAQCQLCRRGYHGDARRRSCRKC
TCNVLGTASGHCPPQEGCECDRTTGQCPCLPNVTGQNCDRCTPDHWNLAGGSGCQLCRCA
TTNVFSATCNEVSGQCQCRPGFGGQTCTDCQENHWGDPNVHCRVCDCDEQGVQSGQCDRA
TGHCACRPGVSGVRCDACARGFSGEFPVCQVCHACFGDWDRLVQDLAAQTRDLARRAADI
RLSGISALYDKNFRELEEKLRRAQQIVSARNTTAAAIAGLMQLINELRERVSGTTDTLDG
LEGTLTAVQQQNGGASVELGHLERDVLALNMSARYLGRQLDKLRHANFLGAYDSISQSYR
QSWQAEWAVNASTVAVPCTVSESLGTRRRVELLLRARKDDFHRKNAANRRALNDLSAKVQ
TLSLENVNEKVCGLPGNLPCADSPCGGAGCYEDDGTRRCGGLNCNGAVAVADTALGRARQ
SEQEIRQAMNEVEELFNKVAEAKVRANEAKRKAQGTLDKANDAKDRISHSNKELRDLIRQ
IRDFLTQEGADPDSIEEVATQVMNIHIPANPQQIRYLAEEIKDRVSSLSNVDDILDQTAD
DVRKAGELLQDARRARGRAENVKQTAEAVKRALEEAGRAQAAADTAIQQARGDIEDSERV
LNEIRGETAGAERELMKAMDQLTQLDGRIDALRMKRANNSLVATRARDTAGQARDKANEA
KQILDGLLKDKYKTAQGLIDRKSGTVFNAKHKAESLRDEAKELLTDAQVKLERLNDLEGA
YKINEQVLERKARQLDGLEEKMKEILKAINQQIQIYNTCQ
NT seq
5343 nt
NT seq
+upstream
nt +downstream
nt
atgaacctcttcatcctgctcgtttgcgtgatggggggcaccgttgcccaggctccggac
gctgcccacggctgtgcccaaggcagctgctacccagcaacgggggacctactggtgggc
cggcagcgcaagctgaccgcatcgtccacctgcgggctacgtggcaaacagcgctactgt
atcgtcagccacctgcaggatgagaagaagtgcttcctgtgcgactcgcgcaggtcatac
gaccggctacagaaccccaacagtcaccgcgtgcggaacgtgatcaccgcattcacacag
taccgcaaggaggcgtggtggcagtccgagaacggtgtttctgacgtccatctccagctg
gacctggaggcagagttccacttcacccacctcatcatgacattcaagacgttccggcca
gcgtccatgctgattgagcggtcagcagactttggccgctcctggcaggtttaccgctac
ttcagccacgactgcgcgacggactctcccggcgtccggcgtggcccacagcgggaggtc
gacgaggtcatctgcgagtcccgctactcagatatcgagccctccaccgagggggaggtg
atcttcagagtgctgaacccagccattgccatcgaggatccctacagcccccgcatccag
aatctgttgaagatcaccaacctgagggtgaacttcaccaagctgcggacgctgggtgac
aatctgctggatacgcggcgtgagatcaaggagaagtactactacgctttgtacgagctg
gtggtgcgcggcaactgcttctgctatggccacgccagcgagtgcgcgcccattgccggc
gtccctggcaacatcgagggcatggtacacgggaggtgcgtgtgtaaccacaacacacat
gggctgaactgcgagaaatgtgcagacttctacaacgagcgtccctggaggccggctgag
ggccgaaacaccaacgcatgcaaacgctgcgactgcaacaaccactctgcccgctgccac
ttcgacatggcggtgttcctggcaacgggcaatgccagcggcggcgtgtgtgacgactgt
ttccacaacaccatgggcaagaactgcgagatgtgcaaaccattctactaccaccacccg
tcccgggacatgcgtgacccacgcgtgtgcatgccctgtgactgtgacccggacggctcg
ctggacggagggatgtgtgacggacgtgaggagtcctcgctgggagcgctggccgggcag
tgtcggtgcaaggagcacgtgcagggagcacgttgtgaccagtgcaaggccggctactac
ggactcagtgcagccaacccacagggctgtcagccttgctggtgcgacccccgtgggacg
gtgcttcgccctgtgacccgtgaccccgtcactggcgactgcttctgcaagaggctggtg
accgggcggcgctgtgaccagtgtgtgggggaacactgggggctgagccacgatgtcagc
ggctgccggacctgtgactgcgacctgggtggagcgcacgacaaccagtgctcgatggag
acgggtcagtgccggtgccgggaccatctgacgggccggcggtgtgacggtgtgcagtcc
ggccactacctgcctgcgcttgaccacctcacgtacgagggggagctggcccagcacggc
accggggtgacggtggtttcgcggcagcgcctggggccggagccggtgacctggacgggt
gccggctttgcccaggtgctggtgggcggagtgctggagttccgggtggacgacgttccc
aactccatggagtacgacgtggtgatccgctacgagccgcagctgcgaggggagtgggag
aggctggtggtctcagtgaagaggccgggacccatccccaccagcagcccgtgcggtaac
accatccctgccgacgacatccttaccgcccgcctgctgcaaacaccctggtatgtggtg
ctcccacagcccgtgtgcctggagcggggggtaatctacaccctgcggctccacttccag
cactactccgccagggagcgggttcccaacgccagcatcctgctcgactcgatagtcctg
gtccctcgttactcctcgctggagatgttcatcgctggggacgctgcctccatcgccagg
aaggagaccttcgagcgctaccgttgccatggcaacagcatcatcctgggccccccggcc
gtgccccagcactgccagccgctcatcgacagtatggccgctctggtgtaccacggcgca
cagctgtgccgctgtgacctccagggctcgatgagctcggagtgccgtccgcggggcggg
caatgccagtgcaaggccaacgtgatgggtcaacggtgccacagctgcagccccggcacc
ttcggctttggacccgccggctgcagggcgtgccgctgtgatccagaggggtcagtgggg
ccacagtgtgacccagtcggcggtcagtgccagtgccggtcaggggcgttcggctcccag
tgcggtcagtgccagcgggggcactggggattccccacctgccgactctgccagtgccac
gggcacgccgaggagtgtgagtcccacactggagcctgccagggctgccggcaccacacc
agcggcacacactgccagcagtaagtgtgcccccccggttactatgggaacccggagctg
ggtgcaggggggcagtgccgtccatgcccgtgtccgggtggtccgggcagtgaccgcaac
tttgccacctcttgtcggctggacgggcacagcgggcagctggtgtgtgagtgccaggcc
ggacacacaggcccccgatgccaggagtgtgcgcccggttactatggaaaccccttgttg
ccagggggccggtgtgctccgtgccagtgccatggcaacgttgccgcgggcgatcctcgg
gcctgtgaccgggagacgggccggtgtctgaggtgcctgtaccacacggagggtgcgcag
tgccaactctgccggcggggttaccacggcgatgcccggcgacgctcctgccgcaagtgt
acctgcaatgtgctgggcactgccagcggccattgtccgccacaggaggggtgtgagtgt
gaccggaccaccgggcagtgtccgtgcctgcccaacgtcaccggccagaactgtgaccgc
tgcacccctgaccactggaacctggccggtgggtccggctgccagctctgccgctgcgcc
accaccaacgtattctccgcaacctgcaacgaggtgagcgggcagtgccagtgtcgtcct
ggctttgggggccagacctgcaccgactgccaggagaatcactggggtgaccccaacgtg
cattgtcgagtgtgtgactgtgatgaacagggggtgcagagtggtcagtgtgaccgtgct
actggtcactgtgcctgtcgtccaggcgtgtcgggtgtgcgctgcgacgcgtgtgcccgc
ggcttctcgggggagtttcccgtgtgccaggtgtgccacgcgtgctttggggactgggac
cggctggtgcaggacctggcggcgcagacccgtgacctggcgcggcgggccgccgacatc
cggctatctggcatcagcgctctctacgacaagaacttccgggagctggaggagaagctg
cggcgggcgcaacaaatagtcagcgcccgcaacaccaccgcagccgccatcgcagggctg
atgcagctgatcaacgagctgcgggagagggtgagtgggacgacggacacgctggacggg
ctggaggggacgctgacggcggtgcagcagcagaacgggggggccagcgtggagctgggg
cacctggagcgagacgtcctcgccctcaacatgtccgcccgctacctgggccgccagctc
gacaaactcaggcacgccaacttcctgggtgcctacgacagcatcagccagtcgtaccgg
cagtcctggcaggcggagtgggcggtgaatgcctccactgtggccgtgccctgcacggtc
agtgaatcgttgggcacccgccgccgtgtcgagctactgctccgggcgaggaaggacgac
ttccaccgcaagaatgccgccaaccggcgcgcgctcaacgacctcagcgccaaggtgcag
acactcagcctggagaacgtcaacgagaaggtgtgcggtctccccggtaacctgccgtgt
gcggacagtccctgcggtggggccggctgctacgaggacgacggcactcggcgctgcggc
ggcctgaactgcaacggtgcagtggcggtggcagatacggcgctgggccgcgcacgtcag
tccgagcaagagatccggcaggccatgaacgaggtggaggagctcttcaacaaggtggcc
gaggccaaggtgagggcgaatgaggcaaagcggaaagcccagggaacgctggacaaagcc
aatgatgccaaggacaggatcagtcactccaacaaagagctgcgtgatctcattcggcaa
atccgagacttcctcacacaggagggagcagatcccgacagcattgaggaggtggccacc
caggtcatgaacatccacatccccgctaacccacagcagatccgttaccttgccgaagag
atcaaggacagggtgagcagcttgtccaacgtggatgacatcctggaccagaccgcggac
gatgtgagaaaagcaggagaactccttcaggacgctaggagggcccggggccgtgccgag
aacgtgaagcagacggcggaggcggtgaagcgggccctggaggaagcaggccgggcccag
gctgctgccgacaccgccatccagcaggcccggggagacatcgaggacagcgagcgggtg
ctcaatgagatccgtggtgagactgcgggtgcggagcgggagctgatgaaggcaatggac
cagctgacccagctggacggcaggatcgacgcgctcaggatgaagcgagccaacaactct
ttggtggccacgcgggcacgggacacggccggccaggcccgggacaaagccaacgaggcc
aagcagattttggacgggctgctgaaggacaaatacaaaacggcgcagggactgatagac
cgcaagagcggcaccgtgttcaacgccaaacacaaggctgagagccttcgcgacgaggcc
aaggagctgctgacagacgcacaggtcaaactcgagaggctgaacgatctcgagggtgct
tacaaaatcaatgagcaggttttggaaagaaaggcacggcagctggacggactggaggag
aagatgaaagagatattgaaagccattaatcaacagatccagatctacaacacctgccaa
taa
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